RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 ARHGEF10LQ9HCE6 1279 aa30.85■■■□□ 2.53
DDR1-279ENST00000515529 GUCY1A2P33402 732 aa30.84■■■□□ 2.53
DDR1-279ENST00000515529 USP14P54578 494 aa30.84■■■□□ 2.53
DDR1-279ENST00000515529 ICA1Q05084 483 aa30.84■■■□□ 2.53
DDR1-279ENST00000515529 PABPC4Q13310 644 aaKnown RBP eCLIP30.84■■■□□ 2.53
DDR1-279ENST00000515529 SH3D19Q5HYK7 790 aa30.84■■■□□ 2.53
DDR1-279ENST00000515529 USP17L2Q6R6M4 530 aa30.84■■■□□ 2.53
DDR1-279ENST00000515529 PARK7Q99497 189 aaKnown RBP30.84■■■□□ 2.53
DDR1-279ENST00000515529 CTNNA3Q9UI47 895 aa30.84■■■□□ 2.53
DDR1-279ENST00000515529 ANAPC4Q9UJX5 808 aa30.84■■■□□ 2.53
DDR1-279ENST00000515529 AGTPBP1Q9UPW5 1226 aa30.84■■■□□ 2.53
DDR1-279ENST00000515529 ZYXQ15942 572 aaKnown RBP30.83■■■□□ 2.53
DDR1-279ENST00000515529 GPAT2Q6NUI2 795 aa30.83■■■□□ 2.53
DDR1-279ENST00000515529 CASC1Q6TDU7 716 aa30.83■■■□□ 2.53
DDR1-279ENST00000515529 KANSL2Q9H9L4 492 aa30.83■■■□□ 2.53
DDR1-279ENST00000515529 SLC45A1Q9Y2W3 748 aa30.83■■■□□ 2.53
DDR1-279ENST00000515529 GPR25O00155 361 aa30.82■■■□□ 2.52
DDR1-279ENST00000515529 SH2D4AQ9H788 454 aa30.82■■■□□ 2.52
DDR1-279ENST00000515529 TOMM22Q9NS69 142 aa30.82■■■□□ 2.52
DDR1-279ENST00000515529 PNMA3Q9UL41 463 aa30.82■■■□□ 2.52
DDR1-279ENST00000515529 PTPRFP10586 1907 aa30.81■■■□□ 2.52
DDR1-279ENST00000515529 ZNF213O14771 459 aa30.81■■■□□ 2.52
DDR1-279ENST00000515529 SGSM2O43147 1006 aa30.81■■■□□ 2.52
DDR1-279ENST00000515529 TSPY3P0CV98 308 aa30.81■■■□□ 2.52
DDR1-279ENST00000515529 TSPY8P0CW00 308 aa30.81■■■□□ 2.52
DDR1-279ENST00000515529 HAND2P61296 217 aa30.81■■■□□ 2.52
DDR1-279ENST00000515529 ATP2B2Q01814 1243 aa30.81■■■□□ 2.52
DDR1-279ENST00000515529 ACER1Q8TDN7 264 aa30.81■■■□□ 2.52
DDR1-279ENST00000515529 R3HDMLQ9H3Y0 253 aa30.81■■■□□ 2.52
DDR1-279ENST00000515529 NOM1Q5C9Z4 860 aaKnown RBP30.8■■■□□ 2.52
DDR1-279ENST00000515529 TREML2Q5T2D2 321 aa30.8■■■□□ 2.52
DDR1-279ENST00000515529 KIAA1683Q9H0B3 1180 aa30.8■■■□□ 2.52
DDR1-279ENST00000515529 IL25Q9H293 177 aa30.8■■■□□ 2.52
DDR1-279ENST00000515529 OSBPP22059 807 aa30.79■■■□□ 2.52
DDR1-279ENST00000515529 DGKZQ13574 1117 aa30.79■■■□□ 2.52
DDR1-279ENST00000515529 IMMTQ16891 758 aaKnown RBP30.79■■■□□ 2.52
DDR1-279ENST00000515529 KIAA1211Q6ZU35 1233 aa30.79■■■□□ 2.52
DDR1-279ENST00000515529 FKTNO75072 461 aa30.78■■■□□ 2.52
DDR1-279ENST00000515529 CLEC10AQ8IUN9 316 aa30.78■■■□□ 2.52
DDR1-279ENST00000515529 SMCR8Q8TEV9 937 aaPredicted RBP30.78■■■□□ 2.52
DDR1-279ENST00000515529 RNF41Q9H4P4 317 aaPredicted RBP30.78■■■□□ 2.52
DDR1-279ENST00000515529 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.78■■■□□ 2.52
DDR1-279ENST00000515529 TSPY2A6NKD2 308 aa30.77■■■□□ 2.52
DDR1-279ENST00000515529 TLR2O60603 784 aa30.77■■■□□ 2.52
DDR1-279ENST00000515529 CDC45O75419 566 aa30.77■■■□□ 2.52
DDR1-279ENST00000515529 TFAP4Q01664 338 aa30.77■■■□□ 2.52
DDR1-279ENST00000515529 MFSD6Q6ZSS7 791 aa30.77■■■□□ 2.52
DDR1-279ENST00000515529 ZNF296Q8WUU4 475 aaPredicted RBP30.77■■■□□ 2.52
DDR1-279ENST00000515529 EMILIN3Q9NT22 766 aa30.77■■■□□ 2.52
DDR1-279ENST00000515529 LOC285556D6RIA3 1793 aa30.77■■■□□ 2.52
DDR1-279ENST00000515529 RANBP6O60518 1105 aaKnown RBP30.76■■■□□ 2.51
DDR1-279ENST00000515529 CYP2C8P10632 490 aa30.76■■■□□ 2.51
DDR1-279ENST00000515529 PCP11498 1178 aaKnown RBP30.76■■■□□ 2.51
DDR1-279ENST00000515529 EEF2P13639 858 aaKnown RBP30.76■■■□□ 2.51
DDR1-279ENST00000515529 IRX3P78415 501 aaPredicted RBP30.76■■■□□ 2.51
DDR1-279ENST00000515529 FAM47AQ5JRC9 791 aa30.76■■■□□ 2.51
DDR1-279ENST00000515529 RRP12Q5JTH9 1297 aaKnown RBP30.76■■■□□ 2.51
DDR1-279ENST00000515529 C12orf42Q96LP6 360 aa30.76■■■□□ 2.51
DDR1-279ENST00000515529 ORC4O43929 436 aa30.75■■■□□ 2.51
DDR1-279ENST00000515529 PPP4R3BQ5MIZ7 849 aa30.75■■■□□ 2.51
DDR1-279ENST00000515529 AKNAD1Q5T1N1 836 aa30.75■■■□□ 2.51
DDR1-279ENST00000515529 NEDD1Q8NHV4 660 aa30.75■■■□□ 2.51
DDR1-279ENST00000515529 ESYT1Q9BSJ8 1104 aa30.75■■■□□ 2.51
DDR1-279ENST00000515529 INCENPQ9NQS7 918 aa30.75■■■□□ 2.51
DDR1-279ENST00000515529 A0A1W2PRG0 241 aa30.74■■■□□ 2.51
DDR1-279ENST00000515529 STAG1Q8WVM7 1258 aa30.74■■■□□ 2.51
DDR1-279ENST00000515529 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.74■■■□□ 2.51
DDR1-279ENST00000515529 TMX2Q9Y320 296 aa30.74■■■□□ 2.51
DDR1-279ENST00000515529 U3KPZ7 1027 aaPredicted RBP30.74■■■□□ 2.51
DDR1-279ENST00000515529 RAD21O60216 631 aa30.73■■■□□ 2.51
DDR1-279ENST00000515529 SP3Q02447 781 aa30.73■■■□□ 2.51
DDR1-279ENST00000515529 GOPCQ9HD26 462 aa30.73■■■□□ 2.51
DDR1-279ENST00000515529 NYAP2Q9P242 653 aa30.73■■■□□ 2.51
DDR1-279ENST00000515529 CPA4Q9UI42 421 aa30.73■■■□□ 2.51
DDR1-279ENST00000515529 PLIN4Q96Q06 1357 aa30.72■■■□□ 2.51
DDR1-279ENST00000515529 FGRP09769 529 aa30.72■■■□□ 2.51
DDR1-279ENST00000515529 VCAM1P19320 739 aa30.72■■■□□ 2.51
DDR1-279ENST00000515529 HOXA7P31268 230 aaPredicted RBP30.72■■■□□ 2.51
DDR1-279ENST00000515529 PTH1RQ03431 593 aa30.72■■■□□ 2.51
DDR1-279ENST00000515529 TBC1D10CQ8IV04 446 aa30.72■■■□□ 2.51
DDR1-279ENST00000515529 ERO1AQ96HE7 468 aa30.72■■■□□ 2.51
DDR1-279ENST00000515529 ASCC2Q9H1I8 757 aaPredicted RBP30.72■■■□□ 2.51
DDR1-279ENST00000515529 CASP8AP2Q9UKL3 1982 aa30.72■■■□□ 2.51
DDR1-279ENST00000515529 USP17L15C9J2P7 530 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 USP17L13C9JLJ4 530 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 USP17L11C9JVI0 530 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 USP17L18D6R9N7 530 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 USP17L22D6RA61 530 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 USP17L17D6RBQ6 530 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 USP17L19D6RCP7 530 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 USP17L20D6RJB6 530 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 USP17L24Q0WX57 530 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 COL13A1Q5TAT6 717 aaPredicted RBP30.71■■■□□ 2.51
DDR1-279ENST00000515529 SIAH1Q8IUQ4 282 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 LPAR1Q92633 364 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 CEP95Q96GE4 821 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 VCPKMTQ9H867 229 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 CLIP2Q9UDT6 1046 aa30.71■■■□□ 2.51
DDR1-279ENST00000515529 IGKV6D-41A0A0C4DH26 115 aa30.7■■■□□ 2.51
DDR1-279ENST00000515529 TTLL1O95922 423 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms