RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TSPY3P0CV98 308 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 TSPY8P0CW00 308 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 CCDC192P0DO97 292 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 CACNB3P54284 484 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 PLCB2Q00722 1185 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 FAM160A1Q05DH4 1040 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 SLC39A14Q15043 492 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 CCDC73Q6ZRK6 1079 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 TBC1D22AQ8WUA7 517 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 MRPS27Q92552 414 aaKnown RBP14.1□□□□□ -0.15
LIN54-206ENST00000506560 RNF26Q9BY78 433 aaPredicted RBP14.1□□□□□ -0.15
LIN54-206ENST00000506560 DNAJC25Q9H1X3 360 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 STX8Q9UNK0 236 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 ROBO3Q96MS0 1386 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 H0YIN7 160 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 RCAN1P53805 252 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 NPY5RQ15761 445 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 FAM163AQ96GL9 167 aaPredicted RBP14.1□□□□□ -0.15
LIN54-206ENST00000506560 PCDHB6Q9Y5E3 794 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 SRCAPQ6ZRS2 3230 aa14.1□□□□□ -0.15
LIN54-206ENST00000506560 DDAH1O94760 285 aa14.09□□□□□ -0.15
LIN54-206ENST00000506560 GOLGA8HP0CJ92 632 aa14.09□□□□□ -0.15
LIN54-206ENST00000506560 KIAA0825Q8IV33 1275 aa14.09□□□□□ -0.15
LIN54-206ENST00000506560 PNMA1Q8ND90 353 aa14.09□□□□□ -0.15
LIN54-206ENST00000506560 KCNG4Q8TDN1 519 aa14.09□□□□□ -0.15
LIN54-206ENST00000506560 TRIM44Q96DX7 344 aaPredicted RBP14.09□□□□□ -0.15
LIN54-206ENST00000506560 NFIAQ12857 509 aa14.09□□□□□ -0.15
LIN54-206ENST00000506560 SHC4Q6S5L8 630 aa14.09□□□□□ -0.15
LIN54-206ENST00000506560 C11orf57Q6ZUT1 292 aaPredicted RBP14.09□□□□□ -0.15
LIN54-206ENST00000506560 ZFPM1Q8IX07 1006 aa14.09□□□□□ -0.15
LIN54-206ENST00000506560 ZNF444Q8N0Y2 327 aaPredicted RBP14.09□□□□□ -0.15
LIN54-206ENST00000506560 CABP5Q9NP86 173 aa14.09□□□□□ -0.15
LIN54-206ENST00000506560 STK32BQ9NY57 414 aa14.09□□□□□ -0.15
LIN54-206ENST00000506560 G3V3G9 751 aa14.08□□□□□ -0.16
LIN54-206ENST00000506560 PRPF3O43395 683 aaKnown RBP14.08□□□□□ -0.16
LIN54-206ENST00000506560 PRKCSHP14314 528 aaPredicted RBP14.08□□□□□ -0.16
LIN54-206ENST00000506560 AOC3Q16853 763 aa14.08□□□□□ -0.16
LIN54-206ENST00000506560 DCAF8Q5TAQ9 597 aa14.08□□□□□ -0.16
LIN54-206ENST00000506560 CTCFLQ8NI51 663 aaPredicted RBP14.08□□□□□ -0.16
LIN54-206ENST00000506560 WASF1Q92558 559 aa14.08□□□□□ -0.16
LIN54-206ENST00000506560 KAT14Q9H8E8 782 aa14.08□□□□□ -0.16
LIN54-206ENST00000506560 PFKFB1P16118 471 aa14.08□□□□□ -0.16
LIN54-206ENST00000506560 AKAP17AQ02040 695 aaKnown RBP14.08□□□□□ -0.16
LIN54-206ENST00000506560 TMED8Q6PL24 325 aaPredicted RBP14.08□□□□□ -0.16
LIN54-206ENST00000506560 C16orf86Q6ZW13 317 aa14.08□□□□□ -0.16
LIN54-206ENST00000506560 GPKOWQ92917 476 aaPredicted RBP eCLIP14.08□□□□□ -0.16
LIN54-206ENST00000506560 EYA3Q99504 573 aa14.08□□□□□ -0.16
LIN54-206ENST00000506560 TMEM47Q9BQJ4 181 aa14.08□□□□□ -0.16
LIN54-206ENST00000506560 CBX8Q9HC52 389 aa14.08□□□□□ -0.16
LIN54-206ENST00000506560 KINO60870 393 aaKnown RBP14.07□□□□□ -0.16
LIN54-206ENST00000506560 APOBEC3HQ6NTF7 200 aaKnown RBP14.07□□□□□ -0.16
LIN54-206ENST00000506560 PHF20Q9BVI0 1012 aa14.07□□□□□ -0.16
LIN54-206ENST00000506560 A0A1W2PQ27 194 aa14.07□□□□□ -0.16
LIN54-206ENST00000506560 A0A1W2PQ64 194 aa14.07□□□□□ -0.16
LIN54-206ENST00000506560 A0A1W2PQD8 194 aa14.07□□□□□ -0.16
LIN54-206ENST00000506560 CYTH3O43739 400 aa14.07□□□□□ -0.16
LIN54-206ENST00000506560 EIF6P56537 245 aaKnown RBP14.07□□□□□ -0.16
LIN54-206ENST00000506560 SHROOM1Q2M3G4 852 aaPredicted RBP14.07□□□□□ -0.16
LIN54-206ENST00000506560 TYW1BQ6NUM6 668 aa14.07□□□□□ -0.16
LIN54-206ENST00000506560 CDC42EP5Q6NZY7 148 aa14.07□□□□□ -0.16
LIN54-206ENST00000506560 USP40Q9NVE5 1235 aa14.07□□□□□ -0.16
LIN54-206ENST00000506560 RBM28Q9NW13 759 aaKnown RBP14.07□□□□□ -0.16
LIN54-206ENST00000506560 ADCY5O95622 1261 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 SAFBQ15424 915 aaKnown RBP eCLIP14.06□□□□□ -0.16
LIN54-206ENST00000506560 AMOTL1Q8IY63 956 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 C7orf43Q8WVR3 580 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 CEP95Q96GE4 821 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 MAD2L2Q9UI95 211 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 FAM196BA6NMK8 535 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 ESPNB1AK53 854 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 C21orf2O43822 256 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 ECE2O60344 883 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 ZNF202O95125 648 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 CALM1P0DP23 149 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 CALM2P0DP24 149 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 CALM3P0DP25 149 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 DGKHQ86XP1 1220 aa14.06□□□□□ -0.16
LIN54-206ENST00000506560 FOXP1Q9H334 677 aaPredicted RBP14.06□□□□□ -0.16
LIN54-206ENST00000506560 SASS6Q6UVJ0 657 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 FAM200AQ8TCP9 573 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.05□□□□□ -0.16
LIN54-206ENST00000506560 FOCADQ5VW36 1801 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 PLCG2P16885 1265 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 TCP10Q12799 353 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 STYK1Q6J9G0 422 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 USP49Q70CQ1 688 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 RASGRP4Q8TDF6 673 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 SDF4Q9BRK5 362 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 TMX4Q9H1E5 349 aaPredicted RBP14.05□□□□□ -0.16
LIN54-206ENST00000506560 RGPD3A6NKT7 1758 aaPredicted RBP14.05□□□□□ -0.16
LIN54-206ENST00000506560 RGPD4Q7Z3J3 1758 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 BIN1O00499 593 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 AKR1B1P15121 316 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 CMA1P23946 247 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 PPP2R5BQ15173 497 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 ISM2Q6H9L7 571 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 USP17L2Q6R6M4 530 aa14.05□□□□□ -0.16
LIN54-206ENST00000506560 YDJCA8MPS7 323 aa14.04□□□□□ -0.16
LIN54-206ENST00000506560 SCG2P13521 617 aa14.04□□□□□ -0.16
LIN54-206ENST00000506560 HMGB2P26583 209 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms