RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 FEZ1Q99689 392 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 DSCC1Q9BVC3 393 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 R3HDMLQ9H3Y0 253 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 ANAPC4Q9UJX5 808 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 RAD50Q92878 1312 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 LAMB1P07942 1786 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 BAZ2AQ9UIF9 1905 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 TLR2O60603 784 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 FKTNO75072 461 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 RASA1P20936 1047 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 USP14P54578 494 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 ZYXQ15942 572 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 COL13A1Q5TAT6 717 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 ACER1Q8TDN7 264 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 ZNF296Q8WUU4 475 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 PARK7Q99497 189 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 KIAA1683Q9H0B3 1180 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 KANSL2Q9H9L4 492 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 ARHGEF10LQ9HCE6 1279 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 CTNNA3Q9UI47 895 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 PNMA3Q9UL41 463 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 ZMYM6O95789 1325 aa8.5□□□□□ -1.05
PDLIM5-215ENST00000511586 A0A1W2PRG0 241 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 ZNF213O14771 459 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 PRDM1O75626 825 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 CYP2C8P10632 490 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 OSBPP22059 807 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 HOXA7P31268 230 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 SP3Q02447 781 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 ICA1Q05084 483 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 CTDSPL2Q05D32 466 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 DGKZQ13574 1117 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 TREML2Q5T2D2 321 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 C12orf42Q96LP6 360 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 SH2D4AQ9H788 454 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 EMILIN3Q9NT22 766 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 TMX2Q9Y320 296 aa8.49□□□□□ -1.05
PDLIM5-215ENST00000511586 PHIPQ8WWQ0 1821 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 ATAD5Q96QE3 1844 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 TSPY2A6NKD2 308 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 SGSM2O43147 1006 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 ORC4O43929 436 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 FGRP09769 529 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 TSPY3P0CV98 308 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 TSPY8P0CW00 308 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 PCP11498 1178 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 EEF2P13639 858 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 HAND2P61296 217 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 IRX3P78415 501 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 TFAP4Q01664 338 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 ATP2B2Q01814 1243 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 IMMTQ16891 758 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 FAM47AQ5JRC9 791 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 CASC1Q6TDU7 716 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 C17orf99Q6UX52 265 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 SIAH1Q8IUQ4 282 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 NEDD1Q8NHV4 660 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 SMCR8Q8TEV9 937 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 STAG1Q8WVM7 1258 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 ERO1AQ96HE7 468 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 ASCC2Q9H1I8 757 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 IL25Q9H293 177 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 RNF41Q9H4P4 317 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 INCENPQ9NQS7 918 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 NYAP2Q9P242 653 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 CPA4Q9UI42 421 aa8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.48□□□□□ -1.05
PDLIM5-215ENST00000511586 IGKV6D-41A0A0C4DH26 115 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 USP17L15C9J2P7 530 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 USP17L13C9JLJ4 530 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 USP17L11C9JVI0 530 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 USP17L18D6R9N7 530 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 USP17L22D6RA61 530 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 USP17L17D6RBQ6 530 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 USP17L19D6RCP7 530 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 USP17L20D6RJB6 530 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 RANBP6O60518 1105 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 TTLL1O95922 423 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 VCAM1P19320 739 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 GCLCP48506 637 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 NT5C2P49902 561 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 USP17L24Q0WX57 530 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 KIF22Q14807 665 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 ARHGEF6Q15052 776 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 PPP4R3BQ5MIZ7 849 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 AKNAD1Q5T1N1 836 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 MFSD6Q6ZSS7 791 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 KIAA1211Q6ZU35 1233 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 CTU1Q7Z7A3 348 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 CLEC10AQ8IUN9 316 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 TNS4Q8IZW8 715 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 LPAR1Q92633 364 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 CEP95Q96GE4 821 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 VCPKMTQ9H867 229 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 GOPCQ9HD26 462 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 TOMM22Q9NS69 142 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 MTMR4Q9NYA4 1195 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 CLIP2Q9UDT6 1046 aa8.47□□□□□ -1.05
PDLIM5-215ENST00000511586 U3KPZ7 1027 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms