RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ECM29Q5VYK3 1845 aa10.59□□□□□ -0.71
PDPN-209ENST00000510906 SREBF2Q12772 1141 aa10.59□□□□□ -0.71
PDPN-209ENST00000510906 NFIAQ12857 509 aa10.59□□□□□ -0.71
PDPN-209ENST00000510906 TJAP1Q5JTD0 557 aa10.59□□□□□ -0.71
PDPN-209ENST00000510906 FKBP1CQ5VVH2 108 aa10.59□□□□□ -0.71
PDPN-209ENST00000510906 PI16Q6UXB8 463 aa10.59□□□□□ -0.71
PDPN-209ENST00000510906 FAM83AQ86UY5 434 aa10.59□□□□□ -0.71
PDPN-209ENST00000510906 ANKRD13AQ8IZ07 590 aa10.59□□□□□ -0.71
PDPN-209ENST00000510906 MCOLN1Q9GZU1 580 aa10.59□□□□□ -0.71
PDPN-209ENST00000510906 ELP3Q9H9T3 547 aa10.59□□□□□ -0.71
PDPN-209ENST00000510906 ABCF2Q9UG63 623 aa10.59□□□□□ -0.71
PDPN-209ENST00000510906 PDS5AQ29RF7 1337 aaKnown RBP10.58□□□□□ -0.71
PDPN-209ENST00000510906 MANSC4A6NHS7 340 aaPredicted RBP10.58□□□□□ -0.72
PDPN-209ENST00000510906 UNCXA6NJT0 531 aa10.58□□□□□ -0.72
PDPN-209ENST00000510906 SURF6O75683 361 aaKnown RBP10.58□□□□□ -0.72
PDPN-209ENST00000510906 ZBTB48P10074 688 aaPredicted RBP10.58□□□□□ -0.72
PDPN-209ENST00000510906 CTHP32929 405 aa10.58□□□□□ -0.72
PDPN-209ENST00000510906 OS9Q13438 667 aaPredicted RBP10.58□□□□□ -0.72
PDPN-209ENST00000510906 DGKZQ13574 1117 aa10.58□□□□□ -0.72
PDPN-209ENST00000510906 VGLL4Q14135 290 aa10.58□□□□□ -0.72
PDPN-209ENST00000510906 GORABQ5T7V8 394 aa10.58□□□□□ -0.72
PDPN-209ENST00000510906 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.58□□□□□ -0.72
PDPN-209ENST00000510906 ARMC2Q8NEN0 867 aa10.58□□□□□ -0.72
PDPN-209ENST00000510906 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.58□□□□□ -0.72
PDPN-209ENST00000510906 R3HDMLQ9H3Y0 253 aa10.58□□□□□ -0.72
PDPN-209ENST00000510906 USP40Q9NVE5 1235 aa10.58□□□□□ -0.72
PDPN-209ENST00000510906 HMG20BQ9P0W2 317 aa10.58□□□□□ -0.72
PDPN-209ENST00000510906 IGF2BP3O00425 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
PDPN-209ENST00000510906 TCP10Q12799 353 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 TNNI3KQ59H18 835 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 CEP85Q6P2H3 762 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 PDXDC2PQ6P474 469 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 TBC1D9Q6ZT07 1266 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 DZIP1Q86YF9 867 aaKnown RBP10.57□□□□□ -0.72
PDPN-209ENST00000510906 ZGPATQ8N5A5 531 aaKnown RBP10.57□□□□□ -0.72
PDPN-209ENST00000510906 SPATA5Q8NB90 893 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 ZNF384Q8TF68 577 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 FAM151AQ8WW52 585 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 OPTNQ96CV9 577 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 DBNDD2Q9BQY9 259 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 OCSTAMPQ9BR26 566 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 FPGT-TNNI3KV9GXZ4 949 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 CASP8AP2Q9UKL3 1982 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 GAKO14976 1311 aa10.57□□□□□ -0.72
PDPN-209ENST00000510906 RPAP1Q9BWH6 1393 aaPredicted RBP10.56□□□□□ -0.72
PDPN-209ENST00000510906 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.56□□□□□ -0.72
PDPN-209ENST00000510906 ARID4AP29374 1257 aaPredicted RBP10.56□□□□□ -0.72
PDPN-209ENST00000510906 MCAMP43121 646 aa10.56□□□□□ -0.72
PDPN-209ENST00000510906 MECOMQ03112 1051 aa10.56□□□□□ -0.72
PDPN-209ENST00000510906 SPTY2D1Q68D10 685 aaPredicted RBP10.56□□□□□ -0.72
PDPN-209ENST00000510906 MIGA2Q7L4E1 593 aa10.56□□□□□ -0.72
PDPN-209ENST00000510906 ZFPM1Q8IX07 1006 aa10.56□□□□□ -0.72
PDPN-209ENST00000510906 ZNF296Q8WUU4 475 aaPredicted RBP10.56□□□□□ -0.72
PDPN-209ENST00000510906 WRNIP1Q96S55 665 aa10.56□□□□□ -0.72
PDPN-209ENST00000510906 IL21Q9HBE4 155 aa10.56□□□□□ -0.72
PDPN-209ENST00000510906 GPR108Q9NPR9 543 aa10.56□□□□□ -0.72
PDPN-209ENST00000510906 RCAN3Q9UKA8 241 aa10.56□□□□□ -0.72
PDPN-209ENST00000510906 NOP58Q9Y2X3 529 aaKnown RBP10.56□□□□□ -0.72
PDPN-209ENST00000510906 MAFBQ9Y5Q3 323 aaPredicted RBP10.56□□□□□ -0.72
PDPN-209ENST00000510906 CSADQ9Y600 493 aa10.56□□□□□ -0.72
PDPN-209ENST00000510906 GPR25O00155 361 aa10.55□□□□□ -0.72
PDPN-209ENST00000510906 UQCRFS1P1P0C7P4 283 aa10.55□□□□□ -0.72
PDPN-209ENST00000510906 BTDP43251 543 aa10.55□□□□□ -0.72
PDPN-209ENST00000510906 INHBEP58166 350 aa10.55□□□□□ -0.72
PDPN-209ENST00000510906 TTC39AQ5SRH9 613 aa10.55□□□□□ -0.72
PDPN-209ENST00000510906 DCAF15Q66K64 600 aa10.55□□□□□ -0.72
PDPN-209ENST00000510906 ZKSCAN4Q969J2 545 aaPredicted RBP10.55□□□□□ -0.72
PDPN-209ENST00000510906 HOOK2Q96ED9 719 aa10.55□□□□□ -0.72
PDPN-209ENST00000510906 PTPN18Q99952 460 aa10.55□□□□□ -0.72
PDPN-209ENST00000510906 CFHR5Q9BXR6 569 aa10.55□□□□□ -0.72
PDPN-209ENST00000510906 TLR7Q9NYK1 1049 aaKnown RBP10.55□□□□□ -0.72
PDPN-209ENST00000510906 TFIP11Q9UBB9 837 aaKnown RBP10.55□□□□□ -0.72
PDPN-209ENST00000510906 SNCAIPQ9Y6H5 919 aa10.55□□□□□ -0.72
PDPN-209ENST00000510906 MROH7-TTC4A0A0A0MT08 1334 aa10.55□□□□□ -0.72
PDPN-209ENST00000510906 RFX7Q2KHR2 1363 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 COL6A3P12111 3177 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 WDHD1O75717 1129 aaPredicted RBP10.54□□□□□ -0.72
PDPN-209ENST00000510906 ALDH1A1P00352 501 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 INPP5BP32019 993 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 RGS3P49796 1198 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 SH3BP5LQ7L8J4 393 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 CTU1Q7Z7A3 348 aaKnown RBP10.54□□□□□ -0.72
PDPN-209ENST00000510906 BRI3BPQ8WY22 251 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 NSUN4Q96CB9 384 aaKnown RBP10.54□□□□□ -0.72
PDPN-209ENST00000510906 EAF2Q96CJ1 260 aaPredicted RBP10.54□□□□□ -0.72
PDPN-209ENST00000510906 IDI2Q9BXS1 227 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 ZNF341Q9BYN7 854 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 CCDC8Q9H0W5 538 aaPredicted RBP10.54□□□□□ -0.72
PDPN-209ENST00000510906 DDX4Q9NQI0 724 aaKnown RBP10.54□□□□□ -0.72
PDPN-209ENST00000510906 RAI14Q9P0K7 980 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 DBNLQ9UJU6 430 aaKnown RBP10.54□□□□□ -0.72
PDPN-209ENST00000510906 EXOC6BQ9Y2D4 811 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 MYH13Q9UKX3 1938 aa10.54□□□□□ -0.72
PDPN-209ENST00000510906 AKAP11Q9UKA4 1901 aa10.53□□□□□ -0.72
PDPN-209ENST00000510906 GPR75-ASB3A0A0A6YYF3 556 aa10.53□□□□□ -0.72
PDPN-209ENST00000510906 DLL1O00548 723 aa10.53□□□□□ -0.72
PDPN-209ENST00000510906 ATP9BO43861 1147 aa10.53□□□□□ -0.72
PDPN-209ENST00000510906 ENTPD3O75355 529 aa10.53□□□□□ -0.72
PDPN-209ENST00000510906 RHBDL3P58872 404 aa10.53□□□□□ -0.72
PDPN-209ENST00000510906 PTK2Q05397 1052 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms