RNA–Protein interactions for RNA: ENST00000514552.5

PDE4D-222, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-222ENST00000514552 MRPL18Q9H0U6 180 aaKnown RBP9.71□□□□□ -0.86
PDE4D-222ENST00000514552 USP19O94966 1318 aa9.71□□□□□ -0.86
PDE4D-222ENST00000514552 PARD3Q8TEW0 1356 aa9.71□□□□□ -0.86
PDE4D-222ENST00000514552 KIAA0232Q92628 1395 aa9.71□□□□□ -0.86
PDE4D-222ENST00000514552 PPP2R3AQ06190 1150 aa9.7□□□□□ -0.86
PDE4D-222ENST00000514552 MRPL58Q14197 206 aaKnown RBP9.7□□□□□ -0.86
PDE4D-222ENST00000514552 TMEM39AQ9NV64 488 aa9.7□□□□□ -0.86
PDE4D-222ENST00000514552 KCNK4Q9NYG8 393 aa9.7□□□□□ -0.86
PDE4D-222ENST00000514552 VTI1BQ9UEU0 232 aa9.7□□□□□ -0.86
PDE4D-222ENST00000514552 SPATA31A1Q5TZJ5 1347 aa9.7□□□□□ -0.86
PDE4D-222ENST00000514552 ADAM11O75078 769 aa9.69□□□□□ -0.86
PDE4D-222ENST00000514552 SHISA2Q6UWI4 295 aa9.69□□□□□ -0.86
PDE4D-222ENST00000514552 SSH2Q76I76 1423 aa9.69□□□□□ -0.86
PDE4D-222ENST00000514552 DEFB132Q7Z7B7 95 aa9.69□□□□□ -0.86
PDE4D-222ENST00000514552 CRELD1Q96HD1 420 aa9.69□□□□□ -0.86
PDE4D-222ENST00000514552 CDK19Q9BWU1 502 aa9.69□□□□□ -0.86
PDE4D-222ENST00000514552 GPN3Q9UHW5 284 aaPredicted RBP9.69□□□□□ -0.86
PDE4D-222ENST00000514552 QRICH2Q9H0J4 1663 aa9.68□□□□□ -0.86
PDE4D-222ENST00000514552 SLIT3O75094 1523 aa9.68□□□□□ -0.86
PDE4D-222ENST00000514552 PPIP5K1Q6PFW1 1433 aa9.68□□□□□ -0.86
PDE4D-222ENST00000514552 ACEP12821 1306 aa9.68□□□□□ -0.86
PDE4D-222ENST00000514552 CENPJQ9HC77 1338 aaPredicted RBP9.68□□□□□ -0.86
PDE4D-222ENST00000514552 CTSHP09668 335 aa9.68□□□□□ -0.86
PDE4D-222ENST00000514552 NLRP12P59046 1061 aa9.68□□□□□ -0.86
PDE4D-222ENST00000514552 AP3B2Q13367 1082 aa9.68□□□□□ -0.86
PDE4D-222ENST00000514552 NBPF8Q3BBV2 869 aa9.68□□□□□ -0.86
PDE4D-222ENST00000514552 TMEM130Q8N3G9 435 aa9.68□□□□□ -0.86
PDE4D-222ENST00000514552 DDX3YO15523 660 aaKnown RBP9.67□□□□□ -0.86
PDE4D-222ENST00000514552 CYP11A1P05108 521 aa9.67□□□□□ -0.86
PDE4D-222ENST00000514552 TPTE2Q6XPS3 522 aa9.67□□□□□ -0.86
PDE4D-222ENST00000514552 NECAB3Q96P71 396 aaPredicted RBP9.67□□□□□ -0.86
PDE4D-222ENST00000514552 NRSN2Q9GZP1 204 aa9.67□□□□□ -0.86
PDE4D-222ENST00000514552 TTF2Q9UNY4 1162 aaKnown RBP9.67□□□□□ -0.86
PDE4D-222ENST00000514552 PARP4Q9UKK3 1724 aaKnown RBP9.67□□□□□ -0.86
PDE4D-222ENST00000514552 USP6P35125 1406 aa9.66□□□□□ -0.86
PDE4D-222ENST00000514552 ST13P50502 369 aaKnown RBP9.66□□□□□ -0.86
PDE4D-222ENST00000514552 ZNF157P51786 506 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-222ENST00000514552 ADGRE1Q14246 886 aa9.66□□□□□ -0.86
PDE4D-222ENST00000514552 DUOXA2Q1HG44 320 aa9.66□□□□□ -0.86
PDE4D-222ENST00000514552 FAM196AQ6ZSG2 479 aa9.66□□□□□ -0.86
PDE4D-222ENST00000514552 SV2BQ7L1I2 683 aa9.66□□□□□ -0.86
PDE4D-222ENST00000514552 CD163Q86VB7 1156 aa9.66□□□□□ -0.86
PDE4D-222ENST00000514552 TRIM56Q9BRZ2 755 aaKnown RBP9.66□□□□□ -0.86
PDE4D-222ENST00000514552 THRAP3Q9Y2W1 955 aaKnown RBP9.66□□□□□ -0.86
PDE4D-222ENST00000514552 CAMTA1Q9Y6Y1 1673 aa9.66□□□□□ -0.86
PDE4D-222ENST00000514552 TRPM1Q7Z4N2 1603 aa9.66□□□□□ -0.86
PDE4D-222ENST00000514552 ABCC6O95255 1503 aa9.66□□□□□ -0.86
PDE4D-222ENST00000514552 COL5A2P05997 1499 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-222ENST00000514552 RGPD3A6NKT7 1758 aaPredicted RBP9.65□□□□□ -0.86
PDE4D-222ENST00000514552 RGPD4Q7Z3J3 1758 aa9.65□□□□□ -0.86
PDE4D-222ENST00000514552 USP31Q70CQ4 1352 aa9.65□□□□□ -0.86
PDE4D-222ENST00000514552 RREB1Q92766 1687 aa9.65□□□□□ -0.86
PDE4D-222ENST00000514552 C1QTNF9BB2RNN3 333 aa9.65□□□□□ -0.86
PDE4D-222ENST00000514552 CHRNA4P43681 627 aa9.65□□□□□ -0.86
PDE4D-222ENST00000514552 TAF1CQ15572 869 aaPredicted RBP9.65□□□□□ -0.86
PDE4D-222ENST00000514552 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.65□□□□□ -0.86
PDE4D-222ENST00000514552 LOC100289279A0A1B0GTE1 492 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 F8W735 103 aaPredicted RBP9.64□□□□□ -0.87
PDE4D-222ENST00000514552 ENC1O14682 589 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 FBXO24O75426 580 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 WISP1O95388 367 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 VAMP1P23763 118 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 MBTPS1Q14703 1052 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 POU4F3Q15319 338 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 MEI1Q5TIA1 1274 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 KIAA1211Q6ZU35 1233 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 ACAD11Q709F0 780 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 UBASH3BQ8TF42 649 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 USP26Q9BXU7 913 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 AKTIPQ9H8T0 292 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 CRB1P82279 1406 aa9.64□□□□□ -0.87
PDE4D-222ENST00000514552 AATKQ6ZMQ8 1374 aa9.63□□□□□ -0.87
PDE4D-222ENST00000514552 SBNO2Q9Y2G9 1366 aa9.63□□□□□ -0.87
PDE4D-222ENST00000514552 NME2P22392 152 aa9.63□□□□□ -0.87
PDE4D-222ENST00000514552 MAOBP27338 520 aa9.63□□□□□ -0.87
PDE4D-222ENST00000514552 ZC3H6P61129 1189 aaKnown RBP9.63□□□□□ -0.87
PDE4D-222ENST00000514552 PLA2G4EQ3MJ16 856 aa9.63□□□□□ -0.87
PDE4D-222ENST00000514552 HP1BP3Q5SSJ5 553 aaPredicted RBP9.63□□□□□ -0.87
PDE4D-222ENST00000514552 TCP11L2Q8N4U5 519 aa9.63□□□□□ -0.87
PDE4D-222ENST00000514552 CORO1BQ9BR76 489 aa9.63□□□□□ -0.87
PDE4D-222ENST00000514552 SAMM50Q9Y512 469 aa9.63□□□□□ -0.87
PDE4D-222ENST00000514552 PIK3C2AO00443 1686 aa9.63□□□□□ -0.87
PDE4D-222ENST00000514552 PEAK1Q9H792 1746 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 USP54Q70EL1 1684 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 MEGF11A6BM72 1044 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 GCP02774 474 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 CHRNA2Q15822 529 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 CCDC85BQ15834 202 aaPredicted RBP9.62□□□□□ -0.87
PDE4D-222ENST00000514552 SULF2Q8IWU5 870 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 WFDC12Q8WWY7 111 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 CAMKK2Q96RR4 588 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 NOC4LQ9BVI4 516 aaKnown RBP9.62□□□□□ -0.87
PDE4D-222ENST00000514552 EMILIN2Q9BXX0 1053 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 LRRC37A3O60309 1634 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 OVOS2A0A0G2JMS6 1433 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 OVOS2A0A0J9YW53 1432 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 BCL9O00512 1426 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 OVOS2Q6IE36 1432 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 NUP188Q5SRE5 1749 aa9.62□□□□□ -0.87
PDE4D-222ENST00000514552 WNK3Q9BYP7 1800 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms