RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 KIAA0825Q8IV33 1275 aa7.8□□□□□ -1.16
PHF3-211ENST00000514822 RGS22Q8NE09 1264 aa7.8□□□□□ -1.16
PHF3-211ENST00000514822 DNAJB8Q8NHS0 232 aa7.8□□□□□ -1.16
PHF3-211ENST00000514822 SPON2Q9BUD6 331 aa7.8□□□□□ -1.16
PHF3-211ENST00000514822 NT5C1AQ9BXI3 368 aa7.8□□□□□ -1.16
PHF3-211ENST00000514822 UBP1Q9NZI7 540 aa7.8□□□□□ -1.16
PHF3-211ENST00000514822 PCDHB14Q9Y5E9 798 aa7.8□□□□□ -1.16
PHF3-211ENST00000514822 PITPNM2Q9BZ72 1349 aa7.79□□□□□ -1.16
PHF3-211ENST00000514822 SCAMP3O14828 347 aaKnown RBP7.79□□□□□ -1.16
PHF3-211ENST00000514822 CRKP46108 304 aa7.79□□□□□ -1.16
PHF3-211ENST00000514822 IKZF1Q13422 519 aa7.79□□□□□ -1.16
PHF3-211ENST00000514822 SEZ6Q53EL9 994 aa7.79□□□□□ -1.16
PHF3-211ENST00000514822 CBLL1Q75N03 491 aa7.79□□□□□ -1.16
PHF3-211ENST00000514822 PHACTR4Q8IZ21 702 aa7.79□□□□□ -1.16
PHF3-211ENST00000514822 PPP1R13LQ8WUF5 828 aa7.79□□□□□ -1.16
PHF3-211ENST00000514822 NKD1Q969G9 470 aa7.79□□□□□ -1.16
PHF3-211ENST00000514822 MRRFQ96E11 262 aaKnown RBP7.79□□□□□ -1.16
PHF3-211ENST00000514822 CCDC74BQ96LY2 380 aa7.79□□□□□ -1.16
PHF3-211ENST00000514822 HSPA12BQ96MM6 686 aa7.79□□□□□ -1.16
PHF3-211ENST00000514822 CCDC9Q9Y3X0 531 aaKnown RBP7.79□□□□□ -1.16
PHF3-211ENST00000514822 H3BS24 57 aa7.78□□□□□ -1.16
PHF3-211ENST00000514822 ATE1O95260 518 aa7.78□□□□□ -1.16
PHF3-211ENST00000514822 MCM4P33991 863 aa7.78□□□□□ -1.16
PHF3-211ENST00000514822 TNNI2P48788 182 aa7.78□□□□□ -1.16
PHF3-211ENST00000514822 ZNF792Q3KQV3 632 aa7.78□□□□□ -1.16
PHF3-211ENST00000514822 PIWIL2Q8TC59 973 aaKnown RBP7.78□□□□□ -1.16
PHF3-211ENST00000514822 PI4K2BQ8TCG2 481 aa7.78□□□□□ -1.16
PHF3-211ENST00000514822 SEMA3GQ9NS98 782 aa7.78□□□□□ -1.16
PHF3-211ENST00000514822 ST14Q9Y5Y6 855 aa7.78□□□□□ -1.16
PHF3-211ENST00000514822 DNAJA2O60884 412 aa7.77□□□□□ -1.17
PHF3-211ENST00000514822 ZNF165P49910 485 aa7.77□□□□□ -1.17
PHF3-211ENST00000514822 TNK2Q07912 1038 aa7.77□□□□□ -1.17
PHF3-211ENST00000514822 ZNF394Q53GI3 561 aa7.77□□□□□ -1.17
PHF3-211ENST00000514822 GK5Q6ZS86 529 aa7.77□□□□□ -1.17
PHF3-211ENST00000514822 THAP5Q7Z6K1 395 aa7.77□□□□□ -1.17
PHF3-211ENST00000514822 REXO1Q8N1G1 1221 aaKnown RBP7.77□□□□□ -1.17
PHF3-211ENST00000514822 BAHD1Q8TBE0 780 aaPredicted RBP7.77□□□□□ -1.17
PHF3-211ENST00000514822 SLC22A31A6NKX4 558 aa7.76□□□□□ -1.17
PHF3-211ENST00000514822 GBP1P32455 592 aa7.76□□□□□ -1.17
PHF3-211ENST00000514822 ZP2Q05996 745 aa7.76□□□□□ -1.17
PHF3-211ENST00000514822 SLITRK4Q8IW52 837 aa7.76□□□□□ -1.17
PHF3-211ENST00000514822 RNF141Q8WVD5 230 aa7.76□□□□□ -1.17
PHF3-211ENST00000514822 EAF1Q96JC9 268 aaPredicted RBP7.76□□□□□ -1.17
PHF3-211ENST00000514822 EHMT1Q9H9B1 1298 aa7.76□□□□□ -1.17
PHF3-211ENST00000514822 GMIPQ9P107 970 aa7.76□□□□□ -1.17
PHF3-211ENST00000514822 PCDHGB7Q9Y5F8 929 aa7.76□□□□□ -1.17
PHF3-211ENST00000514822 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
PHF3-211ENST00000514822 RAG1P15918 1043 aa7.75□□□□□ -1.17
PHF3-211ENST00000514822 CHMP4BP1P59074 171 aa7.75□□□□□ -1.17
PHF3-211ENST00000514822 ARSHQ5FYA8 562 aa7.75□□□□□ -1.17
PHF3-211ENST00000514822 SLC23A3Q6PIS1 610 aa7.75□□□□□ -1.17
PHF3-211ENST00000514822 Q96M66 194 aa7.75□□□□□ -1.17
PHF3-211ENST00000514822 KIF2CQ99661 725 aa7.75□□□□□ -1.17
PHF3-211ENST00000514822 RC3H2Q9HBD1 1191 aaKnown RBP7.75□□□□□ -1.17
PHF3-211ENST00000514822 ATP13A1Q9HD20 1204 aa7.75□□□□□ -1.17
PHF3-211ENST00000514822 KCNH3Q9ULD8 1083 aa7.75□□□□□ -1.17
PHF3-211ENST00000514822 RGS13O14921 159 aa7.74□□□□□ -1.17
PHF3-211ENST00000514822 CLCQ05315 142 aa7.74□□□□□ -1.17
PHF3-211ENST00000514822 OVOS1Q6IE37 1185 aa7.74□□□□□ -1.17
PHF3-211ENST00000514822 UBE2FQ969M7 185 aa7.74□□□□□ -1.17
PHF3-211ENST00000514822 KREMEN1Q96MU8 473 aa7.74□□□□□ -1.17
PHF3-211ENST00000514822 MBNL3Q9NUK0 354 aaKnown RBP7.74□□□□□ -1.17
PHF3-211ENST00000514822 LMCD1Q9NZU5 365 aa7.74□□□□□ -1.17
PHF3-211ENST00000514822 ZSWIM5Q9P217 1185 aa7.74□□□□□ -1.17
PHF3-211ENST00000514822 DDX41Q9UJV9 622 aaKnown RBP7.74□□□□□ -1.17
PHF3-211ENST00000514822 BIN1O00499 593 aa7.73□□□□□ -1.17
PHF3-211ENST00000514822 PAX4O43316 350 aa7.73□□□□□ -1.17
PHF3-211ENST00000514822 RACK1P63244 317 aaKnown RBP7.73□□□□□ -1.17
PHF3-211ENST00000514822 LRRFIP1Q32MZ4 808 aaKnown RBP7.73□□□□□ -1.17
PHF3-211ENST00000514822 ASPNQ9BXN1 380 aa7.73□□□□□ -1.17
PHF3-211ENST00000514822 TRIT1Q9H3H1 467 aaKnown RBP7.73□□□□□ -1.17
PHF3-211ENST00000514822 CARS2Q9HA77 564 aaKnown RBP7.73□□□□□ -1.17
PHF3-211ENST00000514822 KIAA1522Q9P206 1035 aaPredicted RBP7.73□□□□□ -1.17
PHF3-211ENST00000514822 ADAMTS6Q9UKP5 1117 aa7.73□□□□□ -1.17
PHF3-211ENST00000514822 UNCXA6NJT0 531 aa7.72□□□□□ -1.17
PHF3-211ENST00000514822 JUNBP17275 347 aaPredicted RBP7.72□□□□□ -1.17
PHF3-211ENST00000514822 CDCP2Q5VXM1 449 aa7.72□□□□□ -1.17
PHF3-211ENST00000514822 ZNF654Q8IZM8 581 aa7.72□□□□□ -1.17
PHF3-211ENST00000514822 DTWD2Q8NBA8 298 aa7.72□□□□□ -1.17
PHF3-211ENST00000514822 PRDM7Q9NQW5 492 aa7.72□□□□□ -1.17
PHF3-211ENST00000514822 RBAK-RBAKDNI3L0D1 243 aa7.71□□□□□ -1.18
PHF3-211ENST00000514822 ITGB5P18084 799 aa7.71□□□□□ -1.18
PHF3-211ENST00000514822 NLRC3Q7RTR2 1065 aa7.71□□□□□ -1.18
PHF3-211ENST00000514822 TMPRSS7Q7RTY8 843 aa7.71□□□□□ -1.18
PHF3-211ENST00000514822 METTL16Q86W50 562 aaKnown RBP7.71□□□□□ -1.18
PHF3-211ENST00000514822 LRRN4CLQ8ND94 238 aa7.71□□□□□ -1.18
PHF3-211ENST00000514822 TMEM40Q8WWA1 233 aa7.71□□□□□ -1.18
PHF3-211ENST00000514822 ATG4CQ96DT6 458 aa7.71□□□□□ -1.18
PHF3-211ENST00000514822 GPR62Q9BZJ7 368 aa7.71□□□□□ -1.18
PHF3-211ENST00000514822 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.71□□□□□ -1.18
PHF3-211ENST00000514822 CNNM2Q9H8M5 875 aa7.71□□□□□ -1.18
PHF3-211ENST00000514822 GPATCH2Q9NW75 528 aa7.71□□□□□ -1.18
PHF3-211ENST00000514822 MEIS3P2A8K0S8 358 aa7.7□□□□□ -1.18
PHF3-211ENST00000514822 IMPDH2P12268 514 aa7.7□□□□□ -1.18
PHF3-211ENST00000514822 CCNFP41002 786 aa7.7□□□□□ -1.18
PHF3-211ENST00000514822 ATG4DQ86TL0 474 aaPredicted RBP7.7□□□□□ -1.18
PHF3-211ENST00000514822 ASIC4Q96FT7 647 aa7.7□□□□□ -1.18
PHF3-211ENST00000514822 DUSP15Q9H1R2 295 aaPredicted RBP7.7□□□□□ -1.18
PHF3-211ENST00000514822 LRRN2O75325 713 aa7.69□□□□□ -1.18
PHF3-211ENST00000514822 UBOX5O94941 541 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms