RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 RCSD1Q6JBY9 416 aa15.35■□□□□ 0.05
SPSB4-204ENST00000508828 TMTC3Q6ZXV5 915 aa15.35■□□□□ 0.05
SPSB4-204ENST00000508828 USP48Q86UV5 1035 aa15.35■□□□□ 0.05
SPSB4-204ENST00000508828 CRACR2BQ8N4Y2 399 aaPredicted RBP15.35■□□□□ 0.05
SPSB4-204ENST00000508828 PNMA1Q8ND90 353 aa15.35■□□□□ 0.05
SPSB4-204ENST00000508828 ZNF396Q96N95 335 aaPredicted RBP15.35■□□□□ 0.05
SPSB4-204ENST00000508828 TRIM34Q9BYJ4 488 aa15.35■□□□□ 0.05
SPSB4-204ENST00000508828 SCAND2PQ9GZW5 306 aaPredicted RBP15.35■□□□□ 0.05
SPSB4-204ENST00000508828 TDRD3Q9H7E2 651 aaKnown RBP15.35■□□□□ 0.05
SPSB4-204ENST00000508828 GDPD2Q9HCC8 539 aa15.35■□□□□ 0.05
SPSB4-204ENST00000508828 IL17RBQ9NRM6 502 aa15.35■□□□□ 0.05
SPSB4-204ENST00000508828 PCDHAC2Q9Y5I4 1007 aa15.35■□□□□ 0.05
SPSB4-204ENST00000508828 MYH6P13533 1939 aa15.35■□□□□ 0.05
SPSB4-204ENST00000508828 SPDYE2BA6NHP3 402 aa15.34■□□□□ 0.05
SPSB4-204ENST00000508828 SPDYE6P0CI01 402 aa15.34■□□□□ 0.05
SPSB4-204ENST00000508828 GNAQP50148 359 aa15.34■□□□□ 0.05
SPSB4-204ENST00000508828 CXCL9Q07325 125 aa15.34■□□□□ 0.05
SPSB4-204ENST00000508828 GSE1Q14687 1217 aa15.34■□□□□ 0.05
SPSB4-204ENST00000508828 BRAPQ7Z569 592 aa15.34■□□□□ 0.05
SPSB4-204ENST00000508828 NBPF11Q86T75 865 aa15.34■□□□□ 0.05
SPSB4-204ENST00000508828 ZSCAN29Q8IWY8 852 aaPredicted RBP15.34■□□□□ 0.05
SPSB4-204ENST00000508828 RBM27Q9P2N5 1060 aaKnown RBP15.34■□□□□ 0.05
SPSB4-204ENST00000508828 FAM198AQ9UFP1 575 aa15.34■□□□□ 0.05
SPSB4-204ENST00000508828 CFAP45Q9UL16 551 aa15.34■□□□□ 0.05
SPSB4-204ENST00000508828 STX8Q9UNK0 236 aa15.34■□□□□ 0.05
SPSB4-204ENST00000508828 SIPA1L1O43166 1804 aa15.33■□□□□ 0.05
SPSB4-204ENST00000508828 TOP1P11387 765 aaKnown RBP15.33■□□□□ 0.04
SPSB4-204ENST00000508828 XBP1P17861 261 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 CACNB3P54284 484 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 UBE2HP62256 183 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 TCP10Q12799 353 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 GRM4Q14833 912 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 KRT40Q6A162 431 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 MTMR14Q8NCE2 650 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 NLGN2Q8NFZ4 835 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 CCDC17Q96LX7 622 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 TMEM47Q9BQJ4 181 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 PI4KBQ9UBF8 816 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
SPSB4-204ENST00000508828 ELP1O95163 1332 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 CNTNAP5Q8WYK1 1306 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 ATRNL1Q5VV63 1379 aa15.33■□□□□ 0.04
SPSB4-204ENST00000508828 PRPF3O43395 683 aaKnown RBP15.32■□□□□ 0.04
SPSB4-204ENST00000508828 PLEKHA8P1O95397 391 aa15.32■□□□□ 0.04
SPSB4-204ENST00000508828 RPS12P25398 132 aaKnown RBP15.32■□□□□ 0.04
SPSB4-204ENST00000508828 EIF6P56537 245 aaKnown RBP15.32■□□□□ 0.04
SPSB4-204ENST00000508828 KIF23Q02241 960 aaPredicted RBP15.32■□□□□ 0.04
SPSB4-204ENST00000508828 RASSF7Q02833 373 aa15.32■□□□□ 0.04
SPSB4-204ENST00000508828 GNL2Q13823 731 aaKnown RBP15.32■□□□□ 0.04
SPSB4-204ENST00000508828 SAFBQ15424 915 aaKnown RBP eCLIP15.32■□□□□ 0.04
SPSB4-204ENST00000508828 OTUD7BQ6GQQ9 843 aa15.32■□□□□ 0.04
SPSB4-204ENST00000508828 FAM173BQ6P4H8 233 aa15.32■□□□□ 0.04
SPSB4-204ENST00000508828 FOXP4Q8IVH2 680 aaPredicted RBP15.32■□□□□ 0.04
SPSB4-204ENST00000508828 SYAP1Q96A49 352 aaPredicted RBP15.32■□□□□ 0.04
SPSB4-204ENST00000508828 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
SPSB4-204ENST00000508828 SPATA32Q96LK8 384 aa15.32■□□□□ 0.04
SPSB4-204ENST00000508828 AIFM3Q96NN9 605 aa15.32■□□□□ 0.04
SPSB4-204ENST00000508828 GREB1LQ9C091 1923 aaPredicted RBP15.31■□□□□ 0.04
SPSB4-204ENST00000508828 IGKV6D-41A0A0C4DH26 115 aa15.31■□□□□ 0.04
SPSB4-204ENST00000508828 MYO1BO43795 1136 aa15.31■□□□□ 0.04
SPSB4-204ENST00000508828 AKR1B1P15121 316 aa15.31■□□□□ 0.04
SPSB4-204ENST00000508828 SHMT1P34896 483 aa15.31■□□□□ 0.04
SPSB4-204ENST00000508828 NOVP48745 357 aa15.31■□□□□ 0.04
SPSB4-204ENST00000508828 FUT2Q10981 343 aa15.31■□□□□ 0.04
SPSB4-204ENST00000508828 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
SPSB4-204ENST00000508828 FKBP1CQ5VVH2 108 aa15.31■□□□□ 0.04
SPSB4-204ENST00000508828 GPT2Q8TD30 523 aa15.31■□□□□ 0.04
SPSB4-204ENST00000508828 CEP95Q96GE4 821 aa15.31■□□□□ 0.04
SPSB4-204ENST00000508828 LZTS2Q9BRK4 669 aa15.31■□□□□ 0.04
SPSB4-204ENST00000508828 GZF1Q9H116 711 aaPredicted RBP15.31■□□□□ 0.04
SPSB4-204ENST00000508828 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
SPSB4-204ENST00000508828 DDTLA6NHG4 134 aaPredicted RBP15.3■□□□□ 0.04
SPSB4-204ENST00000508828 GADD45BO75293 160 aaPredicted RBP15.3■□□□□ 0.04
SPSB4-204ENST00000508828 GPR162Q16538 588 aa15.3■□□□□ 0.04
SPSB4-204ENST00000508828 CAVIN1Q6NZI2 390 aaKnown RBP15.3■□□□□ 0.04
SPSB4-204ENST00000508828 ZFPM1Q8IX07 1006 aa15.3■□□□□ 0.04
SPSB4-204ENST00000508828 CMTR1Q8N1G2 835 aaKnown RBP15.3■□□□□ 0.04
SPSB4-204ENST00000508828 CCDC82Q8N4S0 544 aa15.3■□□□□ 0.04
SPSB4-204ENST00000508828 MPHOSPH10O00566 681 aaKnown RBP15.29■□□□□ 0.04
SPSB4-204ENST00000508828 TTLL1O95922 423 aa15.29■□□□□ 0.04
SPSB4-204ENST00000508828 GUCY1A2P33402 732 aa15.29■□□□□ 0.04
SPSB4-204ENST00000508828 MYSM1Q5VVJ2 828 aa15.29■□□□□ 0.04
SPSB4-204ENST00000508828 SH3BP5LQ7L8J4 393 aa15.29■□□□□ 0.04
SPSB4-204ENST00000508828 SRBD1Q8N5C6 995 aaKnown RBP15.29■□□□□ 0.04
SPSB4-204ENST00000508828 LEO1Q8WVC0 666 aaPredicted RBP15.29■□□□□ 0.04
SPSB4-204ENST00000508828 FAM151AQ8WW52 585 aa15.29■□□□□ 0.04
SPSB4-204ENST00000508828 GJB4Q9NTQ9 266 aa15.29■□□□□ 0.04
SPSB4-204ENST00000508828 MTMR4Q9NYA4 1195 aa15.29■□□□□ 0.04
SPSB4-204ENST00000508828 TFIP11Q9UBB9 837 aaKnown RBP15.29■□□□□ 0.04
SPSB4-204ENST00000508828 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
SPSB4-204ENST00000508828 GOLGA6L4A6NEF3 574 aa15.28■□□□□ 0.04
SPSB4-204ENST00000508828 TCP10L2B9ZVM9 353 aa15.28■□□□□ 0.04
SPSB4-204ENST00000508828 MMP1P03956 469 aa15.28■□□□□ 0.04
SPSB4-204ENST00000508828 PARP1P09874 1014 aaKnown RBP15.28■□□□□ 0.04
SPSB4-204ENST00000508828 CERKLQ49MI3 558 aaPredicted RBP15.28■□□□□ 0.04
SPSB4-204ENST00000508828 METTL16Q86W50 562 aaKnown RBP15.28■□□□□ 0.04
SPSB4-204ENST00000508828 ZBED3Q96IU2 234 aaPredicted RBP15.28■□□□□ 0.04
SPSB4-204ENST00000508828 USP28Q96RU2 1077 aa15.28■□□□□ 0.04
SPSB4-204ENST00000508828 CSRNP1Q96S65 589 aa15.28■□□□□ 0.04
SPSB4-204ENST00000508828 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms