RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 RGS19P49795 217 aa19.32■□□□□ 0.68
PDLIM5-216ENST00000511767 TMEM179Q6ZVK1 233 aa19.32■□□□□ 0.68
PDLIM5-216ENST00000511767 TRIM47Q96LD4 638 aa19.32■□□□□ 0.68
PDLIM5-216ENST00000511767 C12orf42Q96LP6 360 aa19.32■□□□□ 0.68
PDLIM5-216ENST00000511767 HELLSQ9NRZ9 838 aa19.32■□□□□ 0.68
PDLIM5-216ENST00000511767 ARPP21Q9UBL0 812 aaPredicted RBP19.32■□□□□ 0.68
PDLIM5-216ENST00000511767 PNMA3Q9UL41 463 aa19.32■□□□□ 0.68
PDLIM5-216ENST00000511767 ATAD5Q96QE3 1844 aa19.31■□□□□ 0.68
PDLIM5-216ENST00000511767 GCLCP48506 637 aaPredicted RBP19.31■□□□□ 0.68
PDLIM5-216ENST00000511767 USP14P54578 494 aa19.31■□□□□ 0.68
PDLIM5-216ENST00000511767 CCDC129Q6ZRS4 1044 aa19.31■□□□□ 0.68
PDLIM5-216ENST00000511767 ANKRD13CQ8N6S4 541 aa19.31■□□□□ 0.68
PDLIM5-216ENST00000511767 SMCR8Q8TEV9 937 aaPredicted RBP19.31■□□□□ 0.68
PDLIM5-216ENST00000511767 BAZ2AQ9UIF9 1905 aaKnown RBP19.31■□□□□ 0.68
PDLIM5-216ENST00000511767 TRIM6-TRIM34B2RNG4 842 aa19.3■□□□□ 0.68
PDLIM5-216ENST00000511767 FOXP2O15409 715 aa19.3■□□□□ 0.68
PDLIM5-216ENST00000511767 ECM2O94769 699 aaPredicted RBP19.3■□□□□ 0.68
PDLIM5-216ENST00000511767 FMNL1O95466 1100 aaPredicted RBP19.3■□□□□ 0.68
PDLIM5-216ENST00000511767 PDE4AP27815 886 aa19.3■□□□□ 0.68
PDLIM5-216ENST00000511767 POTEEQ6S8J3 1075 aa19.3■□□□□ 0.68
PDLIM5-216ENST00000511767 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.3■□□□□ 0.68
PDLIM5-216ENST00000511767 HOXD10P28358 340 aa19.29■□□□□ 0.68
PDLIM5-216ENST00000511767 PRMT2P55345 433 aa19.29■□□□□ 0.68
PDLIM5-216ENST00000511767 MCMDC2Q4G0Z9 681 aa19.29■□□□□ 0.68
PDLIM5-216ENST00000511767 CATSPERGQ6ZRH7 1159 aa19.29■□□□□ 0.68
PDLIM5-216ENST00000511767 RILPL2Q969X0 211 aa19.29■□□□□ 0.68
PDLIM5-216ENST00000511767 FAM227BQ96M60 508 aa19.29■□□□□ 0.68
PDLIM5-216ENST00000511767 NACAP1Q9BZK3 213 aa19.29■□□□□ 0.68
PDLIM5-216ENST00000511767 RBPJLQ9UBG7 517 aa19.29■□□□□ 0.68
PDLIM5-216ENST00000511767 SRRDQ9UH36 339 aa19.29■□□□□ 0.68
PDLIM5-216ENST00000511767 PTCH2Q9Y6C5 1203 aa19.29■□□□□ 0.68
PDLIM5-216ENST00000511767 DDX60LQ5H9U9 1706 aaKnown RBP19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 USP17L15C9J2P7 530 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 USP17L13C9JLJ4 530 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 USP17L11C9JVI0 530 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 USP17L18D6R9N7 530 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 USP17L22D6RA61 530 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 USP17L17D6RBQ6 530 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 USP17L19D6RCP7 530 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 USP17L20D6RJB6 530 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 SDSP20132 328 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 RASA1P20936 1047 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 TDO2P48775 406 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 USP17L24Q0WX57 530 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 ALX1Q15699 326 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 ZYXQ15942 572 aaKnown RBP19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 STK11IPQ8N1F8 1099 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 FEZ1Q99689 392 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 KANSL2Q9H9L4 492 aa19.28■□□□□ 0.68
PDLIM5-216ENST00000511767 NAV1Q8NEY1 1877 aa19.27■□□□□ 0.68
PDLIM5-216ENST00000511767 HERVK_113P62684 666 aa19.27■□□□□ 0.68
PDLIM5-216ENST00000511767 IRX3P78415 501 aaPredicted RBP19.27■□□□□ 0.68
PDLIM5-216ENST00000511767 FAM110CQ1W6H9 321 aa19.27■□□□□ 0.68
PDLIM5-216ENST00000511767 Q3C1V9 767 aa19.27■□□□□ 0.68
PDLIM5-216ENST00000511767 KIAA1755Q5JYT7 1200 aa19.27■□□□□ 0.68
PDLIM5-216ENST00000511767 VPS53Q5VIR6 699 aa19.27■□□□□ 0.68
PDLIM5-216ENST00000511767 ARMC5Q96C12 935 aa19.27■□□□□ 0.68
PDLIM5-216ENST00000511767 MKNK2Q9HBH9 465 aa19.27■□□□□ 0.68
PDLIM5-216ENST00000511767 MORF4L1Q9UBU8 362 aa19.27■□□□□ 0.68
PDLIM5-216ENST00000511767 TMX2Q9Y320 296 aa19.27■□□□□ 0.68
PDLIM5-216ENST00000511767 A0A0D9SFI3 127 aa19.26■□□□□ 0.67
PDLIM5-216ENST00000511767 PEX10O60683 326 aa19.26■□□□□ 0.67
PDLIM5-216ENST00000511767 EEF2P13639 858 aaKnown RBP19.26■□□□□ 0.67
PDLIM5-216ENST00000511767 FCGRTP55899 365 aa19.26■□□□□ 0.67
PDLIM5-216ENST00000511767 NMIQ13287 307 aaPredicted RBP19.26■□□□□ 0.67
PDLIM5-216ENST00000511767 CLEC10AQ8IUN9 316 aa19.26■□□□□ 0.67
PDLIM5-216ENST00000511767 ZNF444Q8N0Y2 327 aaPredicted RBP19.26■□□□□ 0.67
PDLIM5-216ENST00000511767 TXNRD2Q9NNW7 524 aa19.26■□□□□ 0.67
PDLIM5-216ENST00000511767 VCAM1P19320 739 aa19.25■□□□□ 0.67
PDLIM5-216ENST00000511767 NAPBQ9H115 298 aa19.25■□□□□ 0.67
PDLIM5-216ENST00000511767 GABRQQ9UN88 632 aa19.25■□□□□ 0.67
PDLIM5-216ENST00000511767 FGAP02671 866 aa19.24■□□□□ 0.67
PDLIM5-216ENST00000511767 ICA1Q05084 483 aa19.24■□□□□ 0.67
PDLIM5-216ENST00000511767 PPARAQ07869 468 aa19.24■□□□□ 0.67
PDLIM5-216ENST00000511767 GPRC5AQ8NFJ5 357 aa19.24■□□□□ 0.67
PDLIM5-216ENST00000511767 ARHGEF10LQ9HCE6 1279 aa19.24■□□□□ 0.67
PDLIM5-216ENST00000511767 INCENPQ9NQS7 918 aa19.24■□□□□ 0.67
PDLIM5-216ENST00000511767 GJD2Q9UKL4 321 aa19.24■□□□□ 0.67
PDLIM5-216ENST00000511767 DOCK3Q8IZD9 2030 aa19.24■□□□□ 0.67
PDLIM5-216ENST00000511767 ROBO3Q96MS0 1386 aa19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 IGKV6D-41A0A0C4DH26 115 aa19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 PRDM1O75626 825 aa19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 HSPD1P10809 573 aaKnown RBP19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 SOX10P56693 466 aa19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 COG2Q14746 738 aa19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 NBPF11Q86T75 865 aa19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 ZNF589Q86UQ0 364 aaPredicted RBP19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 RPAP3Q9H6T3 665 aaPredicted RBP19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 VCPKMTQ9H867 229 aa19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 ZNF287Q9HBT7 754 aa19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 HOXC10Q9NYD6 342 aa19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 TACC3Q9Y6A5 838 aa19.23■□□□□ 0.67
PDLIM5-216ENST00000511767 LOC285556D6RIA3 1793 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 TNPO2O14787 897 aaKnown RBP19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 CNMDO75829 334 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 FGRP09769 529 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 FLT3LGP49771 235 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 PRKCZQ05513 592 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 LBX2Q6XYB7 198 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 NEDD1Q8NHV4 660 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms