RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 TROAPQ12815 778 aa10.59□□□□□ -0.71
NR1I3-234ENST00000515621 NECAB1Q8N987 351 aa10.59□□□□□ -0.71
NR1I3-234ENST00000515621 KCNV2Q8TDN2 545 aa10.59□□□□□ -0.71
NR1I3-234ENST00000515621 TNPO1Q92973 898 aaKnown RBP10.59□□□□□ -0.71
NR1I3-234ENST00000515621 MYOZ2Q9NPC6 264 aa10.59□□□□□ -0.71
NR1I3-234ENST00000515621 ADAMTSL1Q8N6G6 1762 aa10.59□□□□□ -0.71
NR1I3-234ENST00000515621 IGKV6D-41A0A0C4DH26 115 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 TBC1D12O60347 775 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 CTDNEP1O95476 244 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 SMARCA1P28370 1054 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 GNAQP50148 359 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 RASSF7Q02833 373 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 NFIAQ12857 509 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 STK3Q13188 491 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 PICALMQ13492 652 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 RTN1Q16799 776 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 LARP1BQ659C4 914 aaKnown RBP10.58□□□□□ -0.72
NR1I3-234ENST00000515621 ATL3Q6DD88 541 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 RCSD1Q6JBY9 416 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 TATDN1Q6P1N9 297 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 TRIM22Q8IYM9 498 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 FAM184AQ8NB25 1140 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 FANCBQ8NB91 859 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 HOOK2Q96ED9 719 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 PRMT6Q96LA8 375 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-234ENST00000515621 LZTS2Q9BRK4 669 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 RNF26Q9BY78 433 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-234ENST00000515621 ZSCAN16Q9H4T2 348 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-234ENST00000515621 KAT14Q9H8E8 782 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 GINM1Q9NU53 330 aa10.58□□□□□ -0.72
NR1I3-234ENST00000515621 ZNF70Q9UC06 446 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-234ENST00000515621 SAP30BPQ9UHR5 308 aaKnown RBP10.58□□□□□ -0.72
NR1I3-234ENST00000515621 GREB1LQ9C091 1923 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-234ENST00000515621 WNT10BO00744 389 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 PRDM1O75626 825 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 TOP1P11387 765 aaKnown RBP10.57□□□□□ -0.72
NR1I3-234ENST00000515621 MAP3K10Q02779 954 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 NTRK3Q16288 839 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 MICU3Q86XE3 530 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 FBXO22Q8NEZ5 403 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 CTCFLQ8NI51 663 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-234ENST00000515621 DYNLL2Q96FJ2 89 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 LARP6Q9BRS8 491 aaKnown RBP10.57□□□□□ -0.72
NR1I3-234ENST00000515621 TRIM34Q9BYJ4 488 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 TDRD3Q9H7E2 651 aaKnown RBP10.57□□□□□ -0.72
NR1I3-234ENST00000515621 INCENPQ9NQS7 918 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 GPHNQ9NQX3 736 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-234ENST00000515621 MTMR6Q9Y217 621 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 ZDHHC9Q9Y397 364 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 PPP2R3BQ9Y5P8 575 aa10.57□□□□□ -0.72
NR1I3-234ENST00000515621 TULP1O00294 542 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-234ENST00000515621 GRIN3BO60391 1043 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 DEXIO95424 95 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 FMNL1O95466 1100 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-234ENST00000515621 F13A1P00488 732 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 MCM4P33991 863 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 SHMT1P34896 483 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 GMPSP49915 693 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-234ENST00000515621 PRELPP51888 382 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 NFKBIBQ15653 356 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 ARHGAP27Q6ZUM4 889 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 TMEM179Q6ZVK1 233 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-234ENST00000515621 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 PHF12Q96QT6 1004 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 NCOA5Q9HCD5 579 aaKnown RBP10.56□□□□□ -0.72
NR1I3-234ENST00000515621 IL17RBQ9NRM6 502 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 FAM217BQ9NTX9 383 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-234ENST00000515621 MTMR4Q9NYA4 1195 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 NAP1L2Q9ULW6 460 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-234ENST00000515621 PITPNM2Q9BZ72 1349 aa10.56□□□□□ -0.72
NR1I3-234ENST00000515621 CNTNAP1P78357 1384 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 H7C1D1 291 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 SMIM22K7EJ46 135 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 JAK2O60674 1132 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 PPP1R37O75864 691 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 TTLL1O95922 423 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 CDC27P30260 824 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 CCT2P78371 535 aaKnown RBP10.55□□□□□ -0.72
NR1I3-234ENST00000515621 SSRP1Q08945 709 aaKnown RBP10.55□□□□□ -0.72
NR1I3-234ENST00000515621 FAM47AQ5JRC9 791 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 SH3BP5LQ7L8J4 393 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 APOBEC3FQ8IUX4 373 aaKnown RBP10.55□□□□□ -0.72
NR1I3-234ENST00000515621 ZSCAN29Q8IWY8 852 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-234ENST00000515621 MICALL2Q8IY33 904 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 CSRNP1Q96S65 589 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 ZKSCAN3Q9BRR0 538 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 KANSL2Q9H9L4 492 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 GPRC5DQ9NZD1 345 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 NYAP2Q9P242 653 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 ORC3Q9UBD5 711 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-234ENST00000515621 CNOT7Q9UIV1 285 aaKnown RBP10.55□□□□□ -0.72
NR1I3-234ENST00000515621 SIPA1L1O43166 1804 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 ZNF541Q9H0D2 1346 aa10.55□□□□□ -0.72
NR1I3-234ENST00000515621 DDTLA6NHG4 134 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-234ENST00000515621 H3BQV1 296 aa10.54□□□□□ -0.72
NR1I3-234ENST00000515621 hCG_1984214I3L0E3 225 aa10.54□□□□□ -0.72
NR1I3-234ENST00000515621 PRPF3O43395 683 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms