RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 C12orf42Q96LP6 360 aa14□□□□□ -0.17
HMGCS1-204ENST00000507293 NUDT12Q9BQG2 462 aa14□□□□□ -0.17
HMGCS1-204ENST00000507293 CRNKL1Q9BZJ0 848 aaKnown RBP14□□□□□ -0.17
HMGCS1-204ENST00000507293 RPTORQ8N122 1335 aa13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 MAPK4P31152 587 aa13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 EVX2Q03828 476 aa13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 PDE3AQ14432 1141 aa13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 Q3C1V9 767 aa13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 CCAR1Q8IX12 1150 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 ACER1Q8TDN7 264 aa13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 KIAA1683Q9H0B3 1180 aa13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 PORCNQ9H237 461 aa13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 HMX1Q9NP08 348 aaPredicted RBP13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 CABP5Q9NP86 173 aa13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 NR2E3Q9Y5X4 410 aa13.99□□□□□ -0.17
HMGCS1-204ENST00000507293 A0A0G2JMZ2 1700 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 TCRBV5S4A2TA0A5A2 114 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 USP17L15C9J2P7 530 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 USP17L13C9JLJ4 530 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 USP17L11C9JVI0 530 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 USP17L18D6R9N7 530 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 USP17L22D6RA61 530 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 USP17L17D6RBQ6 530 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 USP17L19D6RCP7 530 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 USP17L20D6RJB6 530 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 RAB11FIP3O75154 756 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 VCAM1P19320 739 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 GUCY1A2P33402 732 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 USP14P54578 494 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 GABPAQ06546 454 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 USP17L24Q0WX57 530 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 GPR142Q7Z601 462 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 LCORLQ8N3X6 602 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 SDR42E1Q8WUS8 393 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 PAWRQ96IZ0 340 aaKnown RBP13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 MCM9Q9NXL9 1143 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 RBM27Q9P2N5 1060 aaKnown RBP13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 RCAN3Q9UKA8 241 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 TRIOBPQ9H2D6 2365 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 RLFQ13129 1914 aa13.98□□□□□ -0.17
HMGCS1-204ENST00000507293 PARP14Q460N5 1801 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 EVI5O60447 810 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 CNMDO75829 334 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 CYP2D6P10635 497 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 XRCC5P13010 732 aaKnown RBP13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 SEPT2Q15019 361 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 CATSPERGQ6ZRH7 1159 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 NECAB2Q7Z6G3 386 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 PLEKHH3Q7Z736 793 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 BOLA2Q9H3K6 86 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 ARMT1Q9H993 441 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 CWC22Q9HCG8 908 aaKnown RBP13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 PAG1Q9NWQ8 432 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 RABGAP1Q9Y3P9 1069 aa13.97□□□□□ -0.17
HMGCS1-204ENST00000507293 MPHOSPH10O00566 681 aaKnown RBP13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 RGS2P41220 211 aa13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 SLFNL1Q499Z3 407 aa13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 MORN1Q5T089 497 aa13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 MAP3K21Q5TCX8 1036 aa13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 ANKLE1Q8NAG6 615 aa13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 USP6NLQ92738 828 aa13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 APBA2Q99767 749 aa13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 RPAP3Q9H6T3 665 aaPredicted RBP13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 DCP1AQ9NPI6 582 aaPredicted RBP13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 ZNF236Q9UL36 1845 aa13.96□□□□□ -0.17
HMGCS1-204ENST00000507293 MBD4O95243 580 aa13.95□□□□□ -0.18
HMGCS1-204ENST00000507293 ATP5JP18859 108 aa13.95□□□□□ -0.18
HMGCS1-204ENST00000507293 ADD2P35612 726 aa13.95□□□□□ -0.18
HMGCS1-204ENST00000507293 CCNA1P78396 465 aa13.95□□□□□ -0.18
HMGCS1-204ENST00000507293 CCL14Q16627 93 aa13.95□□□□□ -0.18
HMGCS1-204ENST00000507293 WDR78Q5VTH9 848 aa13.95□□□□□ -0.18
HMGCS1-204ENST00000507293 TRMT44Q8IYL2 757 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-204ENST00000507293 SLC44A5Q8NCS7 719 aa13.95□□□□□ -0.18
HMGCS1-204ENST00000507293 PRO3102Q9H379 93 aa13.95□□□□□ -0.18
HMGCS1-204ENST00000507293 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 A0A1W2PRG0 241 aa13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 SPDYE16A6NNV3 312 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 PRKAB2O43741 272 aa13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 CHGBP05060 677 aa13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 MNX1P50219 401 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 CACNB2Q08289 660 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 MAP2K5Q13163 448 aa13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 C20orf194Q5TEA3 1177 aa13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 LBX2Q6XYB7 198 aa13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 DYNLL2Q96FJ2 89 aa13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 HAUS7Q99871 368 aa13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 BTBD7Q9P203 1132 aa13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 OGDHLQ9ULD0 1010 aa13.94□□□□□ -0.18
HMGCS1-204ENST00000507293 SMARCA5O60264 1052 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-204ENST00000507293 GLRX3O76003 335 aaKnown RBP13.93□□□□□ -0.18
HMGCS1-204ENST00000507293 CCND3P30281 292 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-204ENST00000507293 TMEM179Q6ZVK1 233 aa13.93□□□□□ -0.18
HMGCS1-204ENST00000507293 C7orf61Q8IZ16 206 aa13.93□□□□□ -0.18
HMGCS1-204ENST00000507293 LRRCC1Q9C099 1032 aa13.93□□□□□ -0.18
HMGCS1-204ENST00000507293 NBPF3Q9H094 633 aa13.93□□□□□ -0.18
HMGCS1-204ENST00000507293 C11orf49Q9H6J7 331 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms