RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SLC6A18Q96N87 628 aa7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 METTL14Q9HCE5 456 aaKnown RBP7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 CYP4F12Q9HCS2 524 aa7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 ANKRD34BA5PLL1 514 aa7.74□□□□□ -1.17
HMGB1P47-201ENST00000511281 WISP1O95388 367 aa7.74□□□□□ -1.17
HMGB1P47-201ENST00000511281 ASMTLO95671 621 aa7.74□□□□□ -1.17
HMGB1P47-201ENST00000511281 SOX4Q06945 474 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P47-201ENST00000511281 NKG7Q16617 165 aa7.74□□□□□ -1.17
HMGB1P47-201ENST00000511281 KISS1RQ969F8 398 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P47-201ENST00000511281 TYW1Q9NV66 732 aaKnown RBP7.74□□□□□ -1.17
HMGB1P47-201ENST00000511281 AMPD1P23109 780 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 RAC1P63000 192 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 TM4SF20Q53R12 229 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 ANKRD39Q53RE8 183 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 AKAP4Q5JQC9 854 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 TRAPPC3LQ5T215 181 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 NUTM2GQ5VZR2 741 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 LYPD4Q6UWN0 246 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 PHACTR4Q8IZ21 702 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 ZNF513Q8N8E2 541 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 NINJ1Q92982 152 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 KIF2CQ99661 725 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 KLHL25Q9H0H3 589 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 PICK1Q9NRD5 415 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 CD2APQ9Y5K6 639 aa7.73□□□□□ -1.17
HMGB1P47-201ENST00000511281 A0A1W2PQU0 124 aa7.72□□□□□ -1.17
HMGB1P47-201ENST00000511281 AGRPO00253 132 aa7.72□□□□□ -1.17
HMGB1P47-201ENST00000511281 TTLL4Q14679 1199 aa7.72□□□□□ -1.17
HMGB1P47-201ENST00000511281 IGF2-ASQ6U949 168 aa7.72□□□□□ -1.17
HMGB1P47-201ENST00000511281 TMEM130Q8N3G9 435 aa7.72□□□□□ -1.17
HMGB1P47-201ENST00000511281 ISL2Q96A47 359 aa7.72□□□□□ -1.17
HMGB1P47-201ENST00000511281 TRIM11Q96F44 468 aa7.72□□□□□ -1.17
HMGB1P47-201ENST00000511281 HAUS7Q99871 368 aa7.72□□□□□ -1.17
HMGB1P47-201ENST00000511281 MRPL18Q9H0U6 180 aaKnown RBP7.72□□□□□ -1.17
HMGB1P47-201ENST00000511281 ARHGEF4Q9NR80 690 aa7.72□□□□□ -1.17
HMGB1P47-201ENST00000511281 COL17A1Q9UMD9 1497 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P47-201ENST00000511281 CBFA2T2O43439 604 aa7.71□□□□□ -1.18
HMGB1P47-201ENST00000511281 CLEC3AO75596 197 aa7.71□□□□□ -1.18
HMGB1P47-201ENST00000511281 PRAMEF13Q5VWM6 474 aa7.71□□□□□ -1.18
HMGB1P47-201ENST00000511281 LINC00114Q6XXX2 140 aa7.71□□□□□ -1.18
HMGB1P47-201ENST00000511281 UBE3DQ7Z6J8 389 aa7.71□□□□□ -1.18
HMGB1P47-201ENST00000511281 PPP1R13LQ8WUF5 828 aa7.71□□□□□ -1.18
HMGB1P47-201ENST00000511281 VWCEQ96DN2 955 aa7.71□□□□□ -1.18
HMGB1P47-201ENST00000511281 MFSD3Q96ES6 412 aa7.71□□□□□ -1.18
HMGB1P47-201ENST00000511281 APBA2Q99767 749 aa7.71□□□□□ -1.18
HMGB1P47-201ENST00000511281 AP4E1Q9UPM8 1137 aa7.71□□□□□ -1.18
HMGB1P47-201ENST00000511281 C9IYK1 514 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 PLD2O14939 933 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 LRIG2O94898 1065 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 ELNP15502 786 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 GBP1P32455 592 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 FNDC3BQ53EP0 1204 aaKnown RBP7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 FOXB2Q5VYV0 432 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 ANKRD34AQ69YU3 496 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 ACAD11Q709F0 780 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 CDC37L1Q7L3B6 337 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 MFSD2AQ8NA29 543 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 C2CD4AQ8NCU7 369 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 BAHD1Q8TBE0 780 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 EXOC2Q96KP1 924 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 FOXQ1Q9C009 403 aa7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 NCOA5Q9HCD5 579 aaKnown RBP7.7□□□□□ -1.18
HMGB1P47-201ENST00000511281 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 FAM86C2PA6NEL3 165 aa7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 SPDYE3A6NKU9 549 aa7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 KCNQ2O43526 872 aa7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 EPHX1P07099 455 aa7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 FGFR1P11362 822 aa7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 HSP90AA2PQ14568 343 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 AXDND1Q5T1B0 1012 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 Q6ZS46 218 aa7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 DNAJB8Q8NHS0 232 aa7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 AARSD1Q9BTE6 412 aaKnown RBP7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 DHRS4Q9BTZ2 278 aa7.69□□□□□ -1.18
HMGB1P47-201ENST00000511281 DNAJC25-GNG10A0A024R161 153 aa7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 TRAV20A0A0B4J274 112 aa7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 HCLS1P14317 486 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 SV2CQ496J9 727 aa7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 NBPF12Q5TAG4 269 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 HEATR6Q6AI08 1181 aaKnown RBP7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 THNSL2Q86YJ6 484 aa7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 SCUBE1Q8IWY4 988 aa7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 NIM1KQ8IY84 436 aa7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 SMYD4Q8IYR2 804 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 RCC1LQ96I51 464 aaKnown RBP7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 DPH2Q9BQC3 489 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 MRPL4Q9BYD3 311 aaKnown RBP7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 FAM105AQ9NUU6 356 aa7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 PCOLCE2Q9UKZ9 415 aa7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 MRPS23Q9Y3D9 190 aaKnown RBP7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 ACTL7BQ9Y614 415 aa7.68□□□□□ -1.18
HMGB1P47-201ENST00000511281 A0A087WZG4 1122 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 A0A087X0B3 334 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 KRBA1A5PL33 1030 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 PIK3R2O00459 728 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 STAT3P40763 770 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 ASPAP45381 313 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 PPP2R2AP63151 447 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms