RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 PABPC4Q13310 644 aaKnown RBP eCLIP19.78■□□□□ 0.76
DDX41-213ENST00000512027 ZMYM1Q5SVZ6 1142 aa19.78■□□□□ 0.76
DDX41-213ENST00000512027 USP17L2Q6R6M4 530 aa19.78■□□□□ 0.76
DDX41-213ENST00000512027 C16orf86Q6ZW13 317 aa19.78■□□□□ 0.76
DDX41-213ENST00000512027 CHD1LQ86WJ1 897 aa19.78■□□□□ 0.76
DDX41-213ENST00000512027 AMOTL1Q8IY63 956 aa19.78■□□□□ 0.76
DDX41-213ENST00000512027 SH3TC2Q8TF17 1288 aa19.78■□□□□ 0.76
DDX41-213ENST00000512027 P2RX7Q99572 595 aaKnown RBP19.78■□□□□ 0.76
DDX41-213ENST00000512027 SWAP70Q9UH65 585 aa19.78■□□□□ 0.76
DDX41-213ENST00000512027 GREB1LQ9C091 1923 aaPredicted RBP19.77■□□□□ 0.76
DDX41-213ENST00000512027 A0A1W2PRG0 241 aa19.77■□□□□ 0.76
DDX41-213ENST00000512027 RGS19P49795 217 aa19.77■□□□□ 0.76
DDX41-213ENST00000512027 NUCB1Q02818 461 aa19.77■□□□□ 0.76
DDX41-213ENST00000512027 PRKCZQ05513 592 aa19.77■□□□□ 0.76
DDX41-213ENST00000512027 ARPP21Q9UBL0 812 aaPredicted RBP19.77■□□□□ 0.76
DDX41-213ENST00000512027 SRRDQ9UH36 339 aa19.77■□□□□ 0.76
DDX41-213ENST00000512027 GABRQQ9UN88 632 aa19.77■□□□□ 0.76
DDX41-213ENST00000512027 RBBP6Q7Z6E9 1792 aaKnown RBP19.77■□□□□ 0.76
DDX41-213ENST00000512027 MYPNQ86TC9 1320 aa19.76■□□□□ 0.75
DDX41-213ENST00000512027 BRCA2P51587 3418 aa19.76■□□□□ 0.75
DDX41-213ENST00000512027 MINDY4BA8MYZ0 360 aa19.76■□□□□ 0.75
DDX41-213ENST00000512027 APPP05067 770 aa19.76■□□□□ 0.75
DDX41-213ENST00000512027 TDO2P48775 406 aa19.76■□□□□ 0.75
DDX41-213ENST00000512027 FCGRTP55899 365 aa19.76■□□□□ 0.75
DDX41-213ENST00000512027 FAM110CQ1W6H9 321 aa19.76■□□□□ 0.75
DDX41-213ENST00000512027 LRRFIP1Q32MZ4 808 aaKnown RBP19.76■□□□□ 0.75
DDX41-213ENST00000512027 SLC9C1Q4G0N8 1177 aa19.76■□□□□ 0.75
DDX41-213ENST00000512027 KIAA1683Q9H0B3 1180 aa19.76■□□□□ 0.75
DDX41-213ENST00000512027 VCAM1P19320 739 aa19.75■□□□□ 0.75
DDX41-213ENST00000512027 HOXA7P31268 230 aaPredicted RBP19.75■□□□□ 0.75
DDX41-213ENST00000512027 HERVK_113P62684 666 aa19.75■□□□□ 0.75
DDX41-213ENST00000512027 POTEEQ6S8J3 1075 aa19.75■□□□□ 0.75
DDX41-213ENST00000512027 TMEM179Q6ZVK1 233 aa19.75■□□□□ 0.75
DDX41-213ENST00000512027 PLEKHM2Q8IWE5 1019 aa19.75■□□□□ 0.75
DDX41-213ENST00000512027 ARMC5Q96C12 935 aa19.75■□□□□ 0.75
DDX41-213ENST00000512027 EVI5LQ96CN4 794 aa19.75■□□□□ 0.75
DDX41-213ENST00000512027 C12orf42Q96LP6 360 aa19.75■□□□□ 0.75
DDX41-213ENST00000512027 TXNRD2Q9NNW7 524 aa19.75■□□□□ 0.75
DDX41-213ENST00000512027 PLXNB2O15031 1838 aa19.74■□□□□ 0.75
DDX41-213ENST00000512027 POTEFA5A3E0 1075 aa19.74■□□□□ 0.75
DDX41-213ENST00000512027 TNPO2O14787 897 aaKnown RBP19.74■□□□□ 0.75
DDX41-213ENST00000512027 GNRH1P01148 92 aa19.74■□□□□ 0.75
DDX41-213ENST00000512027 GCLCP48506 637 aaPredicted RBP19.74■□□□□ 0.75
DDX41-213ENST00000512027 SBK1Q52WX2 424 aa19.74■□□□□ 0.75
DDX41-213ENST00000512027 KIAA1755Q5JYT7 1200 aa19.74■□□□□ 0.75
DDX41-213ENST00000512027 SIAH1Q8IUQ4 282 aa19.74■□□□□ 0.75
DDX41-213ENST00000512027 IFNL3Q8IZI9 196 aa19.74■□□□□ 0.75
DDX41-213ENST00000512027 ZNF333Q96JL9 665 aa19.74■□□□□ 0.75
DDX41-213ENST00000512027 ROBO3Q96MS0 1386 aa19.73■□□□□ 0.75
DDX41-213ENST00000512027 TRIM6-TRIM34B2RNG4 842 aa19.73■□□□□ 0.75
DDX41-213ENST00000512027 PATL2C9JE40 543 aaKnown RBP19.73■□□□□ 0.75
DDX41-213ENST00000512027 FOXP2O15409 715 aa19.73■□□□□ 0.75
DDX41-213ENST00000512027 GNAT2P19087 354 aa19.73■□□□□ 0.75
DDX41-213ENST00000512027 MLLT1Q03111 559 aaPredicted RBP19.73■□□□□ 0.75
DDX41-213ENST00000512027 ICA1Q05084 483 aa19.73■□□□□ 0.75
DDX41-213ENST00000512027 GIMAP6Q6P9H5 292 aa19.73■□□□□ 0.75
DDX41-213ENST00000512027 RAET1EQ8TD07 263 aa19.73■□□□□ 0.75
DDX41-213ENST00000512027 FAM227BQ96M60 508 aa19.73■□□□□ 0.75
DDX41-213ENST00000512027 PAGR1Q9BTK6 254 aa19.73■□□□□ 0.75
DDX41-213ENST00000512027 KIAA0100Q14667 2235 aaKnown RBP19.73■□□□□ 0.75
DDX41-213ENST00000512027 RLFQ13129 1914 aa19.72■□□□□ 0.75
DDX41-213ENST00000512027 PARP14Q460N5 1801 aa19.72■□□□□ 0.75
DDX41-213ENST00000512027 A0A0D9SFI3 127 aa19.72■□□□□ 0.75
DDX41-213ENST00000512027 PRDM1O75626 825 aa19.72■□□□□ 0.75
DDX41-213ENST00000512027 RASA1P20936 1047 aa19.72■□□□□ 0.75
DDX41-213ENST00000512027 USP14P54578 494 aa19.72■□□□□ 0.75
DDX41-213ENST00000512027 VPS53Q5VIR6 699 aa19.72■□□□□ 0.75
DDX41-213ENST00000512027 RILPL2Q969X0 211 aa19.72■□□□□ 0.75
DDX41-213ENST00000512027 RPAP3Q9H6T3 665 aaPredicted RBP19.72■□□□□ 0.75
DDX41-213ENST00000512027 RBPJLQ9UBG7 517 aa19.72■□□□□ 0.75
DDX41-213ENST00000512027 MORF4L1Q9UBU8 362 aa19.72■□□□□ 0.75
DDX41-213ENST00000512027 MYH4Q9Y623 1939 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 USP17L15C9J2P7 530 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 USP17L13C9JLJ4 530 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 USP17L11C9JVI0 530 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 USP17L18D6R9N7 530 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 USP17L22D6RA61 530 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 USP17L17D6RBQ6 530 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 USP17L19D6RCP7 530 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 USP17L20D6RJB6 530 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 HOXD10P28358 340 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 FLT3LGP49771 235 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 PRMT2P55345 433 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 ATP2B2Q01814 1243 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 USP17L24Q0WX57 530 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 CATSPERGQ6ZRH7 1159 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 CCDC17Q96LX7 622 aa19.71■□□□□ 0.75
DDX41-213ENST00000512027 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.71■□□□□ 0.75
DDX41-213ENST00000512027 EEF2P13639 858 aaKnown RBP19.7■□□□□ 0.74
DDX41-213ENST00000512027 PDE4AP27815 886 aa19.7■□□□□ 0.74
DDX41-213ENST00000512027 NMIQ13287 307 aaPredicted RBP19.7■□□□□ 0.74
DDX41-213ENST00000512027 Q3C1V9 767 aa19.7■□□□□ 0.74
DDX41-213ENST00000512027 SPICE1Q8N0Z3 855 aa19.7■□□□□ 0.74
DDX41-213ENST00000512027 TAOK2Q9UL54 1235 aa19.7■□□□□ 0.74
DDX41-213ENST00000512027 A0A0G2JMZ2 1700 aa19.7■□□□□ 0.74
DDX41-213ENST00000512027 CNMDO75829 334 aa19.69■□□□□ 0.74
DDX41-213ENST00000512027 ELNP15502 786 aa19.69■□□□□ 0.74
DDX41-213ENST00000512027 GRK4P32298 578 aa19.69■□□□□ 0.74
DDX41-213ENST00000512027 MTFR1Q15390 333 aa19.69■□□□□ 0.74
DDX41-213ENST00000512027 NBPF11Q86T75 865 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms