RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 ARHGEF6Q15052 776 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 ZSCAN25Q6NSZ9 544 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 CTR9Q6PD62 1173 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 SIAH1Q8IUQ4 282 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 ANKRD13CQ8N6S4 541 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 GCC1Q96CN9 775 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 SEC62Q99442 399 aaKnown RBP10.51□□□□□ -0.73
HERC4-214ENST00000513996 STAP2Q9UGK3 403 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 SRRDQ9UH36 339 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 GABRQQ9UN88 632 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 A0A1W2PRG0 241 aa10.5□□□□□ -0.73
HERC4-214ENST00000513996 GNRH1P01148 92 aa10.5□□□□□ -0.73
HERC4-214ENST00000513996 CDK8P49336 464 aa10.5□□□□□ -0.73
HERC4-214ENST00000513996 PDE1AP54750 535 aa10.5□□□□□ -0.73
HERC4-214ENST00000513996 MLLT1Q03111 559 aaPredicted RBP10.5□□□□□ -0.73
HERC4-214ENST00000513996 USP17L2Q6R6M4 530 aa10.5□□□□□ -0.73
HERC4-214ENST00000513996 SMC5Q8IY18 1101 aa10.5□□□□□ -0.73
HERC4-214ENST00000513996 SMCR8Q8TEV9 937 aaPredicted RBP10.5□□□□□ -0.73
HERC4-214ENST00000513996 SH3TC2Q8TF17 1288 aa10.5□□□□□ -0.73
HERC4-214ENST00000513996 APPBP2Q92624 585 aa10.5□□□□□ -0.73
HERC4-214ENST00000513996 ZNF333Q96JL9 665 aa10.5□□□□□ -0.73
HERC4-214ENST00000513996 TXNRD2Q9NNW7 524 aa10.5□□□□□ -0.73
HERC4-214ENST00000513996 TMOD4Q9NZQ9 345 aa10.5□□□□□ -0.73
HERC4-214ENST00000513996 DDX60LQ5H9U9 1706 aaKnown RBP10.5□□□□□ -0.73
HERC4-214ENST00000513996 ERC2O15083 957 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 GPAA1O43292 621 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 MYCP01106 439 aaPredicted RBP10.49□□□□□ -0.73
HERC4-214ENST00000513996 AKR1B1P15121 316 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 CD44P16070 742 aaKnown RBP10.49□□□□□ -0.73
HERC4-214ENST00000513996 FCGRTP55899 365 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 PRKCZQ05513 592 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 AAMPQ13685 434 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 ZYXQ15942 572 aaKnown RBP10.49□□□□□ -0.73
HERC4-214ENST00000513996 FAM110CQ1W6H9 321 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 Q3C1V9 767 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 KIAA1755Q5JYT7 1200 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 C16orf86Q6ZW13 317 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 CLEC10AQ8IUN9 316 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 C12orf42Q96LP6 360 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 LNPKQ9C0E8 428 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 KIAA1683Q9H0B3 1180 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 EPB41L4AQ9HCS5 686 aaPredicted RBP10.49□□□□□ -0.73
HERC4-214ENST00000513996 CABP5Q9NP86 173 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 RBPJLQ9UBG7 517 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 PNMA3Q9UL41 463 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 DOCK3Q8IZD9 2030 aa10.49□□□□□ -0.73
HERC4-214ENST00000513996 KIAA0100Q14667 2235 aaKnown RBP10.49□□□□□ -0.73
HERC4-214ENST00000513996 BAZ2AQ9UIF9 1905 aaKnown RBP10.48□□□□□ -0.73
HERC4-214ENST00000513996 CENPFP49454 3210 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 MPHOSPH10O00566 681 aaKnown RBP10.48□□□□□ -0.73
HERC4-214ENST00000513996 ZFYP08048 801 aaPredicted RBP10.48□□□□□ -0.73
HERC4-214ENST00000513996 EN2P19622 333 aaPredicted RBP10.48□□□□□ -0.73
HERC4-214ENST00000513996 HOXD10P28358 340 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 GCLCP48506 637 aaPredicted RBP10.48□□□□□ -0.73
HERC4-214ENST00000513996 CLCN6P51797 869 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 PRMT2P55345 433 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 HERVK_113P62684 666 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 IRX6P78412 446 aaPredicted RBP10.48□□□□□ -0.73
HERC4-214ENST00000513996 PABPC4Q13310 644 aaKnown RBP eCLIP10.48□□□□□ -0.73
HERC4-214ENST00000513996 MTFR1Q15390 333 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 SLC9C1Q4G0N8 1177 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 SBK1Q52WX2 424 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 ZMYM1Q5SVZ6 1142 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 B4GALNT3Q6L9W6 998 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.48□□□□□ -0.73
HERC4-214ENST00000513996 RWDD1Q9H446 243 aaPredicted RBP10.48□□□□□ -0.73
HERC4-214ENST00000513996 MORF4L1Q9UBU8 362 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 SWAP70Q9UH65 585 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 MYPNQ86TC9 1320 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 MYH7P12883 1935 aa10.48□□□□□ -0.73
HERC4-214ENST00000513996 LOC285556D6RIA3 1793 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 NAV1Q8NEY1 1877 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 PATL2C9JE40 543 aaKnown RBP10.47□□□□□ -0.73
HERC4-214ENST00000513996 FOXP2O15409 715 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 CNMDO75829 334 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 FLT3LGP49771 235 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 IRX3P78415 501 aaPredicted RBP10.47□□□□□ -0.73
HERC4-214ENST00000513996 NUCB1Q02818 461 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 GIMAP6Q6P9H5 292 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 CATSPERGQ6ZRH7 1159 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 CCDC129Q6ZRS4 1044 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 TMEM179Q6ZVK1 233 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 NBPF11Q86T75 865 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 STK11IPQ8N1F8 1099 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 RAET1EQ8TD07 263 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 FSD1Q9BTV5 496 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 GJD2Q9UKL4 321 aa10.47□□□□□ -0.73
HERC4-214ENST00000513996 MINDY4BA8MYZ0 360 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 USP17L15C9J2P7 530 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 USP17L13C9JLJ4 530 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 USP17L11C9JVI0 530 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 USP17L18D6R9N7 530 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 USP17L22D6RA61 530 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 USP17L17D6RBQ6 530 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 USP17L19D6RCP7 530 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 USP17L20D6RJB6 530 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 TNPO2O14787 897 aaKnown RBP10.46□□□□□ -0.73
HERC4-214ENST00000513996 VCAM1P19320 739 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 RASA1P20936 1047 aa10.46□□□□□ -0.73
HERC4-214ENST00000513996 GRK4P32298 578 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms