RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 LIN9Q5TKA1 542 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 KIAA1841Q6NSI8 718 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 MAEAQ7L5Y9 396 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 ELMOD1Q8N336 334 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 EHBP1Q8NDI1 1231 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 NEK11Q8NG66 645 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 CDHR1Q96JP9 859 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 KBTBD13C9JR72 458 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 EIF3JO75822 258 aaKnown RBP8.37□□□□□ -1.07
CCDC30-214ENST00000514642 ARID4AP29374 1257 aaPredicted RBP8.37□□□□□ -1.07
CCDC30-214ENST00000514642 GJC1P36383 396 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 ARL1P40616 181 aaPredicted RBP8.37□□□□□ -1.07
CCDC30-214ENST00000514642 DCAF17Q5H9S7 520 aaPredicted RBP8.37□□□□□ -1.07
CCDC30-214ENST00000514642 CEP135Q66GS9 1140 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 IQUBQ8NA54 791 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 TFIP11Q9UBB9 837 aaKnown RBP8.37□□□□□ -1.07
CCDC30-214ENST00000514642 TULP4Q9NRJ4 1543 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 ATP8B3O60423 1300 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 STK10O94804 968 aaKnown RBP8.37□□□□□ -1.07
CCDC30-214ENST00000514642 KIF11P52732 1056 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 HOXC10Q9NYD6 342 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 BIN1O00499 593 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 POLGP54098 1239 aaPredicted RBP8.37□□□□□ -1.07
CCDC30-214ENST00000514642 GABPAQ06546 454 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 CCDC50Q8IVM0 306 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 MRPS27Q92552 414 aaKnown RBP8.37□□□□□ -1.07
CCDC30-214ENST00000514642 KANSL2Q9H9L4 492 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 USP17L21D6R901 530 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 ASPRV1Q53RT3 343 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 KIAA1524Q8TCG1 905 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 RASAL2Q9UJF2 1139 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 GOLGA6L9A6NEM1 432 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 OATP04181 439 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 NLRP10Q86W26 655 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 REXO1Q8N1G1 1221 aaKnown RBP8.36□□□□□ -1.07
CCDC30-214ENST00000514642 GABPB2Q8TAK5 448 aaPredicted RBP8.36□□□□□ -1.07
CCDC30-214ENST00000514642 FBXO40Q9UH90 709 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 ALKQ9UM73 1620 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 TMEM110-MUSTN1A8MSY1 372 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 ZBBXA8MT70 800 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 SND1Q7KZF4 910 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC30-214ENST00000514642 MIGA2Q7L4E1 593 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 FOXP4Q8IVH2 680 aaPredicted RBP8.36□□□□□ -1.07
CCDC30-214ENST00000514642 TPH2Q8IWU9 490 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 GLI2P10070 1586 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 C1orf167Q5SNV9 1468 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 SMCO2A6NFE2 343 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 SPTLC2O15270 562 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 DDAH1O94760 285 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 FOSP01100 380 aaPredicted RBP8.36□□□□□ -1.07
CCDC30-214ENST00000514642 ZSCAN22P10073 491 aaPredicted RBP8.36□□□□□ -1.07
CCDC30-214ENST00000514642 CRKP46108 304 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 STAT2P52630 851 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 EZH2Q15910 746 aaKnown RBP8.36□□□□□ -1.07
CCDC30-214ENST00000514642 PPP2R3CQ969Q6 453 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 PLIN2Q99541 437 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 SELENOOQ9BVL4 669 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 BRIP1Q9BX63 1249 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 NT5C3AQ9H0P0 336 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 TYW5A2RUC4 315 aaKnown RBP8.36□□□□□ -1.07
CCDC30-214ENST00000514642 PDE8BO95263 885 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 DNA2P51530 1060 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 IFFO1Q0D2I5 559 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 FSD2A1L4K1 749 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 ATP5JP18859 108 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 CYLC1P35663 651 aaPredicted RBP8.36□□□□□ -1.07
CCDC30-214ENST00000514642 POLA2Q14181 598 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 XKR9Q5GH70 373 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 GSTA5Q7RTV2 222 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 PODNQ7Z5L7 613 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 SNX29Q8TEQ0 813 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 DSCC1Q9BVC3 393 aa8.36□□□□□ -1.07
CCDC30-214ENST00000514642 CPSF1Q10570 1443 aaKnown RBP8.36□□□□□ -1.07
CCDC30-214ENST00000514642 GOLGA6L7A0A1B0GV03 622 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 VWA3AA6NCI4 1184 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 NDC80O14777 642 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 GDF11O95390 407 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 LIG4P49917 911 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 RILPL1Q5EBL4 403 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 GPATCH4Q5T3I0 446 aaKnown RBP8.35□□□□□ -1.07
CCDC30-214ENST00000514642 TBC1D9BQ66K14 1250 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 PLA2G4DQ86XP0 818 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 SP8Q8IXZ3 490 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 WRNIP1Q96S55 665 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 ATG3Q9NT62 314 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 USP17L5A8MUK1 530 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 ABL1P00519 1130 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 RPS6KB1P23443 525 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 KIAA0753Q2KHM9 967 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 RC3H1Q5TC82 1133 aaKnown RBP8.35□□□□□ -1.07
CCDC30-214ENST00000514642 SLC17A8Q8NDX2 589 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 GTF3C2Q8WUA4 911 aaPredicted RBP8.35□□□□□ -1.07
CCDC30-214ENST00000514642 DYDC1Q8WWB3 177 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 BACH2Q9BYV9 841 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 LRWD1Q9UFC0 647 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 SUSD4Q5VX71 490 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 GALNT17Q6IS24 598 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 HAUS7Q99871 368 aa8.35□□□□□ -1.07
CCDC30-214ENST00000514642 GBP3Q9H0R5 595 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms