RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 LBHD1Q9BQE6 289 aaPredicted RBP11.09□□□□□ -0.63
COPS4-205ENST00000507376 PDLIM7Q9NR12 457 aa11.09□□□□□ -0.63
COPS4-205ENST00000507376 BMP2KQ9NSY1 1161 aaPredicted RBP11.09□□□□□ -0.63
COPS4-205ENST00000507376 DENND2AQ9ULE3 1009 aa11.09□□□□□ -0.63
COPS4-205ENST00000507376 GBF1Q92538 1859 aa11.08□□□□□ -0.64
COPS4-205ENST00000507376 ZNF236Q9UL36 1845 aa11.08□□□□□ -0.64
COPS4-205ENST00000507376 USP17L5A8MUK1 530 aa11.08□□□□□ -0.64
COPS4-205ENST00000507376 XRCC5P13010 732 aaKnown RBP11.08□□□□□ -0.64
COPS4-205ENST00000507376 GRIN2CQ14957 1233 aa11.08□□□□□ -0.64
COPS4-205ENST00000507376 WDR63Q8IWG1 891 aa11.08□□□□□ -0.64
COPS4-205ENST00000507376 GPRC5AQ8NFJ5 357 aa11.08□□□□□ -0.64
COPS4-205ENST00000507376 EMILIN3Q9NT22 766 aa11.08□□□□□ -0.64
COPS4-205ENST00000507376 MYH1P12882 1939 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 TCF20Q9UGU0 1960 aaKnown RBP11.07□□□□□ -0.64
COPS4-205ENST00000507376 PLXNA1Q9UIW2 1896 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 TBC1D12O60347 775 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 CNGA1P29973 690 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 RGS2P41220 211 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 PDE3AQ14432 1141 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 WDR78Q5VTH9 848 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 PLEKHH3Q7Z736 793 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 MAPKAPK5Q8IW41 473 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 SSH1Q8WYL5 1049 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 FERMT2Q96AC1 680 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 LENG1Q96BZ8 264 aaPredicted RBP11.07□□□□□ -0.64
COPS4-205ENST00000507376 NECAB3Q96P71 396 aaPredicted RBP11.07□□□□□ -0.64
COPS4-205ENST00000507376 HMG20BQ9P0W2 317 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 BTBD7Q9P203 1132 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 DDX20Q9UHI6 824 aaKnown RBP11.07□□□□□ -0.64
COPS4-205ENST00000507376 MYO9BQ13459 2157 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 REV3LO60673 3130 aa11.07□□□□□ -0.64
COPS4-205ENST00000507376 NCOR1O75376 2440 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 CYBAP13498 195 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 BACE1P56817 501 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 MAP2K5Q13163 448 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 TEX11Q8IYF3 940 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 KCNV2Q8TDN2 545 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 PPM1EQ8WY54 764 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 NSUN4Q96CB9 384 aaKnown RBP11.06□□□□□ -0.64
COPS4-205ENST00000507376 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
COPS4-205ENST00000507376 CEP126Q9P2H0 1117 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 SAP30BPQ9UHR5 308 aaKnown RBP11.06□□□□□ -0.64
COPS4-205ENST00000507376 ZBTB21Q9ULJ3 1066 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 PARP14Q460N5 1801 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 SMCHD1A6NHR9 2005 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 CHD9Q3L8U1 2897 aa11.06□□□□□ -0.64
COPS4-205ENST00000507376 TMEM265A0A087WTH1 108 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 A0A1B0GUL7 405 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 RBAK-RBAKDNI3L0D1 243 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 SEMA3EO15041 775 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 CIAO1O76071 339 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 CAPN2P17655 700 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 MAPK4P31152 587 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 HOXA7P31268 230 aaPredicted RBP11.05□□□□□ -0.64
COPS4-205ENST00000507376 TFCP2Q12800 502 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 PABPC4Q13310 644 aaKnown RBP eCLIP11.05□□□□□ -0.64
COPS4-205ENST00000507376 FAM47AQ5JRC9 791 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 PRAMEF19Q5SWL8 479 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 XAGE2Q96GT9 111 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 WDR18Q9BV38 432 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 MRS2Q9HD23 443 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 GNL3LQ9NVN8 582 aaKnown RBP11.05□□□□□ -0.64
COPS4-205ENST00000507376 FLT1P17948 1338 aa11.05□□□□□ -0.64
COPS4-205ENST00000507376 COL11A1P12107 1806 aaPredicted RBP11.05□□□□□ -0.64
COPS4-205ENST00000507376 TNFRSF10AO00220 468 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 DNM1LO00429 736 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 IGHA2P01877 340 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 MCAMP43121 646 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 ACER1Q8TDN7 264 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 MEIS3Q99687 375 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 SNRKQ9NRH2 765 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 AATFQ9NY61 560 aaKnown RBP eCLIP11.04□□□□□ -0.64
COPS4-205ENST00000507376 TMOD4Q9NZQ9 345 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 PALD1Q9ULE6 856 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 BDP1A6H8Y1 2624 aa11.04□□□□□ -0.64
COPS4-205ENST00000507376 GRXCR1A8MXD5 290 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 GH2P01242 217 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 TIE1P35590 1138 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 PBX2P40425 430 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 ADCYAP1R1P41586 468 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 SMAD3P84022 425 aaKnown RBP11.03□□□□□ -0.64
COPS4-205ENST00000507376 SNX17Q15036 470 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 SLC39A5Q6ZMH5 540 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 TGFBRAP1Q8WUH2 860 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 LPAR1Q92633 364 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 EDC3Q96F86 508 aaKnown RBP11.03□□□□□ -0.64
COPS4-205ENST00000507376 RNPC3Q96LT9 517 aaKnown RBP11.03□□□□□ -0.64
COPS4-205ENST00000507376 AS3MTQ9HBK9 375 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 PDS5AQ29RF7 1337 aaKnown RBP11.03□□□□□ -0.64
COPS4-205ENST00000507376 ZNF521Q96K83 1311 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 CHD7Q9P2D1 2997 aa11.03□□□□□ -0.64
COPS4-205ENST00000507376 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.65
COPS4-205ENST00000507376 USP17L10C9JJH3 530 aa11.02□□□□□ -0.65
COPS4-205ENST00000507376 PTPREP23469 700 aa11.02□□□□□ -0.65
COPS4-205ENST00000507376 DNAJB2P25686 324 aa11.02□□□□□ -0.65
COPS4-205ENST00000507376 PLA2G5P39877 138 aa11.02□□□□□ -0.65
COPS4-205ENST00000507376 IL15P40933 162 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms