RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 CYP4F22Q6NT55 531 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 CYB5R4Q7L1T6 521 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 ZNF444Q8N0Y2 327 aaPredicted RBP10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 ACER1Q8TDN7 264 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 SLC10A4Q96EP9 437 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 LRRC2Q9BYS8 371 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 GPHNQ9NQX3 736 aaPredicted RBP10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 SNX14Q9Y5W7 946 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 KDM4AO75164 1064 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 SLC3A2P08195 630 aaKnown RBP10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 HSPA4P34932 840 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 ZNF157P51786 506 aaPredicted RBP10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 ATP2B2Q01814 1243 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 PDE4BQ07343 736 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 STAG1Q8WVM7 1258 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 HOOK2Q96ED9 719 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 ZSWIM5Q9P217 1185 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 ZBTB21Q9ULJ3 1066 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 CSADQ9Y600 493 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 TLL2Q9Y6L7 1015 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 ZHX2Q9Y6X8 837 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 ZMYM6O95789 1325 aa10.46□□□□□ -0.74
SCAMP1-202ENST00000506858 ROBO3Q96MS0 1386 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 TRPM7Q96QT4 1865 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 CTNND1O60716 968 aaKnown RBP10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 FGRP09769 529 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 ZYXQ15942 572 aaKnown RBP10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 MAP3K11Q16584 847 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 SIAH1Q8IUQ4 282 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 ANKRD13AQ8IZ07 590 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 SCYL3Q8IZE3 742 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 OPTNQ96CV9 577 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 SENP2Q9HC62 589 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 PICK1Q9NRD5 415 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 IL17RBQ9NRM6 502 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 SWAP70Q9UH65 585 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 MTMR7Q9Y216 660 aa10.45□□□□□ -0.74
SCAMP1-202ENST00000506858 A0A1W2PRG0 241 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 TRIM75PA6NK02 468 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 TSPY2A6NKD2 308 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 ORC4O43929 436 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 AOC2O75106 756 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 TSPY3P0CV98 308 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 TSPY8P0CW00 308 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 PTPRAP18433 802 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 ECE1P42892 770 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 SPP2Q13103 211 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 RGMBQ6NW40 437 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 CEP95Q96GE4 821 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 JAKMIP1Q96N16 626 aaKnown RBP10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 LARP6Q9BRS8 491 aaKnown RBP10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 SCUBE2Q9NQ36 999 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 TAOK2Q9UL54 1235 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 TRPC6Q9Y210 931 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 IRF6O14896 467 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 ANTXR2P58335 489 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 FKBP1BP68106 108 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 KIAA1755Q5JYT7 1200 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 RASGRP2Q7LDG7 609 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 RASAL3Q86YV0 1011 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 NEDD1Q8NHV4 660 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 KCNB2Q92953 911 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 WNK4Q96J92 1243 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 UPF3BQ9BZI7 483 aaKnown RBP10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 CABP5Q9NP86 173 aa10.44□□□□□ -0.74
SCAMP1-202ENST00000506858 RAD21O60216 631 aa10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 ASNSP08243 561 aa10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 EEF2P13639 858 aaKnown RBP10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 HSPA6P17066 643 aa10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 DEFB115Q30KQ5 88 aa10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 NOL9Q5SY16 702 aaKnown RBP10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 RNF20Q5VTR2 975 aa10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 RAB11FIP4Q86YS3 637 aa10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 MB21D2Q8IYB1 491 aaPredicted RBP10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 LRRC47Q8N1G4 583 aaKnown RBP10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 C22orf23Q9BZE7 217 aa10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 RNF41Q9H4P4 317 aaPredicted RBP10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 CLIP2Q9UDT6 1046 aa10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 PCDHB8Q9UN66 801 aa10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 LAMB1P07942 1786 aa10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 PAPPA2Q9BXP8 1791 aa10.43□□□□□ -0.74
SCAMP1-202ENST00000506858 OTOFQ9HC10 1997 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 IGKV6D-41A0A0C4DH26 115 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 SPDYE5A6NIY4 337 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 USP17L5A8MUK1 530 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 FAM155AB1AL88 458 aaPredicted RBP10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 ZKSCAN1P17029 563 aaPredicted RBP10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 VEGFBP49765 207 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 ICA1Q05084 483 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 TRDNQ13061 729 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 SPRYD7Q5W111 196 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 TMEM179Q6ZVK1 233 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 RALYLQ86SE5 291 aaKnown RBP10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 ERO1BQ86YB8 467 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 NCOA7Q8NI08 942 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 ESR2Q92731 530 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 CAPNS2Q96L46 248 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 CCDC17Q96LX7 622 aa10.42□□□□□ -0.74
SCAMP1-202ENST00000506858 NEK1Q96PY6 1258 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms