RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 STRBPQ96SI9 672 aaKnown RBP22.37■■□□□ 1.17
UBE3D-207ENST00000509102 EMILIN3Q9NT22 766 aa22.37■■□□□ 1.17
UBE3D-207ENST00000509102 HERVK_113P62684 666 aa22.36■■□□□ 1.17
UBE3D-207ENST00000509102 GIMAP6Q6P9H5 292 aa22.36■■□□□ 1.17
UBE3D-207ENST00000509102 CCAR1Q8IX12 1150 aaKnown RBP22.36■■□□□ 1.17
UBE3D-207ENST00000509102 SLAIN1Q8ND83 568 aa22.36■■□□□ 1.17
UBE3D-207ENST00000509102 SH2D4AQ9H788 454 aa22.36■■□□□ 1.17
UBE3D-207ENST00000509102 USP17L15C9J2P7 530 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 USP17L13C9JLJ4 530 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 USP17L11C9JVI0 530 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 USP17L18D6R9N7 530 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 USP17L22D6RA61 530 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 USP17L17D6RBQ6 530 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 USP17L19D6RCP7 530 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 USP17L20D6RJB6 530 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 APPP05067 770 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 HOXD11P31277 338 aaPredicted RBP22.35■■□□□ 1.17
UBE3D-207ENST00000509102 UBXN2AP68543 259 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 USP17L24Q0WX57 530 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 SEPT2Q15019 361 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 OTUD7AQ8TE49 926 aaPredicted RBP22.35■■□□□ 1.17
UBE3D-207ENST00000509102 DYNLL2Q96FJ2 89 aa22.35■■□□□ 1.17
UBE3D-207ENST00000509102 P2RX7Q99572 595 aaKnown RBP22.35■■□□□ 1.17
UBE3D-207ENST00000509102 GPAA1O43292 621 aa22.34■■□□□ 1.17
UBE3D-207ENST00000509102 MYCP01106 439 aaPredicted RBP22.34■■□□□ 1.17
UBE3D-207ENST00000509102 CTR9Q6PD62 1173 aa22.34■■□□□ 1.17
UBE3D-207ENST00000509102 C16orf86Q6ZW13 317 aa22.34■■□□□ 1.17
UBE3D-207ENST00000509102 SLC44A5Q8NCS7 719 aa22.34■■□□□ 1.17
UBE3D-207ENST00000509102 GPRC5AQ8NFJ5 357 aa22.34■■□□□ 1.17
UBE3D-207ENST00000509102 OSBP2Q969R2 916 aa22.34■■□□□ 1.17
UBE3D-207ENST00000509102 NACAP1Q9BZK3 213 aa22.34■■□□□ 1.17
UBE3D-207ENST00000509102 ARHGEF10LQ9HCE6 1279 aa22.34■■□□□ 1.17
UBE3D-207ENST00000509102 MORF4L1Q9UBU8 362 aa22.34■■□□□ 1.17
UBE3D-207ENST00000509102 MGAMO43451 1857 aa22.34■■□□□ 1.17
UBE3D-207ENST00000509102 POTEFA5A3E0 1075 aa22.33■■□□□ 1.17
UBE3D-207ENST00000509102 TDO2P48775 406 aa22.33■■□□□ 1.17
UBE3D-207ENST00000509102 CDK8P49336 464 aa22.33■■□□□ 1.17
UBE3D-207ENST00000509102 FLT3LGP49771 235 aa22.33■■□□□ 1.17
UBE3D-207ENST00000509102 ACER1Q8TDN7 264 aa22.33■■□□□ 1.17
UBE3D-207ENST00000509102 ZNF287Q9HBT7 754 aa22.33■■□□□ 1.17
UBE3D-207ENST00000509102 BAZ2AQ9UIF9 1905 aaKnown RBP22.33■■□□□ 1.16
UBE3D-207ENST00000509102 CENPFP49454 3210 aa22.33■■□□□ 1.16
UBE3D-207ENST00000509102 CYP2D7A0A087X1C5 515 aa22.32■■□□□ 1.16
UBE3D-207ENST00000509102 VCAM1P19320 739 aa22.32■■□□□ 1.16
UBE3D-207ENST00000509102 EVX2Q03828 476 aa22.32■■□□□ 1.16
UBE3D-207ENST00000509102 ICA1Q05084 483 aa22.32■■□□□ 1.16
UBE3D-207ENST00000509102 IRF5Q13568 498 aa22.32■■□□□ 1.16
UBE3D-207ENST00000509102 CWC22Q9HCG8 908 aaKnown RBP22.32■■□□□ 1.16
UBE3D-207ENST00000509102 GABRQQ9UN88 632 aa22.32■■□□□ 1.16
UBE3D-207ENST00000509102 MYH8P13535 1937 aa22.31■■□□□ 1.16
UBE3D-207ENST00000509102 ADCY3O60266 1144 aa22.31■■□□□ 1.16
UBE3D-207ENST00000509102 GUCY1A2P33402 732 aa22.31■■□□□ 1.16
UBE3D-207ENST00000509102 SBK1Q52WX2 424 aa22.31■■□□□ 1.16
UBE3D-207ENST00000509102 PXYLP1Q8TE99 480 aa22.31■■□□□ 1.16
UBE3D-207ENST00000509102 EVI5LQ96CN4 794 aa22.31■■□□□ 1.16
UBE3D-207ENST00000509102 PAGR1Q9BTK6 254 aa22.31■■□□□ 1.16
UBE3D-207ENST00000509102 MKNK2Q9HBH9 465 aa22.31■■□□□ 1.16
UBE3D-207ENST00000509102 RBBP6Q7Z6E9 1792 aaKnown RBP22.3■■□□□ 1.16
UBE3D-207ENST00000509102 GSG1L2A8MUP6 293 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 MINDY4BA8MYZ0 360 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 AKR1B1P15121 316 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 MAPK4P31152 587 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 PDE1AP54750 535 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 CCNA1P78396 465 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 CATSPERGQ6ZRH7 1159 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 EXOC6Q8TAG9 804 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 NKX2-3Q8TAU0 364 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 LPAR1Q92633 364 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 RPAP3Q9H6T3 665 aaPredicted RBP22.3■■□□□ 1.16
UBE3D-207ENST00000509102 RNF216Q9NWF9 866 aaPredicted RBP22.3■■□□□ 1.16
UBE3D-207ENST00000509102 STAP2Q9UGK3 403 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 SUPT16HQ9Y5B9 1047 aaKnown RBP22.3■■□□□ 1.16
UBE3D-207ENST00000509102 SALL3Q9BXA9 1300 aa22.3■■□□□ 1.16
UBE3D-207ENST00000509102 PATL2C9JE40 543 aaKnown RBP22.29■■□□□ 1.16
UBE3D-207ENST00000509102 M0R2C6 588 aa22.29■■□□□ 1.16
UBE3D-207ENST00000509102 ERVK-9P63128 1117 aa22.29■■□□□ 1.16
UBE3D-207ENST00000509102 ERVK-24P63145 666 aa22.29■■□□□ 1.16
UBE3D-207ENST00000509102 LNPKQ9C0E8 428 aa22.29■■□□□ 1.16
UBE3D-207ENST00000509102 KANSL2Q9H9L4 492 aa22.29■■□□□ 1.16
UBE3D-207ENST00000509102 RABGAP1Q9Y3P9 1069 aa22.29■■□□□ 1.16
UBE3D-207ENST00000509102 KIAA0100Q14667 2235 aaKnown RBP22.29■■□□□ 1.16
UBE3D-207ENST00000509102 SLC3A2P08195 630 aaKnown RBP22.28■■□□□ 1.16
UBE3D-207ENST00000509102 EN2P19622 333 aaPredicted RBP22.28■■□□□ 1.16
UBE3D-207ENST00000509102 ATP2B2Q01814 1243 aa22.28■■□□□ 1.16
UBE3D-207ENST00000509102 B4GALNT3Q6L9W6 998 aa22.28■■□□□ 1.16
UBE3D-207ENST00000509102 SMC5Q8IY18 1101 aa22.28■■□□□ 1.16
UBE3D-207ENST00000509102 SOCS4Q8WXH5 440 aa22.28■■□□□ 1.16
UBE3D-207ENST00000509102 TANGO6Q9C0B7 1094 aa22.28■■□□□ 1.16
UBE3D-207ENST00000509102 RBPJLQ9UBG7 517 aa22.28■■□□□ 1.16
UBE3D-207ENST00000509102 ZMYM1Q5SVZ6 1142 aa22.27■■□□□ 1.16
UBE3D-207ENST00000509102 TICAM2Q86XR7 235 aa22.27■■□□□ 1.16
UBE3D-207ENST00000509102 RNF208Q9H0X6 261 aa22.27■■□□□ 1.16
UBE3D-207ENST00000509102 NAPBQ9H115 298 aa22.27■■□□□ 1.16
UBE3D-207ENST00000509102 HOXC10Q9NYD6 342 aa22.27■■□□□ 1.16
UBE3D-207ENST00000509102 A0A1W2PRG0 241 aa22.26■■□□□ 1.15
UBE3D-207ENST00000509102 CCL5P13501 91 aa22.26■■□□□ 1.15
UBE3D-207ENST00000509102 ELNP15502 786 aa22.26■■□□□ 1.15
UBE3D-207ENST00000509102 MTFR1Q15390 333 aa22.26■■□□□ 1.15
UBE3D-207ENST00000509102 IFNL3Q8IZI9 196 aa22.26■■□□□ 1.15
UBE3D-207ENST00000509102 NUDT12Q9BQG2 462 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms