RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 MAFAQ8NHW3 353 aaPredicted RBP17.11■□□□□ 0.33
SPCS3-204ENST00000513139 C12orf42Q96LP6 360 aa17.11■□□□□ 0.33
SPCS3-204ENST00000513139 SEMA6BQ9H3T3 888 aa17.11■□□□□ 0.33
SPCS3-204ENST00000513139 PRDM6Q9NQX0 595 aa17.11■□□□□ 0.33
SPCS3-204ENST00000513139 ZNF236Q9UL36 1845 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 USP17L15C9J2P7 530 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 USP17L13C9JLJ4 530 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 USP17L11C9JVI0 530 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 USP17L18D6R9N7 530 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 USP17L22D6RA61 530 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 USP17L17D6RBQ6 530 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 USP17L19D6RCP7 530 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 USP17L20D6RJB6 530 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 PTPREP23469 700 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 MCAMP43121 646 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 RTP1P59025 263 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 SLFN5Q08AF3 891 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 USP17L24Q0WX57 530 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 LBX2Q6XYB7 198 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 TGFBRAP1Q8WUH2 860 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 MEIS3Q99687 375 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 API5Q9BZZ5 524 aaKnown RBP17.1■□□□□ 0.33
SPCS3-204ENST00000513139 AATFQ9NY61 560 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPCS3-204ENST00000513139 FLRT1Q9NZU1 646 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.1■□□□□ 0.33
SPCS3-204ENST00000513139 FLT1P17948 1338 aa17.1■□□□□ 0.33
SPCS3-204ENST00000513139 CNMDO75829 334 aa17.09■□□□□ 0.33
SPCS3-204ENST00000513139 GDF11O95390 407 aa17.09■□□□□ 0.33
SPCS3-204ENST00000513139 ATN1P54259 1190 aaPredicted RBP17.09■□□□□ 0.33
SPCS3-204ENST00000513139 SMAD3P84022 425 aaKnown RBP17.09■□□□□ 0.33
SPCS3-204ENST00000513139 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
SPCS3-204ENST00000513139 SHHQ15465 462 aa17.09■□□□□ 0.33
SPCS3-204ENST00000513139 SHROOM1Q2M3G4 852 aaPredicted RBP17.09■□□□□ 0.33
SPCS3-204ENST00000513139 NAA16Q6N069 864 aaPredicted RBP17.09■□□□□ 0.33
SPCS3-204ENST00000513139 ATF7IPQ6VMQ6 1270 aa17.09■□□□□ 0.33
SPCS3-204ENST00000513139 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
SPCS3-204ENST00000513139 PALD1Q9ULE6 856 aa17.09■□□□□ 0.33
SPCS3-204ENST00000513139 IVNS1ABPQ9Y6Y0 642 aa17.09■□□□□ 0.33
SPCS3-204ENST00000513139 ZNFX1Q9P2E3 1918 aaKnown RBP17.09■□□□□ 0.33
SPCS3-204ENST00000513139 SMCHD1A6NHR9 2005 aa17.08■□□□□ 0.33
SPCS3-204ENST00000513139 IGHA2P01877 340 aa17.08■□□□□ 0.32
SPCS3-204ENST00000513139 GNAI3P08754 354 aa17.08■□□□□ 0.32
SPCS3-204ENST00000513139 CT47B1P0C2W7 299 aaPredicted RBP17.08■□□□□ 0.32
SPCS3-204ENST00000513139 CNGA1P29973 690 aa17.08■□□□□ 0.32
SPCS3-204ENST00000513139 GRB14Q14449 540 aa17.08■□□□□ 0.32
SPCS3-204ENST00000513139 MAPKAPK5Q8IW41 473 aa17.08■□□□□ 0.32
SPCS3-204ENST00000513139 SYMPKQ92797 1274 aaKnown RBP17.08■□□□□ 0.32
SPCS3-204ENST00000513139 NOB1Q9ULX3 412 aaKnown RBP17.08■□□□□ 0.32
SPCS3-204ENST00000513139 NCOR1O75376 2440 aa17.08■□□□□ 0.32
SPCS3-204ENST00000513139 HLA-DOAP06340 250 aa17.07■□□□□ 0.32
SPCS3-204ENST00000513139 USP14P54578 494 aa17.07■□□□□ 0.32
SPCS3-204ENST00000513139 SLC39A5Q6ZMH5 540 aa17.07■□□□□ 0.32
SPCS3-204ENST00000513139 CATSPERGQ6ZRH7 1159 aa17.07■□□□□ 0.32
SPCS3-204ENST00000513139 CYBAP13498 195 aa17.06■□□□□ 0.32
SPCS3-204ENST00000513139 CYP2C19P33261 490 aa17.06■□□□□ 0.32
SPCS3-204ENST00000513139 SNX17Q15036 470 aa17.06■□□□□ 0.32
SPCS3-204ENST00000513139 WDR78Q5VTH9 848 aa17.06■□□□□ 0.32
SPCS3-204ENST00000513139 KIAA1683Q9H0B3 1180 aa17.06■□□□□ 0.32
SPCS3-204ENST00000513139 ATP11BQ9Y2G3 1177 aa17.06■□□□□ 0.32
SPCS3-204ENST00000513139 MYO9BQ13459 2157 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 TMEM265A0A087WTH1 108 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 KBTBD13C9JR72 458 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 GH2P01242 217 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 C9orf50Q5SZB4 431 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 C1orf53Q5VUE5 145 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 OLFML2BQ68BL8 750 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 TATDN1Q6P1N9 297 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 TRPV1Q8NER1 839 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 NPLOC4Q8TAT6 608 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 FEZ1Q99689 392 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 TTYH1Q9H313 450 aaPredicted RBP17.05■□□□□ 0.32
SPCS3-204ENST00000513139 NDUFB9Q9Y6M9 179 aa17.05■□□□□ 0.32
SPCS3-204ENST00000513139 STRNO43815 780 aa17.04■□□□□ 0.32
SPCS3-204ENST00000513139 VCAM1P19320 739 aa17.04■□□□□ 0.32
SPCS3-204ENST00000513139 GJC2Q5T442 439 aaPredicted RBP17.04■□□□□ 0.32
SPCS3-204ENST00000513139 ADGRA1Q86SQ6 560 aa17.04■□□□□ 0.32
SPCS3-204ENST00000513139 CERS3Q8IU89 383 aa17.04■□□□□ 0.32
SPCS3-204ENST00000513139 MYLIPQ8WY64 445 aa17.04■□□□□ 0.32
SPCS3-204ENST00000513139 BADQ92934 168 aa17.04■□□□□ 0.32
SPCS3-204ENST00000513139 BTBD7Q9P203 1132 aa17.04■□□□□ 0.32
SPCS3-204ENST00000513139 FOSL2P15408 326 aa17.03■□□□□ 0.32
SPCS3-204ENST00000513139 G3BP1Q13283 466 aaKnown RBP eCLIP17.03■□□□□ 0.32
SPCS3-204ENST00000513139 ZYXQ15942 572 aaKnown RBP17.03■□□□□ 0.32
SPCS3-204ENST00000513139 TRMT2AQ8IZ69 625 aaKnown RBP17.03■□□□□ 0.32
SPCS3-204ENST00000513139 ARHGAP45Q92619 1136 aa17.03■□□□□ 0.32
SPCS3-204ENST00000513139 EHD4Q9H223 541 aa17.03■□□□□ 0.32
SPCS3-204ENST00000513139 GPR108Q9NPR9 543 aa17.03■□□□□ 0.32
SPCS3-204ENST00000513139 SAP30BPQ9UHR5 308 aaKnown RBP17.03■□□□□ 0.32
SPCS3-204ENST00000513139 A0A0G2JMZ2 1700 aa17.03■□□□□ 0.32
SPCS3-204ENST00000513139 SPDYE16A6NNV3 312 aaPredicted RBP17.02■□□□□ 0.32
SPCS3-204ENST00000513139 SEPT4O43236 478 aa17.02■□□□□ 0.32
SPCS3-204ENST00000513139 CYP2E1P05181 493 aaPredicted RBP17.02■□□□□ 0.32
SPCS3-204ENST00000513139 CCDC158Q5M9N0 1113 aa17.02■□□□□ 0.32
SPCS3-204ENST00000513139 DPP9Q86TI2 863 aa17.02■□□□□ 0.32
SPCS3-204ENST00000513139 ZNF512BQ96KM6 892 aaPredicted RBP17.02■□□□□ 0.32
SPCS3-204ENST00000513139 PRDM5Q9NQX1 630 aaPredicted RBP17.02■□□□□ 0.32
SPCS3-204ENST00000513139 PDLIM7Q9NR12 457 aa17.02■□□□□ 0.32
SPCS3-204ENST00000513139 SNRKQ9NRH2 765 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms