RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 V9GYY5 206 aaPredicted RBP10.53□□□□□ -0.72
PDGFRA-208ENST00000509490 CASZ1Q86V15 1759 aa10.53□□□□□ -0.72
PDGFRA-208ENST00000509490 COL5A3P25940 1745 aaPredicted RBP10.52□□□□□ -0.72
PDGFRA-208ENST00000509490 AKR1B15C9JRZ8 316 aaPredicted RBP10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 FOXN1O15353 648 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 DDAH1O94760 285 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 APPP05067 770 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 CC2D1AQ6P1N0 951 aaPredicted RBP10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 ZNF662Q6ZS27 426 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 SYNE4Q8N205 404 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 MSANTD4Q8NCY6 345 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 FBXW7Q969H0 707 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 PSD3Q9NYI0 1048 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 PCDHB6Q9Y5E3 794 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 STRCQ7RTU9 1775 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 CCDC151A5D8V7 595 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 TRIM75PA6NK02 468 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 TBC1D8O95759 1140 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 CCDC175P0C221 793 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 XBP1P17861 261 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 TRIM14Q14142 442 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 ZNF771Q7L3S4 317 aaPredicted RBP10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 SHISA4Q96DD7 197 aa10.52□□□□□ -0.73
PDGFRA-208ENST00000509490 ERICH2A1L162 156 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 PPP1R3GB7ZBB8 358 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 MAP2K7O14733 419 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 RXRAP19793 462 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 GRIN1Q05586 938 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 CTDSPL2Q05D32 466 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 PPARAQ07869 468 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 NPY5RQ15761 445 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 E2F4Q16254 413 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 LCORLQ8N3X6 602 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 WDR24Q96S15 920 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 CARD6Q9BX69 1037 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 CSRNP2Q9H175 543 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 ARMT1Q9H993 441 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 ADGRG1Q9Y653 693 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 URI1O94763 535 aaPredicted RBP10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 ATP2C1P98194 919 aaPredicted RBP10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 PPP2R3AQ06190 1150 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 TOGARAM2Q6ZUX3 1019 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 ESR2Q92731 530 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 PAGE5Q96GU1 130 aa10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 CDC5LQ99459 802 aaKnown RBP10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 COL16A1Q07092 1604 aaPredicted RBP10.51□□□□□ -0.73
PDGFRA-208ENST00000509490 DCAF8L1A6NGE4 600 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 KRT2P35908 639 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 SPAG1Q07617 926 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 CNGA4Q8IV77 575 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 GOLGA1Q92805 767 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 ZBTB1Q9Y2K1 713 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 ORC4O43929 436 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 MFAP3LO75121 409 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 TXLNAP40222 546 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 MUM1L1Q5H9M0 696 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 ISM2Q6H9L7 571 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 SRGAP1Q7Z6B7 1085 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 CEP112Q8N8E3 955 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 RIOK1Q9BRS2 568 aaKnown RBP10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 MYL10Q9BUA6 226 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 TTF2Q9UNY4 1162 aaKnown RBP10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 SLC4A4Q9Y6R1 1079 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 MYH13Q9UKX3 1938 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 UBE2Q2LH0YL09 131 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 GNG11P61952 73 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 DZIP3Q86Y13 1208 aaKnown RBP10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 SEC31BQ9NQW1 1179 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 SAMSN1Q9NSI8 373 aaKnown RBP10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 CALCOCO1Q9P1Z2 691 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 RWDD2AQ9UIY3 292 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 KCNJ14Q9UNX9 436 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 SYNRGQ9UMZ2 1314 aa10.5□□□□□ -0.73
PDGFRA-208ENST00000509490 A0A087X0B3 334 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 TROAPQ12815 778 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 NR5A1Q13285 461 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 CCDC152Q4G0S7 254 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 ARL6IP4Q66PJ3 421 aaKnown RBP10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 TMTC1Q8IUR5 882 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 FUT8Q9BYC5 575 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 SLAIN2Q9P270 581 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 CDC23Q9UJX2 597 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 COL1A1P02452 1464 aaPredicted RBP10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 MYL1P05976 194 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 TRHP20396 242 aaPredicted RBP10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 GPTP24298 496 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 TDO2P48775 406 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 OXER1Q8TDS5 423 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 CCDC85AQ96PX6 553 aaPredicted RBP10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 ZSCAN10Q96SZ4 725 aaPredicted RBP10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 MRPL44Q9H9J2 332 aaKnown RBP10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 NRAPQ86VF7 1730 aa10.49□□□□□ -0.73
PDGFRA-208ENST00000509490 TNKSO95271 1327 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 NTSR2O95665 410 aa10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 CD44P16070 742 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-208ENST00000509490 CDK11BP21127 795 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms