RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 GPATCH3Q96I76 525 aa5.94□□□□□ -1.46
SMARCA5-202ENST00000508573 NSUN3Q9H649 340 aaKnown RBP5.94□□□□□ -1.46
SMARCA5-202ENST00000508573 FBRSQ9HAH7 460 aa5.94□□□□□ -1.46
SMARCA5-202ENST00000508573 KCNK12Q9HB15 430 aa5.94□□□□□ -1.46
SMARCA5-202ENST00000508573 C19orf73Q9NVV2 129 aa5.94□□□□□ -1.46
SMARCA5-202ENST00000508573 ZSWIM5Q9P217 1185 aa5.94□□□□□ -1.46
SMARCA5-202ENST00000508573 ANKRD33BA6NCL7 494 aa5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 RBAK-RBAKDNI3L0D1 243 aa5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 ZSCAN22P10073 491 aaPredicted RBP5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 SLBPQ14493 270 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 C1QL4Q86Z23 238 aa5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 MFSD4AQ8N468 514 aa5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 MFSD2AQ8NA29 543 aa5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 FBXO15Q8NCQ5 510 aaPredicted RBP5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 SRCIN1Q9C0H9 1055 aa5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 WNT10AQ9GZT5 417 aa5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 PPM1HQ9ULR3 514 aa5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMARCA5-202ENST00000508573 A0A0U1RQG5 324 aaPredicted RBP5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 CELA3AP09093 270 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 TMEM253P0C7T8 217 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 ETF1P62495 437 aaKnown RBP5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 NKG7Q16617 165 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 ZNF326Q5BKZ1 582 aaKnown RBP5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 PCNX4Q63HM2 1172 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 SCARA3Q6AZY7 606 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 LCNL1Q6ZST4 164 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 TTC6Q86TZ1 520 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 SIAH1Q8IUQ4 282 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 XAGE3Q8WTP9 111 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 PLPPR2Q96GM1 343 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 SETDB2Q96T68 719 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 KRTAP4-2Q9BYR5 136 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 LNPKQ9C0E8 428 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 WWC3Q9ULE0 1092 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 ST14Q9Y5Y6 855 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 CAPN6Q9Y6Q1 641 aa5.92□□□□□ -1.46
SMARCA5-202ENST00000508573 KRTAP9-7A8MTY7 169 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 GIPC1O14908 333 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 KRT1P04264 644 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 GORABQ5T7V8 394 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 LETMD1Q6P1Q0 360 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 LILRA6Q6PI73 481 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 CDH24Q86UP0 819 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 ABHD4Q8TB40 342 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 CCDC120Q96HB5 630 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 BCL11AQ9H165 835 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 SLAMF8Q9P0V8 285 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 SNCAIPQ9Y6H5 919 aa5.91□□□□□ -1.46
SMARCA5-202ENST00000508573 TLDC2A0PJX2 215 aa5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 NPIPB6E9PJ23 425 aa5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 MAP4K4O95819 1239 aaPredicted RBP5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 ERCC5P28715 1186 aaPredicted RBP5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 CDK8P49336 464 aa5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 EGFLAMQ63HQ2 1017 aa5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 FBXO33Q7Z6M2 555 aa5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 HID1Q8IV36 788 aa5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 KCNN1Q92952 543 aa5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 CCDC136Q96JN2 1154 aa5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 ALPK1Q96QP1 1244 aa5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 DNAJC2Q99543 621 aaKnown RBP5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 DCP1AQ9NPI6 582 aaPredicted RBP5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 KLHL42Q9P2K6 505 aa5.9□□□□□ -1.46
SMARCA5-202ENST00000508573 RAC2P15153 192 aa5.89□□□□□ -1.47
SMARCA5-202ENST00000508573 CYP7A1P22680 504 aa5.89□□□□□ -1.47
SMARCA5-202ENST00000508573 ALG1LQ6GMV1 187 aa5.89□□□□□ -1.47
SMARCA5-202ENST00000508573 C22orf34Q6ZV56 151 aa5.89□□□□□ -1.47
SMARCA5-202ENST00000508573 THAP5Q7Z6K1 395 aa5.89□□□□□ -1.47
SMARCA5-202ENST00000508573 FBF1Q8TES7 1133 aa5.89□□□□□ -1.47
SMARCA5-202ENST00000508573 TMA7Q9Y2S6 64 aaKnown RBP5.89□□□□□ -1.47
SMARCA5-202ENST00000508573 DNAJC25-GNG10A0A024R161 153 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 PARNO95453 639 aaKnown RBP5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 GRK4P32298 578 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 CAP2P40123 477 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 HK2P52789 917 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 ERVFC1P60507 584 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 TNK2Q07912 1038 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 TSNAXIP1Q2TAA8 658 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 HSP90AB4PQ58FF6 505 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 RALGPS1Q5JS13 557 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 WIPI1Q5MNZ9 446 aaPredicted RBP5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 PRAMEF13Q5VWM6 474 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 ZNF746Q6NUN9 644 aaPredicted RBP5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 ATG14Q6ZNE5 492 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 METTL14Q9HCE5 456 aaKnown RBP5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 SPG7Q9UQ90 795 aa5.88□□□□□ -1.47
SMARCA5-202ENST00000508573 WASH4PA8MWX3 477 aa5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 CST3P01034 146 aaPredicted RBP5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 USP17L7P0C7H9 530 aa5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 CCDC181Q5TID7 509 aa5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 C9orf131Q5VYM1 1079 aa5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 TTBK2Q6IQ55 1244 aa5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 SV2BQ7L1I2 683 aa5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 ZSCAN29Q8IWY8 852 aaPredicted RBP5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 ANKRD24Q8TF21 1146 aa5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 MYLIPQ8WY64 445 aa5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 EPB41L4BQ9H329 900 aa5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 C12orf49Q9H741 205 aa5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 FAM8A1Q9UBU6 413 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms