RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 SLC5A1P13866 664 aa11.42□□□□□ -0.58
NUP54-211ENST00000512151 PTPREP23469 700 aa11.42□□□□□ -0.58
NUP54-211ENST00000512151 ZNF384Q8TF68 577 aa11.42□□□□□ -0.58
NUP54-211ENST00000512151 TMOD4Q9NZQ9 345 aa11.42□□□□□ -0.58
NUP54-211ENST00000512151 TACC3Q9Y6A5 838 aa11.42□□□□□ -0.58
NUP54-211ENST00000512151 SIPA1L1O43166 1804 aa11.42□□□□□ -0.58
NUP54-211ENST00000512151 RAG1P15918 1043 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 PHKA1P46020 1223 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 MRE11P49959 708 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 GRB14Q14449 540 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 RASIP1Q5U651 963 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 LPIN2Q92539 896 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 FAM163AQ96GL9 167 aaPredicted RBP11.41□□□□□ -0.58
NUP54-211ENST00000512151 AS3MTQ9HBK9 375 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 EMILIN3Q9NT22 766 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 GPR37L1O60883 481 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 FAM47AQ5JRC9 791 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 TMEM240Q5SV17 173 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 PRAMEF19Q5SWL8 479 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 WDR78Q5VTH9 848 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 CCDC129Q6ZRS4 1044 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 CWC22Q9HCG8 908 aaKnown RBP11.41□□□□□ -0.58
NUP54-211ENST00000512151 BTBD7Q9P203 1132 aa11.41□□□□□ -0.58
NUP54-211ENST00000512151 REV3LO60673 3130 aa11.4□□□□□ -0.58
NUP54-211ENST00000512151 GPR75-ASB3A0A0A6YYF3 556 aa11.4□□□□□ -0.59
NUP54-211ENST00000512151 PQBP1O60828 265 aaKnown RBP11.4□□□□□ -0.59
NUP54-211ENST00000512151 RFX5P48382 616 aaPredicted RBP11.4□□□□□ -0.59
NUP54-211ENST00000512151 SLC4A10Q6U841 1118 aa11.4□□□□□ -0.59
NUP54-211ENST00000512151 ATG9AQ7Z3C6 839 aa11.4□□□□□ -0.59
NUP54-211ENST00000512151 MICALL1Q8N3F8 863 aa11.4□□□□□ -0.59
NUP54-211ENST00000512151 SRCIN1Q9C0H9 1055 aa11.4□□□□□ -0.59
NUP54-211ENST00000512151 NKX2-4Q9H2Z4 354 aa11.4□□□□□ -0.59
NUP54-211ENST00000512151 DNAJC18Q9H819 358 aa11.4□□□□□ -0.59
NUP54-211ENST00000512151 TMEM39AQ9NV64 488 aa11.4□□□□□ -0.59
NUP54-211ENST00000512151 PHF24Q9UPV7 400 aa11.4□□□□□ -0.59
NUP54-211ENST00000512151 YBX2Q9Y2T7 364 aaKnown RBP11.4□□□□□ -0.59
NUP54-211ENST00000512151 RABGAP1Q9Y3P9 1069 aa11.4□□□□□ -0.59
NUP54-211ENST00000512151 MROH7-TTC4A0A0A0MT08 1334 aa11.39□□□□□ -0.59
NUP54-211ENST00000512151 SMCHD1A6NHR9 2005 aa11.39□□□□□ -0.59
NUP54-211ENST00000512151 GBF1Q92538 1859 aa11.39□□□□□ -0.59
NUP54-211ENST00000512151 PRRC2BQ5JSZ5 2229 aaKnown RBP11.39□□□□□ -0.59
NUP54-211ENST00000512151 C19orf81C9J6K1 198 aa11.39□□□□□ -0.59
NUP54-211ENST00000512151 EYA2O00167 538 aa11.39□□□□□ -0.59
NUP54-211ENST00000512151 SEPT4O43236 478 aa11.39□□□□□ -0.59
NUP54-211ENST00000512151 ADORA1P30542 326 aa11.39□□□□□ -0.59
NUP54-211ENST00000512151 FAAP100Q0VG06 881 aa11.39□□□□□ -0.59
NUP54-211ENST00000512151 DZIP1Q86YF9 867 aaKnown RBP11.39□□□□□ -0.59
NUP54-211ENST00000512151 GTF3C2Q8WUA4 911 aaPredicted RBP11.39□□□□□ -0.59
NUP54-211ENST00000512151 DENND2AQ9ULE3 1009 aa11.39□□□□□ -0.59
NUP54-211ENST00000512151 CHD7Q9P2D1 2997 aa11.39□□□□□ -0.59
NUP54-211ENST00000512151 USP17L10C9JJH3 530 aa11.38□□□□□ -0.59
NUP54-211ENST00000512151 TLL1O43897 1013 aa11.38□□□□□ -0.59
NUP54-211ENST00000512151 GLRX3O76003 335 aaKnown RBP11.38□□□□□ -0.59
NUP54-211ENST00000512151 GDF11O95390 407 aa11.38□□□□□ -0.59
NUP54-211ENST00000512151 OLFML2BQ68BL8 750 aa11.38□□□□□ -0.59
NUP54-211ENST00000512151 DIEXFQ68CQ4 756 aaKnown RBP11.38□□□□□ -0.59
NUP54-211ENST00000512151 WWC1Q8IX03 1113 aa11.38□□□□□ -0.59
NUP54-211ENST00000512151 CD320Q9NPF0 282 aa11.38□□□□□ -0.59
NUP54-211ENST00000512151 FANCIQ9NVI1 1328 aa11.38□□□□□ -0.59
NUP54-211ENST00000512151 LRRC37A2A6NM11 1700 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 A0A1W2PQ45 241 aaPredicted RBP11.37□□□□□ -0.59
NUP54-211ENST00000512151 A0A1W2PQY0 241 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 ERC2O15083 957 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 COBLO75128 1261 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 ACRP10323 421 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 CCNA1P78396 465 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 MECOMQ03112 1051 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 RASGRF1Q13972 1273 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 ATP2B3Q16720 1220 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 SLC44A5Q8NCS7 719 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 GNL3LQ9NVN8 582 aaKnown RBP11.37□□□□□ -0.59
NUP54-211ENST00000512151 ABCF2Q9UG63 623 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 TBX21Q9UL17 535 aa11.37□□□□□ -0.59
NUP54-211ENST00000512151 CACNA1AO00555 2505 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 SEMA3EO15041 775 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 PGK1P00558 417 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 TIMP1P01033 207 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 ASNSP08243 561 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 ADORA2AP29274 412 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 EXOSC9Q06265 439 aaKnown RBP11.36□□□□□ -0.59
NUP54-211ENST00000512151 USP17L2Q6R6M4 530 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 ZNF365Q70YC5 407 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 ANKRD33Q7Z3H0 272 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 TSPYL2Q9H2G4 693 aaPredicted RBP11.36□□□□□ -0.59
NUP54-211ENST00000512151 PRKRIP1Q9H875 184 aaPredicted RBP11.36□□□□□ -0.59
NUP54-211ENST00000512151 HERC5Q9UII4 1024 aaKnown RBP11.36□□□□□ -0.59
NUP54-211ENST00000512151 ZBTB21Q9ULJ3 1066 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 IVNS1ABPQ9Y6Y0 642 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 XIRP2A4UGR9 3374 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 ZNF236Q9UL36 1845 aa11.36□□□□□ -0.59
NUP54-211ENST00000512151 SMIM22K7EJ46 135 aa11.35□□□□□ -0.59
NUP54-211ENST00000512151 CSF2RAP15509 400 aa11.35□□□□□ -0.59
NUP54-211ENST00000512151 ZYXQ15942 572 aaKnown RBP11.35□□□□□ -0.59
NUP54-211ENST00000512151 AAK1Q2M2I8 961 aa11.35□□□□□ -0.59
NUP54-211ENST00000512151 CCDC102BQ68D86 513 aa11.35□□□□□ -0.59
NUP54-211ENST00000512151 MFSD5Q6N075 450 aa11.35□□□□□ -0.59
NUP54-211ENST00000512151 CATSPERGQ6ZRH7 1159 aa11.35□□□□□ -0.59
NUP54-211ENST00000512151 DPP9Q86TI2 863 aa11.35□□□□□ -0.59
NUP54-211ENST00000512151 SLF2Q8IX21 1173 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms