RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 USP17L19D6RCP7 530 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 USP17L20D6RJB6 530 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 SEPT4O43236 478 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 CLTBP09497 229 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 IL15P40933 162 aaPredicted RBP13.43□□□□□ -0.26
NFKB1-211ENST00000513803 EPHB4P54760 987 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 FPGSQ05932 587 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 USP17L24Q0WX57 530 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 GRB14Q14449 540 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 DPP9Q86TI2 863 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 TEX11Q8IYF3 940 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 NPLOC4Q8TAT6 608 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 FERMT2Q96AC1 680 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 TSPYL2Q9H2G4 693 aaPredicted RBP13.43□□□□□ -0.26
NFKB1-211ENST00000513803 HCN4Q9Y3Q4 1203 aa13.43□□□□□ -0.26
NFKB1-211ENST00000513803 KIAA0355O15063 1070 aa13.42□□□□□ -0.26
NFKB1-211ENST00000513803 STRNO43815 780 aa13.42□□□□□ -0.26
NFKB1-211ENST00000513803 IGHA2P01877 340 aa13.42□□□□□ -0.26
NFKB1-211ENST00000513803 ITGB8P26012 769 aa13.42□□□□□ -0.26
NFKB1-211ENST00000513803 ADORA1P30542 326 aa13.42□□□□□ -0.26
NFKB1-211ENST00000513803 OLFML2BQ68BL8 750 aa13.42□□□□□ -0.26
NFKB1-211ENST00000513803 CRACR2BQ8N4Y2 399 aaPredicted RBP13.42□□□□□ -0.26
NFKB1-211ENST00000513803 NOL10Q9BSC4 688 aaKnown RBP13.42□□□□□ -0.26
NFKB1-211ENST00000513803 RLFQ13129 1914 aa13.41□□□□□ -0.26
NFKB1-211ENST00000513803 CNMDO75829 334 aa13.41□□□□□ -0.26
NFKB1-211ENST00000513803 JAG1P78504 1218 aa13.41□□□□□ -0.26
NFKB1-211ENST00000513803 LRRC41Q15345 812 aa13.41□□□□□ -0.26
NFKB1-211ENST00000513803 CCDC85BQ15834 202 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-211ENST00000513803 ANO1Q5XXA6 986 aa13.41□□□□□ -0.26
NFKB1-211ENST00000513803 NSUN4Q96CB9 384 aaKnown RBP13.41□□□□□ -0.26
NFKB1-211ENST00000513803 PRDM12Q9H4Q4 367 aa13.41□□□□□ -0.26
NFKB1-211ENST00000513803 TMEM39AQ9NV64 488 aa13.41□□□□□ -0.26
NFKB1-211ENST00000513803 SLC5A4Q9NY91 659 aa13.41□□□□□ -0.26
NFKB1-211ENST00000513803 ZBTB21Q9ULJ3 1066 aa13.41□□□□□ -0.26
NFKB1-211ENST00000513803 SALL2Q9Y467 1007 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-211ENST00000513803 TIMM10P62072 90 aa13.4□□□□□ -0.26
NFKB1-211ENST00000513803 MVPQ14764 893 aaKnown RBP13.4□□□□□ -0.26
NFKB1-211ENST00000513803 CCDC174Q6PII3 467 aa13.4□□□□□ -0.26
NFKB1-211ENST00000513803 LBX2Q6XYB7 198 aa13.4□□□□□ -0.26
NFKB1-211ENST00000513803 CATSPERGQ6ZRH7 1159 aa13.4□□□□□ -0.26
NFKB1-211ENST00000513803 CCDC129Q6ZRS4 1044 aa13.4□□□□□ -0.26
NFKB1-211ENST00000513803 METTL16Q86W50 562 aaKnown RBP13.4□□□□□ -0.26
NFKB1-211ENST00000513803 ZNF384Q8TF68 577 aa13.4□□□□□ -0.26
NFKB1-211ENST00000513803 C12orf42Q96LP6 360 aa13.4□□□□□ -0.26
NFKB1-211ENST00000513803 RAI14Q9P0K7 980 aa13.4□□□□□ -0.26
NFKB1-211ENST00000513803 PHF24Q9UPV7 400 aa13.4□□□□□ -0.26
NFKB1-211ENST00000513803 FRMPD3Q5JV73 1810 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 GDF11O95390 407 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 BAG3O95817 575 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 PLCG2P16885 1265 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 IGFBP4P22692 258 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 USP14P54578 494 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 AAK1Q2M2I8 961 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 ATF7IPQ6VMQ6 1270 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 FEZ1Q99689 392 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 AKAP2Q9Y2D5 859 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 ATAD5Q96QE3 1844 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 PTPRCP08575 1304 aa13.39□□□□□ -0.27
NFKB1-211ENST00000513803 MUC6Q6W4X9 2439 aa13.38□□□□□ -0.27
NFKB1-211ENST00000513803 DCDC2CA8MYV0 355 aa13.38□□□□□ -0.27
NFKB1-211ENST00000513803 PQBP1O60828 265 aaKnown RBP13.38□□□□□ -0.27
NFKB1-211ENST00000513803 ADORA2AP29274 412 aa13.38□□□□□ -0.27
NFKB1-211ENST00000513803 RNF180Q86T96 592 aa13.38□□□□□ -0.27
NFKB1-211ENST00000513803 SH3RF3Q8TEJ3 882 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-211ENST00000513803 TOX2Q96NM4 488 aa13.38□□□□□ -0.27
NFKB1-211ENST00000513803 PBX4Q9BYU1 374 aa13.38□□□□□ -0.27
NFKB1-211ENST00000513803 CXXC1Q9P0U4 656 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-211ENST00000513803 BTBD7Q9P203 1132 aa13.38□□□□□ -0.27
NFKB1-211ENST00000513803 BMP1P13497 986 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 PRAMEF19Q5SWL8 479 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 TBC1D9Q6ZT07 1266 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 SPATA5Q8NB90 893 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 SLC44A5Q8NCS7 719 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 XAGE2Q96GT9 111 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.37□□□□□ -0.277e-6■□□□□ 9.4
NFKB1-211ENST00000513803 LRFN3Q9BTN0 628 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 DNAJC18Q9H819 358 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 HOXC10Q9NYD6 342 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 HMG20BQ9P0W2 317 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 LRP2BPQ9P2M1 347 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 MSRAQ9UJ68 235 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 HDAC5Q9UQL6 1122 aa13.37□□□□□ -0.27
NFKB1-211ENST00000513803 A0A1B0GUL7 405 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 TIMP1P01033 207 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 GH2P01242 217 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 HLA-DOAP06340 250 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 RARBP10826 455 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 PBX2P40425 430 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 ADGRE1Q14246 886 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 ZYXQ15942 572 aaKnown RBP13.36□□□□□ -0.27
NFKB1-211ENST00000513803 SHROOM1Q2M3G4 852 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-211ENST00000513803 FAM47AQ5JRC9 791 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 GORABQ5T7V8 394 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 ANKRD33Q7Z3H0 272 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 MAPKAPK5Q8IW41 473 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 MRPL50Q8N5N7 158 aaKnown RBP13.36□□□□□ -0.27
NFKB1-211ENST00000513803 TGFBRAP1Q8WUH2 860 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 NECAB3Q96P71 396 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-211ENST00000513803 KIAA1683Q9H0B3 1180 aa13.36□□□□□ -0.27
NFKB1-211ENST00000513803 COPRSQ9NQ92 184 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms