RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 ZMYM4Q5VZL5 1548 aa16.08■□□□□ 0.16
TRIO-222ENST00000515144 SNX14Q9Y5W7 946 aa16.08■□□□□ 0.16
TRIO-222ENST00000515144 CDC42BPBQ9Y5S2 1711 aa16.08■□□□□ 0.16
TRIO-222ENST00000515144 MCM3P25205 808 aa16.08■□□□□ 0.16
TRIO-222ENST00000515144 CYP2J2P51589 502 aa16.08■□□□□ 0.16
TRIO-222ENST00000515144 SLC16A2P36021 539 aa16.08■□□□□ 0.16
TRIO-222ENST00000515144 KDRP35968 1356 aa16.08■□□□□ 0.16
TRIO-222ENST00000515144 TYRO3Q06418 890 aa16.08■□□□□ 0.16
TRIO-222ENST00000515144 PDCL2Q8N4E4 241 aa16.08■□□□□ 0.16
TRIO-222ENST00000515144 GBP3Q9H0R5 595 aa16.08■□□□□ 0.16
TRIO-222ENST00000515144 CACNB3P54284 484 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 GNPTABQ3T906 1256 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 IFNL3Q8IZI9 196 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 SEPT9Q9UHD8 586 aaPredicted RBP16.07■□□□□ 0.16
TRIO-222ENST00000515144 ARHGEF5Q12774 1597 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 STK25O00506 426 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 ATP2C2O75185 946 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 KIF5AQ12840 1032 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 CERS3Q8IU89 383 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 BEND3Q5T5X7 828 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 CNNM4Q6P4Q7 775 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 TTLL6Q8N841 843 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 LEO1Q8WVC0 666 aaPredicted RBP16.07■□□□□ 0.16
TRIO-222ENST00000515144 ST7Q9NRC1 585 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 MYOM2P54296 1465 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 PLEKHG1Q9ULL1 1385 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
TRIO-222ENST00000515144 GEN1Q17RS7 908 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 BRINP3Q76B58 766 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 FBXO11Q86XK2 927 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 POLGP54098 1239 aaPredicted RBP16.07■□□□□ 0.16
TRIO-222ENST00000515144 DEPTORQ8TB45 409 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 ZSCAN10Q96SZ4 725 aaPredicted RBP16.07■□□□□ 0.16
TRIO-222ENST00000515144 PTPRTO14522 1441 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 CBX1P83916 185 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 ARHGAP44Q17R89 818 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 IFT81Q8WYA0 676 aa16.07■□□□□ 0.16
TRIO-222ENST00000515144 CD19P15391 556 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 POLR2MP0CAP2 368 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 HACE1Q8IYU2 909 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 ZNF277Q9NRM2 450 aaPredicted RBP16.06■□□□□ 0.16
TRIO-222ENST00000515144 PLCD1P51178 756 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 CCDC93Q567U6 631 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 USP17L3A6NCW0 530 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 USP17L4A6NCW7 530 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 LRRIQ4A6NIV6 560 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 SNX16P57768 344 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 USP17L1Q7RTZ2 530 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 RNF181Q9P0P0 153 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 FAM169AQ9Y6X4 670 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 HSF2BPO75031 334 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 FMNL1O95466 1100 aaPredicted RBP16.06■□□□□ 0.16
TRIO-222ENST00000515144 SUPT20HL1Q3ZLR7 823 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 XKR9Q5GH70 373 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 RIOK1Q9BRS2 568 aaKnown RBP16.06■□□□□ 0.16
TRIO-222ENST00000515144 RASAL2Q9UJF2 1139 aa16.06■□□□□ 0.16
TRIO-222ENST00000515144 PLEKHG3A1L390 1219 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 CTAGE9A4FU28 777 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 NEMFO60524 1076 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 R3HDM1Q15032 1099 aaKnown RBP16.05■□□□□ 0.16
TRIO-222ENST00000515144 DIS3L2Q8IYB7 885 aaKnown RBP16.05■□□□□ 0.16
TRIO-222ENST00000515144 CEP63Q96MT8 703 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 MYO1AQ9UBC5 1043 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 PCDHB13Q9Y5F0 798 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 SYNJ2BP-COX16A0A087WUM0 186 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 ZNF654Q8IZM8 581 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 COX16Q9P0S2 106 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 DDX25Q9UHL0 483 aaKnown RBP16.05■□□□□ 0.16
TRIO-222ENST00000515144 ELP1O95163 1332 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 DKC1O60832 514 aaKnown RBP eCLIP16.05■□□□□ 0.162e-7■■■■■ 81.1
TRIO-222ENST00000515144 YARSP54577 528 aaKnown RBP16.05■□□□□ 0.16
TRIO-222ENST00000515144 C4orf50Q6ZRC1 276 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 CABP7Q86V35 215 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 ABI1Q8IZP0 508 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 PNMA1Q8ND90 353 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 GTF3C6Q969F1 213 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 PIM2Q9P1W9 311 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 LRWD1Q9UFC0 647 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 DNAI1Q9UI46 699 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 PALLDQ8WX93 1383 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 PSMC4P43686 418 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 EXOC7Q9UPT5 735 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 SPOPO43791 374 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 TNFAIP3P21580 790 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 NONOQ15233 471 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRIO-222ENST00000515144 CCDC155Q8N6L0 562 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 WDR17Q8IZU2 1322 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 SHTN1A0MZ66 631 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 EXOC3O60645 756 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 SREK1Q8WXA9 508 aaKnown RBP16.05■□□□□ 0.16
TRIO-222ENST00000515144 AP5M1Q9H0R1 490 aa16.05■□□□□ 0.16
TRIO-222ENST00000515144 BLMP54132 1417 aaPredicted RBP16.04■□□□□ 0.16
TRIO-222ENST00000515144 CFAP58Q5T655 872 aa16.04■□□□□ 0.16
TRIO-222ENST00000515144 NAP1L4Q99733 375 aaKnown RBP16.04■□□□□ 0.16
TRIO-222ENST00000515144 NKX1-1Q15270 411 aaPredicted RBP16.04■□□□□ 0.16
TRIO-222ENST00000515144 NR1I2O75469 434 aa16.04■□□□□ 0.16
TRIO-222ENST00000515144 CKAP4Q07065 602 aaKnown RBP16.04■□□□□ 0.16
TRIO-222ENST00000515144 BMS1Q14692 1282 aaKnown RBP16.04■□□□□ 0.16
TRIO-222ENST00000515144 ANO1Q5XXA6 986 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms