RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 SLC44A5Q8NCS7 719 aa23.67■■□□□ 1.38
SNX25-204ENST00000506896 SLC45A1Q9Y2W3 748 aa23.67■■□□□ 1.38
SNX25-204ENST00000506896 RGS19P49795 217 aa23.66■■□□□ 1.38
SNX25-204ENST00000506896 TMEM179Q6ZVK1 233 aa23.66■■□□□ 1.38
SNX25-204ENST00000506896 EFCC1Q9HA90 598 aa23.66■■□□□ 1.38
SNX25-204ENST00000506896 MYH8P13535 1937 aa23.66■■□□□ 1.38
SNX25-204ENST00000506896 SMIM22K7EJ46 135 aa23.65■■□□□ 1.38
SNX25-204ENST00000506896 MPHOSPH10O00566 681 aaKnown RBP23.65■■□□□ 1.38
SNX25-204ENST00000506896 CHMLP26374 656 aa23.65■■□□□ 1.38
SNX25-204ENST00000506896 PPARAQ07869 468 aa23.65■■□□□ 1.38
SNX25-204ENST00000506896 RAB3GAP1Q15042 981 aa23.65■■□□□ 1.38
SNX25-204ENST00000506896 SH3D19Q5HYK7 790 aa23.65■■□□□ 1.38
SNX25-204ENST00000506896 GADL1Q6ZQY3 521 aa23.65■■□□□ 1.38
SNX25-204ENST00000506896 MKNK2Q9HBH9 465 aa23.65■■□□□ 1.38
SNX25-204ENST00000506896 PTPN22Q9Y2R2 807 aa23.65■■□□□ 1.38
SNX25-204ENST00000506896 C19orf81C9J6K1 198 aa23.64■■□□□ 1.37
SNX25-204ENST00000506896 PDE4BQ07343 736 aa23.64■■□□□ 1.37
SNX25-204ENST00000506896 SHROOM1Q2M3G4 852 aaPredicted RBP23.64■■□□□ 1.37
SNX25-204ENST00000506896 PROCA1Q8NCQ7 364 aaPredicted RBP23.64■■□□□ 1.37
SNX25-204ENST00000506896 LOC285556D6RIA3 1793 aa23.63■■□□□ 1.37
SNX25-204ENST00000506896 FGAP02671 866 aa23.63■■□□□ 1.37
SNX25-204ENST00000506896 CYP2C8P10632 490 aa23.63■■□□□ 1.37
SNX25-204ENST00000506896 BACE1P56817 501 aa23.63■■□□□ 1.37
SNX25-204ENST00000506896 LACTBP83111 547 aaPredicted RBP23.63■■□□□ 1.37
SNX25-204ENST00000506896 SKAP1Q86WV1 359 aa23.63■■□□□ 1.37
SNX25-204ENST00000506896 PARK7Q99497 189 aaKnown RBP23.63■■□□□ 1.37
SNX25-204ENST00000506896 CPA4Q9UI42 421 aa23.63■■□□□ 1.37
SNX25-204ENST00000506896 ANAPC4Q9UJX5 808 aa23.63■■□□□ 1.37
SNX25-204ENST00000506896 AGTPBP1Q9UPW5 1226 aa23.63■■□□□ 1.37
SNX25-204ENST00000506896 ZSWIM8A7E2V4 1837 aa23.63■■□□□ 1.37
SNX25-204ENST00000506896 USP17L10C9JJH3 530 aa23.62■■□□□ 1.37
SNX25-204ENST00000506896 BCRP11274 1271 aa23.62■■□□□ 1.37
SNX25-204ENST00000506896 ARHGEF6Q15052 776 aa23.62■■□□□ 1.37
SNX25-204ENST00000506896 DSCC1Q9BVC3 393 aa23.62■■□□□ 1.37
SNX25-204ENST00000506896 CENPFP49454 3210 aa23.62■■□□□ 1.37
SNX25-204ENST00000506896 AKR1B1P15121 316 aa23.61■■□□□ 1.37
SNX25-204ENST00000506896 RASA1P20936 1047 aa23.61■■□□□ 1.37
SNX25-204ENST00000506896 GUCY1A2P33402 732 aa23.61■■□□□ 1.37
SNX25-204ENST00000506896 MTMR2Q13614 643 aa23.61■■□□□ 1.37
SNX25-204ENST00000506896 SEPT2Q15019 361 aa23.61■■□□□ 1.37
SNX25-204ENST00000506896 TREML2Q5T2D2 321 aa23.61■■□□□ 1.37
SNX25-204ENST00000506896 ZNF444Q8N0Y2 327 aaPredicted RBP23.61■■□□□ 1.37
SNX25-204ENST00000506896 ARHGAP39Q9C0H5 1083 aa23.61■■□□□ 1.37
SNX25-204ENST00000506896 TMOD4Q9NZQ9 345 aa23.61■■□□□ 1.37
SNX25-204ENST00000506896 CTGFP29279 349 aa23.6■■□□□ 1.37
SNX25-204ENST00000506896 USP14P54578 494 aa23.6■■□□□ 1.37
SNX25-204ENST00000506896 HMGCS2P54868 508 aa23.6■■□□□ 1.37
SNX25-204ENST00000506896 FEZ1Q99689 392 aa23.6■■□□□ 1.37
SNX25-204ENST00000506896 KANSL2Q9H9L4 492 aa23.6■■□□□ 1.37
SNX25-204ENST00000506896 PABPC4Q13310 644 aaKnown RBP eCLIP23.59■■□□□ 1.37
SNX25-204ENST00000506896 STK11IPQ8N1F8 1099 aa23.59■■□□□ 1.37
SNX25-204ENST00000506896 KIAA1683Q9H0B3 1180 aa23.59■■□□□ 1.37
SNX25-204ENST00000506896 CTNNA3Q9UI47 895 aa23.59■■□□□ 1.37
SNX25-204ENST00000506896 GNRH1P01148 92 aa23.58■■□□□ 1.37
SNX25-204ENST00000506896 PCP11498 1178 aaKnown RBP23.58■■□□□ 1.37
SNX25-204ENST00000506896 KIF22Q14807 665 aa23.58■■□□□ 1.37
SNX25-204ENST00000506896 USP17L2Q6R6M4 530 aa23.58■■□□□ 1.37
SNX25-204ENST00000506896 SH2D4AQ9H788 454 aa23.58■■□□□ 1.37
SNX25-204ENST00000506896 ARHGEF10LQ9HCE6 1279 aa23.58■■□□□ 1.37
SNX25-204ENST00000506896 MGAMO43451 1857 aa23.58■■□□□ 1.36
SNX25-204ENST00000506896 SGSM2O43147 1006 aa23.57■■□□□ 1.36
SNX25-204ENST00000506896 ICA1Q05084 483 aa23.57■■□□□ 1.36
SNX25-204ENST00000506896 IL25Q9H293 177 aa23.57■■□□□ 1.36
SNX25-204ENST00000506896 PNMA3Q9UL41 463 aa23.57■■□□□ 1.36
SNX25-204ENST00000506896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.57■■□□□ 1.36
SNX25-204ENST00000506896 ZNF213O14771 459 aa23.56■■□□□ 1.36
SNX25-204ENST00000506896 PRDM1O75626 825 aa23.56■■□□□ 1.36
SNX25-204ENST00000506896 PSMC4P43686 418 aa23.56■■□□□ 1.36
SNX25-204ENST00000506896 CTDSPL2Q05D32 466 aa23.56■■□□□ 1.36
SNX25-204ENST00000506896 TRIM47Q96LD4 638 aa23.56■■□□□ 1.36
SNX25-204ENST00000506896 C12orf42Q96LP6 360 aa23.56■■□□□ 1.36
SNX25-204ENST00000506896 PLIN4Q96Q06 1357 aa23.55■■□□□ 1.36
SNX25-204ENST00000506896 ORC4O43929 436 aa23.55■■□□□ 1.36
SNX25-204ENST00000506896 FGRP09769 529 aa23.55■■□□□ 1.36
SNX25-204ENST00000506896 HOXA7P31268 230 aaPredicted RBP23.55■■□□□ 1.36
SNX25-204ENST00000506896 CASC1Q6TDU7 716 aa23.55■■□□□ 1.36
SNX25-204ENST00000506896 ACER1Q8TDN7 264 aa23.55■■□□□ 1.36
SNX25-204ENST00000506896 RNF41Q9H4P4 317 aaPredicted RBP23.55■■□□□ 1.36
SNX25-204ENST00000506896 EMILIN3Q9NT22 766 aa23.55■■□□□ 1.36
SNX25-204ENST00000506896 DOCK3Q8IZD9 2030 aa23.54■■□□□ 1.36
SNX25-204ENST00000506896 TSPY3P0CV98 308 aa23.54■■□□□ 1.36
SNX25-204ENST00000506896 TSPY8P0CW00 308 aa23.54■■□□□ 1.36
SNX25-204ENST00000506896 OSBPP22059 807 aa23.54■■□□□ 1.36
SNX25-204ENST00000506896 NT5C2P49902 561 aa23.54■■□□□ 1.36
SNX25-204ENST00000506896 PRMT2P55345 433 aa23.54■■□□□ 1.36
SNX25-204ENST00000506896 SOX10P56693 466 aa23.54■■□□□ 1.36
SNX25-204ENST00000506896 IMMTQ16891 758 aaKnown RBP23.54■■□□□ 1.36
SNX25-204ENST00000506896 PPP4R3BQ5MIZ7 849 aa23.54■■□□□ 1.36
SNX25-204ENST00000506896 ARMC5Q96C12 935 aa23.54■■□□□ 1.36
SNX25-204ENST00000506896 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.54■■□□□ 1.36
SNX25-204ENST00000506896 TMX2Q9Y320 296 aa23.54■■□□□ 1.36
SNX25-204ENST00000506896 PTCH2Q9Y6C5 1203 aa23.54■■□□□ 1.36
SNX25-204ENST00000506896 GREB1LQ9C091 1923 aaPredicted RBP23.54■■□□□ 1.36
SNX25-204ENST00000506896 ZYXQ15942 572 aaKnown RBP23.53■■□□□ 1.36
SNX25-204ENST00000506896 AKNAD1Q5T1N1 836 aa23.53■■□□□ 1.36
SNX25-204ENST00000506896 MFSD6Q6ZSS7 791 aa23.53■■□□□ 1.36
SNX25-204ENST00000506896 SIAH1Q8IUQ4 282 aa23.53■■□□□ 1.36
SNX25-204ENST00000506896 NEDD1Q8NHV4 660 aa23.53■■□□□ 1.36
SNX25-204ENST00000506896 SMCR8Q8TEV9 937 aaPredicted RBP23.53■■□□□ 1.36
SNX25-204ENST00000506896 STAG1Q8WVM7 1258 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms