RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 GADD45BO75293 160 aaPredicted RBP21.48■■□□□ 1.03
SMN2-206ENST00000506734 ENTPD3O75355 529 aa21.48■■□□□ 1.03
SMN2-206ENST00000506734 KIF23Q02241 960 aaPredicted RBP21.48■■□□□ 1.03
SMN2-206ENST00000506734 KRT40Q6A162 431 aa21.48■■□□□ 1.03
SMN2-206ENST00000506734 CFAP45Q9UL16 551 aa21.48■■□□□ 1.03
SMN2-206ENST00000506734 SIPA1L1O43166 1804 aa21.47■■□□□ 1.03
SMN2-206ENST00000506734 SPDYE2BA6NHP3 402 aa21.47■■□□□ 1.03
SMN2-206ENST00000506734 PRPF3O43395 683 aaKnown RBP21.47■■□□□ 1.03
SMN2-206ENST00000506734 SPDYE6P0CI01 402 aa21.47■■□□□ 1.03
SMN2-206ENST00000506734 KIF5BP33176 963 aa21.47■■□□□ 1.03
SMN2-206ENST00000506734 TRIM29Q14134 588 aa21.47■■□□□ 1.03
SMN2-206ENST00000506734 ATRNL1Q5VV63 1379 aa21.47■■□□□ 1.03
SMN2-206ENST00000506734 KLHL34Q8N239 644 aa21.47■■□□□ 1.03
SMN2-206ENST00000506734 BCS1LQ9Y276 419 aa21.47■■□□□ 1.03
SMN2-206ENST00000506734 PLEKHA8P1O95397 391 aa21.46■■□□□ 1.03
SMN2-206ENST00000506734 GUCY1A2P33402 732 aa21.46■■□□□ 1.03
SMN2-206ENST00000506734 CXCL9Q07325 125 aa21.46■■□□□ 1.03
SMN2-206ENST00000506734 ZFPM1Q8IX07 1006 aa21.46■■□□□ 1.03
SMN2-206ENST00000506734 OGFOD1Q8N543 542 aa21.46■■□□□ 1.03
SMN2-206ENST00000506734 MTMR14Q8NCE2 650 aa21.46■■□□□ 1.03
SMN2-206ENST00000506734 JDP2Q8WYK2 163 aa21.46■■□□□ 1.03
SMN2-206ENST00000506734 PRMT6Q96LA8 375 aaPredicted RBP21.46■■□□□ 1.03
SMN2-206ENST00000506734 ZNF396Q96N95 335 aaPredicted RBP21.46■■□□□ 1.03
SMN2-206ENST00000506734 TMEM47Q9BQJ4 181 aa21.46■■□□□ 1.03
SMN2-206ENST00000506734 TDRD3Q9H7E2 651 aaKnown RBP21.46■■□□□ 1.03
SMN2-206ENST00000506734 GJB4Q9NTQ9 266 aa21.46■■□□□ 1.03
SMN2-206ENST00000506734 MYH6P13533 1939 aa21.46■■□□□ 1.03
SMN2-206ENST00000506734 CNTNAP5Q8WYK1 1306 aa21.45■■□□□ 1.02
SMN2-206ENST00000506734 GREB1LQ9C091 1923 aaPredicted RBP21.45■■□□□ 1.02
SMN2-206ENST00000506734 IGKV6D-41A0A0C4DH26 115 aa21.45■■□□□ 1.02
SMN2-206ENST00000506734 SHMT1P34896 483 aa21.45■■□□□ 1.02
SMN2-206ENST00000506734 MMP14P50281 582 aa21.45■■□□□ 1.02
SMN2-206ENST00000506734 CACNB3P54284 484 aa21.45■■□□□ 1.02
SMN2-206ENST00000506734 GRM4Q14833 912 aa21.45■■□□□ 1.02
SMN2-206ENST00000506734 CMTR1Q8N1G2 835 aaKnown RBP21.45■■□□□ 1.02
SMN2-206ENST00000506734 LEO1Q8WVC0 666 aaPredicted RBP21.45■■□□□ 1.02
SMN2-206ENST00000506734 SPATA32Q96LK8 384 aa21.45■■□□□ 1.02
SMN2-206ENST00000506734 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.45■■□□□ 1.02
SMN2-206ENST00000506734 PI4KBQ9UBF8 816 aa21.45■■□□□ 1.02
SMN2-206ENST00000506734 UBE2Q2LH0YL09 131 aa21.44■■□□□ 1.02
SMN2-206ENST00000506734 AKAP17AQ02040 695 aaKnown RBP21.44■■□□□ 1.02
SMN2-206ENST00000506734 CIAPIN1Q6FI81 312 aa21.44■■□□□ 1.02
SMN2-206ENST00000506734 CAVIN1Q6NZI2 390 aaKnown RBP21.44■■□□□ 1.02
SMN2-206ENST00000506734 SH3BP5LQ7L8J4 393 aa21.44■■□□□ 1.02
SMN2-206ENST00000506734 METTL16Q86W50 562 aaKnown RBP21.44■■□□□ 1.02
SMN2-206ENST00000506734 TFIP11Q9UBB9 837 aaKnown RBP21.44■■□□□ 1.02
SMN2-206ENST00000506734 STX8Q9UNK0 236 aa21.44■■□□□ 1.02
SMN2-206ENST00000506734 DDTLA6NHG4 134 aaPredicted RBP21.44■■□□□ 1.02
SMN2-206ENST00000506734 TOP1P11387 765 aaKnown RBP21.44■■□□□ 1.02
SMN2-206ENST00000506734 GNAQP50148 359 aa21.44■■□□□ 1.02
SMN2-206ENST00000506734 DLGAP5Q15398 846 aa21.44■■□□□ 1.02
SMN2-206ENST00000506734 PKN1Q16512 942 aa21.44■■□□□ 1.02
SMN2-206ENST00000506734 CCDC82Q8N4S0 544 aa21.44■■□□□ 1.02
SMN2-206ENST00000506734 SRBD1Q8N5C6 995 aaKnown RBP21.44■■□□□ 1.02
SMN2-206ENST00000506734 CEP95Q96GE4 821 aa21.44■■□□□ 1.02
SMN2-206ENST00000506734 CCDC17Q96LX7 622 aa21.44■■□□□ 1.02
SMN2-206ENST00000506734 ZBTB12Q9Y330 459 aaPredicted RBP21.44■■□□□ 1.02
SMN2-206ENST00000506734 KIF28PB7ZC32 967 aa21.43■■□□□ 1.02
SMN2-206ENST00000506734 AKR1B1P15121 316 aa21.43■■□□□ 1.02
SMN2-206ENST00000506734 U2AF2P26368 475 aaKnown RBP eCLIP21.43■■□□□ 1.024e-10■■■□□ 18.5
SMN2-206ENST00000506734 TCP10Q12799 353 aa21.43■■□□□ 1.02
SMN2-206ENST00000506734 TNIP1Q15025 636 aa21.43■■□□□ 1.02
SMN2-206ENST00000506734 FOXP4Q8IVH2 680 aaPredicted RBP21.43■■□□□ 1.02
SMN2-206ENST00000506734 NLGN2Q8NFZ4 835 aa21.43■■□□□ 1.02
SMN2-206ENST00000506734 DNAJC18Q9H819 358 aa21.43■■□□□ 1.02
SMN2-206ENST00000506734 MTMR4Q9NYA4 1195 aa21.43■■□□□ 1.02
SMN2-206ENST00000506734 TMOD2Q9NZR1 351 aa21.43■■□□□ 1.02
SMN2-206ENST00000506734 RBM27Q9P2N5 1060 aaKnown RBP21.43■■□□□ 1.02
SMN2-206ENST00000506734 MMP1P03956 469 aa21.42■■□□□ 1.02
SMN2-206ENST00000506734 MYSM1Q5VVJ2 828 aa21.42■■□□□ 1.02
SMN2-206ENST00000506734 SPON1Q9HCB6 807 aa21.42■■□□□ 1.02
SMN2-206ENST00000506734 MAD2L2Q9UI95 211 aa21.42■■□□□ 1.02
SMN2-206ENST00000506734 RCOR1Q9UKL0 485 aa21.42■■□□□ 1.02
SMN2-206ENST00000506734 SPDYE2Q495Y8 402 aa21.41■■□□□ 1.02
SMN2-206ENST00000506734 PPP4R3BQ5MIZ7 849 aa21.41■■□□□ 1.02
SMN2-206ENST00000506734 FKBP1CQ5VVH2 108 aa21.41■■□□□ 1.02
SMN2-206ENST00000506734 SYAP1Q96A49 352 aaPredicted RBP21.41■■□□□ 1.02
SMN2-206ENST00000506734 ZBED3Q96IU2 234 aaPredicted RBP21.41■■□□□ 1.02
SMN2-206ENST00000506734 USP28Q96RU2 1077 aa21.41■■□□□ 1.02
SMN2-206ENST00000506734 TMEM63CQ9P1W3 806 aa21.41■■□□□ 1.02
SMN2-206ENST00000506734 ZNF70Q9UC06 446 aaPredicted RBP21.41■■□□□ 1.02
SMN2-206ENST00000506734 V9GY48 417 aaPredicted RBP21.41■■□□□ 1.02
SMN2-206ENST00000506734 XBP1P17861 261 aa21.4■■□□□ 1.02
SMN2-206ENST00000506734 RPS12P25398 132 aaKnown RBP21.4■■□□□ 1.02
SMN2-206ENST00000506734 DEKP35659 375 aaKnown RBP21.4■■□□□ 1.02
SMN2-206ENST00000506734 ZSCAN23Q3MJ62 389 aa21.4■■□□□ 1.02
SMN2-206ENST00000506734 TATDN1Q6P1N9 297 aa21.4■■□□□ 1.02
SMN2-206ENST00000506734 LZTS2Q9BRK4 669 aa21.4■■□□□ 1.02
SMN2-206ENST00000506734 RTEL1Q9NZ71 1219 aa21.4■■□□□ 1.02
SMN2-206ENST00000506734 ISY1Q9ULR0 285 aaKnown RBP21.4■■□□□ 1.02
SMN2-206ENST00000506734 PALM3A6NDB9 673 aaPredicted RBP21.4■■□□□ 1.02
SMN2-206ENST00000506734 ZNF445P59923 1031 aa21.4■■□□□ 1.02
SMN2-206ENST00000506734 SAFBQ15424 915 aaKnown RBP eCLIP21.4■■□□□ 1.02
SMN2-206ENST00000506734 ZSCAN29Q8IWY8 852 aaPredicted RBP21.4■■□□□ 1.02
SMN2-206ENST00000506734 FOXP1Q9H334 677 aaPredicted RBP21.4■■□□□ 1.02
SMN2-206ENST00000506734 POLR3EQ9NVU0 708 aa21.4■■□□□ 1.02
SMN2-206ENST00000506734 RASSF7Q02833 373 aa21.39■■□□□ 1.01
SMN2-206ENST00000506734 FSD2A1L4K1 749 aa21.38■■□□□ 1.01
SMN2-206ENST00000506734 FZD9O00144 591 aa21.38■■□□□ 1.01
SMN2-206ENST00000506734 TTLL1O95922 423 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms