RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 A0A1W2PRG0 241 aa21.32■■□□□ 1
SFXN1-212ENST00000515791 CCL5P13501 91 aa21.32■■□□□ 1
SFXN1-212ENST00000515791 SIAH1Q8IUQ4 282 aa21.32■■□□□ 1
SFXN1-212ENST00000515791 OTUD7AQ8TE49 926 aaPredicted RBP21.32■■□□□ 1
SFXN1-212ENST00000515791 COA7Q96BR5 231 aa21.32■■□□□ 1
SFXN1-212ENST00000515791 CRBNQ96SW2 442 aa21.32■■□□□ 1
SFXN1-212ENST00000515791 SALL3Q9BXA9 1300 aa21.31■■□□□ 1
SFXN1-212ENST00000515791 GJB1P08034 283 aa21.31■■□□□ 1
SFXN1-212ENST00000515791 GJA8P48165 433 aa21.31■■□□□ 1
SFXN1-212ENST00000515791 ZYXQ15942 572 aaKnown RBP21.31■■□□□ 1
SFXN1-212ENST00000515791 ZSCAN25Q6NSZ9 544 aa21.31■■□□□ 1
SFXN1-212ENST00000515791 CATSPERGQ6ZRH7 1159 aa21.31■■□□□ 1
SFXN1-212ENST00000515791 UBE2Q1Q7Z7E8 422 aa21.31■■□□□ 1
SFXN1-212ENST00000515791 PI4K2BQ8TCG2 481 aa21.31■■□□□ 1
SFXN1-212ENST00000515791 STRBPQ96SI9 672 aaKnown RBP21.31■■□□□ 1
SFXN1-212ENST00000515791 CABP5Q9NP86 173 aa21.31■■□□□ 1
SFXN1-212ENST00000515791 SWAP70Q9UH65 585 aa21.31■■□□□ 1
SFXN1-212ENST00000515791 USP17L12C9JPN9 530 aa21.3■■□□□ 1
SFXN1-212ENST00000515791 USP17L21D6R901 530 aa21.3■■□□□ 1
SFXN1-212ENST00000515791 CNMDO75829 334 aa21.3■■□□□ 1
SFXN1-212ENST00000515791 VCAM1P19320 739 aa21.3■■□□□ 1
SFXN1-212ENST00000515791 USP14P54578 494 aa21.3■■□□□ 1
SFXN1-212ENST00000515791 CTR9Q6PD62 1173 aa21.3■■□□□ 1
SFXN1-212ENST00000515791 OSBP2Q969R2 916 aa21.3■■□□□ 1
SFXN1-212ENST00000515791 UNC93B1Q9H1C4 597 aa21.3■■□□□ 1
SFXN1-212ENST00000515791 USP17L15C9J2P7 530 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 USP17L13C9JLJ4 530 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 USP17L11C9JVI0 530 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 USP17L18D6R9N7 530 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 USP17L22D6RA61 530 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 USP17L17D6RBQ6 530 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 USP17L19D6RCP7 530 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 USP17L20D6RJB6 530 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 INHAP05111 366 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 UBXN2AP68543 259 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 USP17L24Q0WX57 530 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 C16orf86Q6ZW13 317 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 GPRC5AQ8NFJ5 357 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 FEZ1Q99689 392 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 SLC4A4Q9Y6R1 1079 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 MYH8P13535 1937 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 TTC41PQ6P2S7 1318 aa21.29■■□□□ 1
SFXN1-212ENST00000515791 RLFQ13129 1914 aa21.28■■□□□ 1
SFXN1-212ENST00000515791 AKR1B1P15121 316 aa21.28■■□□□ 1
SFXN1-212ENST00000515791 CDK8P49336 464 aa21.28■■□□□ 1
SFXN1-212ENST00000515791 ERVK-9P63128 1117 aa21.28■■□□□ 1
SFXN1-212ENST00000515791 ERVK-24P63145 666 aa21.28■■□□□ 1
SFXN1-212ENST00000515791 KIAA1755Q5JYT7 1200 aa21.28■■□□□ 1
SFXN1-212ENST00000515791 LBX2Q6XYB7 198 aa21.28■■□□□ 1
SFXN1-212ENST00000515791 TMEM179Q6ZVK1 233 aa21.28■■□□□ 1
SFXN1-212ENST00000515791 USP6NLQ92738 828 aa21.28■■□□□ 1
SFXN1-212ENST00000515791 RNF208Q9H0X6 261 aa21.28■■□□□ 1
SFXN1-212ENST00000515791 PORCNQ9H237 461 aa21.28■■□□□ 1
SFXN1-212ENST00000515791 BIN2Q9UBW5 565 aaPredicted RBP21.28■■□□□ 1
SFXN1-212ENST00000515791 GSG1L2A8MUP6 293 aa21.27■■□□□ 1
SFXN1-212ENST00000515791 RNF113AO15541 343 aaKnown RBP21.27■■□□□ 1
SFXN1-212ENST00000515791 GTF3C2Q8WUA4 911 aaPredicted RBP21.27■■□□□ 1
SFXN1-212ENST00000515791 APPBP2Q92624 585 aa21.27■■□□□ 1
SFXN1-212ENST00000515791 GPATCH3Q96I76 525 aa21.27■■□□□ 1
SFXN1-212ENST00000515791 PAK6Q9NQU5 681 aaPredicted RBP21.27■■□□□ 1
SFXN1-212ENST00000515791 SBK1Q52WX2 424 aa21.26■□□□□ 0.99
SFXN1-212ENST00000515791 CLEC10AQ8IUN9 316 aa21.26■□□□□ 0.99
SFXN1-212ENST00000515791 NKX2-3Q8TAU0 364 aa21.26■□□□□ 0.99
SFXN1-212ENST00000515791 RABGAP1Q9Y3P9 1069 aa21.26■□□□□ 0.99
SFXN1-212ENST00000515791 GREB1LQ9C091 1923 aaPredicted RBP21.25■□□□□ 0.99
SFXN1-212ENST00000515791 MPHOSPH10O00566 681 aaKnown RBP21.25■□□□□ 0.99
SFXN1-212ENST00000515791 SGPL1O95470 568 aa21.25■□□□□ 0.99
SFXN1-212ENST00000515791 TRIM32Q13049 653 aa21.25■□□□□ 0.99
SFXN1-212ENST00000515791 HDAC1Q13547 482 aaPredicted RBP21.25■□□□□ 0.99
SFXN1-212ENST00000515791 GIMAP6Q6P9H5 292 aa21.25■□□□□ 0.99
SFXN1-212ENST00000515791 U2AF1L4Q8WU68 220 aaKnown RBP21.25■□□□□ 0.99
SFXN1-212ENST00000515791 YTHDC1Q96MU7 727 aaKnown RBP21.25■□□□□ 0.99
SFXN1-212ENST00000515791 PAGR1Q9BTK6 254 aa21.25■□□□□ 0.99
SFXN1-212ENST00000515791 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.25■□□□□ 0.99
SFXN1-212ENST00000515791 RPAP3Q9H6T3 665 aaPredicted RBP21.25■□□□□ 0.99
SFXN1-212ENST00000515791 EPB41L4AQ9HCS5 686 aaPredicted RBP21.25■□□□□ 0.99
SFXN1-212ENST00000515791 BTBD7Q9P203 1132 aa21.25■□□□□ 0.99
SFXN1-212ENST00000515791 A0A0G2JMZ2 1700 aa21.24■□□□□ 0.99
SFXN1-212ENST00000515791 SPDYE16A6NNV3 312 aaPredicted RBP21.24■□□□□ 0.99
SFXN1-212ENST00000515791 M0R2C6 588 aa21.24■□□□□ 0.99
SFXN1-212ENST00000515791 ZFYP08048 801 aaPredicted RBP21.24■□□□□ 0.99
SFXN1-212ENST00000515791 MAPK4P31152 587 aa21.24■□□□□ 0.99
SFXN1-212ENST00000515791 MORN1Q5T089 497 aa21.24■□□□□ 0.99
SFXN1-212ENST00000515791 TRIB2Q92519 343 aa21.24■□□□□ 0.99
SFXN1-212ENST00000515791 CCDC17Q96LX7 622 aa21.24■□□□□ 0.99
SFXN1-212ENST00000515791 TMX2Q9Y320 296 aa21.24■□□□□ 0.99
SFXN1-212ENST00000515791 GPAA1O43292 621 aa21.23■□□□□ 0.99
SFXN1-212ENST00000515791 GLRX3O76003 335 aaKnown RBP21.23■□□□□ 0.99
SFXN1-212ENST00000515791 XRCC5P13010 732 aaKnown RBP21.23■□□□□ 0.99
SFXN1-212ENST00000515791 GPR142Q7Z601 462 aa21.23■□□□□ 0.99
SFXN1-212ENST00000515791 CRISPLD2Q9H0B8 497 aa21.23■□□□□ 0.99
SFXN1-212ENST00000515791 ARPP21Q9UBL0 812 aaPredicted RBP21.23■□□□□ 0.99
SFXN1-212ENST00000515791 ROBO3Q96MS0 1386 aa21.23■□□□□ 0.99
SFXN1-212ENST00000515791 PARP14Q460N5 1801 aa21.22■□□□□ 0.99
SFXN1-212ENST00000515791 HMGCRP04035 888 aa21.22■□□□□ 0.99
SFXN1-212ENST00000515791 MX1P20591 662 aa21.22■□□□□ 0.99
SFXN1-212ENST00000515791 MAP3K21Q5TCX8 1036 aa21.22■□□□□ 0.99
SFXN1-212ENST00000515791 SEC62Q99442 399 aaKnown RBP21.22■□□□□ 0.99
SFXN1-212ENST00000515791 NUDT12Q9BQG2 462 aa21.22■□□□□ 0.99
SFXN1-212ENST00000515791 ERC2O15083 957 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms