RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 A0A1W2PRG0 241 aa21.32■■□□□ 1
SFXN1-207ENST00000507395 CCL5P13501 91 aa21.32■■□□□ 1
SFXN1-207ENST00000507395 SIAH1Q8IUQ4 282 aa21.32■■□□□ 1
SFXN1-207ENST00000507395 OTUD7AQ8TE49 926 aaPredicted RBP21.32■■□□□ 1
SFXN1-207ENST00000507395 COA7Q96BR5 231 aa21.32■■□□□ 1
SFXN1-207ENST00000507395 CRBNQ96SW2 442 aa21.32■■□□□ 1
SFXN1-207ENST00000507395 SALL3Q9BXA9 1300 aa21.31■■□□□ 1
SFXN1-207ENST00000507395 GJB1P08034 283 aa21.31■■□□□ 1
SFXN1-207ENST00000507395 GJA8P48165 433 aa21.31■■□□□ 1
SFXN1-207ENST00000507395 ZYXQ15942 572 aaKnown RBP21.31■■□□□ 1
SFXN1-207ENST00000507395 ZSCAN25Q6NSZ9 544 aa21.31■■□□□ 1
SFXN1-207ENST00000507395 CATSPERGQ6ZRH7 1159 aa21.31■■□□□ 1
SFXN1-207ENST00000507395 UBE2Q1Q7Z7E8 422 aa21.31■■□□□ 1
SFXN1-207ENST00000507395 PI4K2BQ8TCG2 481 aa21.31■■□□□ 1
SFXN1-207ENST00000507395 STRBPQ96SI9 672 aaKnown RBP21.31■■□□□ 1
SFXN1-207ENST00000507395 CABP5Q9NP86 173 aa21.31■■□□□ 1
SFXN1-207ENST00000507395 SWAP70Q9UH65 585 aa21.31■■□□□ 1
SFXN1-207ENST00000507395 USP17L12C9JPN9 530 aa21.3■■□□□ 1
SFXN1-207ENST00000507395 USP17L21D6R901 530 aa21.3■■□□□ 1
SFXN1-207ENST00000507395 CNMDO75829 334 aa21.3■■□□□ 1
SFXN1-207ENST00000507395 VCAM1P19320 739 aa21.3■■□□□ 1
SFXN1-207ENST00000507395 USP14P54578 494 aa21.3■■□□□ 1
SFXN1-207ENST00000507395 CTR9Q6PD62 1173 aa21.3■■□□□ 1
SFXN1-207ENST00000507395 OSBP2Q969R2 916 aa21.3■■□□□ 1
SFXN1-207ENST00000507395 UNC93B1Q9H1C4 597 aa21.3■■□□□ 1
SFXN1-207ENST00000507395 USP17L15C9J2P7 530 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 USP17L13C9JLJ4 530 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 USP17L11C9JVI0 530 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 USP17L18D6R9N7 530 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 USP17L22D6RA61 530 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 USP17L17D6RBQ6 530 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 USP17L19D6RCP7 530 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 USP17L20D6RJB6 530 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 INHAP05111 366 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 UBXN2AP68543 259 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 USP17L24Q0WX57 530 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 C16orf86Q6ZW13 317 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 GPRC5AQ8NFJ5 357 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 FEZ1Q99689 392 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 SLC4A4Q9Y6R1 1079 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 MYH8P13535 1937 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 TTC41PQ6P2S7 1318 aa21.29■■□□□ 1
SFXN1-207ENST00000507395 RLFQ13129 1914 aa21.28■■□□□ 1
SFXN1-207ENST00000507395 AKR1B1P15121 316 aa21.28■■□□□ 1
SFXN1-207ENST00000507395 CDK8P49336 464 aa21.28■■□□□ 1
SFXN1-207ENST00000507395 ERVK-9P63128 1117 aa21.28■■□□□ 1
SFXN1-207ENST00000507395 ERVK-24P63145 666 aa21.28■■□□□ 1
SFXN1-207ENST00000507395 KIAA1755Q5JYT7 1200 aa21.28■■□□□ 1
SFXN1-207ENST00000507395 LBX2Q6XYB7 198 aa21.28■■□□□ 1
SFXN1-207ENST00000507395 TMEM179Q6ZVK1 233 aa21.28■■□□□ 1
SFXN1-207ENST00000507395 USP6NLQ92738 828 aa21.28■■□□□ 1
SFXN1-207ENST00000507395 RNF208Q9H0X6 261 aa21.28■■□□□ 1
SFXN1-207ENST00000507395 PORCNQ9H237 461 aa21.28■■□□□ 1
SFXN1-207ENST00000507395 BIN2Q9UBW5 565 aaPredicted RBP21.28■■□□□ 1
SFXN1-207ENST00000507395 GSG1L2A8MUP6 293 aa21.27■■□□□ 1
SFXN1-207ENST00000507395 RNF113AO15541 343 aaKnown RBP21.27■■□□□ 1
SFXN1-207ENST00000507395 GTF3C2Q8WUA4 911 aaPredicted RBP21.27■■□□□ 1
SFXN1-207ENST00000507395 APPBP2Q92624 585 aa21.27■■□□□ 1
SFXN1-207ENST00000507395 GPATCH3Q96I76 525 aa21.27■■□□□ 1
SFXN1-207ENST00000507395 PAK6Q9NQU5 681 aaPredicted RBP21.27■■□□□ 1
SFXN1-207ENST00000507395 SBK1Q52WX2 424 aa21.26■□□□□ 0.99
SFXN1-207ENST00000507395 CLEC10AQ8IUN9 316 aa21.26■□□□□ 0.99
SFXN1-207ENST00000507395 NKX2-3Q8TAU0 364 aa21.26■□□□□ 0.99
SFXN1-207ENST00000507395 RABGAP1Q9Y3P9 1069 aa21.26■□□□□ 0.99
SFXN1-207ENST00000507395 GREB1LQ9C091 1923 aaPredicted RBP21.25■□□□□ 0.99
SFXN1-207ENST00000507395 MPHOSPH10O00566 681 aaKnown RBP21.25■□□□□ 0.99
SFXN1-207ENST00000507395 SGPL1O95470 568 aa21.25■□□□□ 0.99
SFXN1-207ENST00000507395 TRIM32Q13049 653 aa21.25■□□□□ 0.99
SFXN1-207ENST00000507395 HDAC1Q13547 482 aaPredicted RBP21.25■□□□□ 0.99
SFXN1-207ENST00000507395 GIMAP6Q6P9H5 292 aa21.25■□□□□ 0.99
SFXN1-207ENST00000507395 U2AF1L4Q8WU68 220 aaKnown RBP21.25■□□□□ 0.99
SFXN1-207ENST00000507395 YTHDC1Q96MU7 727 aaKnown RBP21.25■□□□□ 0.99
SFXN1-207ENST00000507395 PAGR1Q9BTK6 254 aa21.25■□□□□ 0.99
SFXN1-207ENST00000507395 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.25■□□□□ 0.99
SFXN1-207ENST00000507395 RPAP3Q9H6T3 665 aaPredicted RBP21.25■□□□□ 0.99
SFXN1-207ENST00000507395 EPB41L4AQ9HCS5 686 aaPredicted RBP21.25■□□□□ 0.99
SFXN1-207ENST00000507395 BTBD7Q9P203 1132 aa21.25■□□□□ 0.99
SFXN1-207ENST00000507395 A0A0G2JMZ2 1700 aa21.24■□□□□ 0.99
SFXN1-207ENST00000507395 SPDYE16A6NNV3 312 aaPredicted RBP21.24■□□□□ 0.99
SFXN1-207ENST00000507395 M0R2C6 588 aa21.24■□□□□ 0.99
SFXN1-207ENST00000507395 ZFYP08048 801 aaPredicted RBP21.24■□□□□ 0.99
SFXN1-207ENST00000507395 MAPK4P31152 587 aa21.24■□□□□ 0.99
SFXN1-207ENST00000507395 MORN1Q5T089 497 aa21.24■□□□□ 0.99
SFXN1-207ENST00000507395 TRIB2Q92519 343 aa21.24■□□□□ 0.99
SFXN1-207ENST00000507395 CCDC17Q96LX7 622 aa21.24■□□□□ 0.99
SFXN1-207ENST00000507395 TMX2Q9Y320 296 aa21.24■□□□□ 0.99
SFXN1-207ENST00000507395 GPAA1O43292 621 aa21.23■□□□□ 0.99
SFXN1-207ENST00000507395 GLRX3O76003 335 aaKnown RBP21.23■□□□□ 0.99
SFXN1-207ENST00000507395 XRCC5P13010 732 aaKnown RBP21.23■□□□□ 0.99
SFXN1-207ENST00000507395 GPR142Q7Z601 462 aa21.23■□□□□ 0.99
SFXN1-207ENST00000507395 CRISPLD2Q9H0B8 497 aa21.23■□□□□ 0.99
SFXN1-207ENST00000507395 ARPP21Q9UBL0 812 aaPredicted RBP21.23■□□□□ 0.99
SFXN1-207ENST00000507395 ROBO3Q96MS0 1386 aa21.23■□□□□ 0.99
SFXN1-207ENST00000507395 PARP14Q460N5 1801 aa21.22■□□□□ 0.99
SFXN1-207ENST00000507395 HMGCRP04035 888 aa21.22■□□□□ 0.99
SFXN1-207ENST00000507395 MX1P20591 662 aa21.22■□□□□ 0.99
SFXN1-207ENST00000507395 MAP3K21Q5TCX8 1036 aa21.22■□□□□ 0.99
SFXN1-207ENST00000507395 SEC62Q99442 399 aaKnown RBP21.22■□□□□ 0.99
SFXN1-207ENST00000507395 NUDT12Q9BQG2 462 aa21.22■□□□□ 0.99
SFXN1-207ENST00000507395 ERC2O15083 957 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms