RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 COL11A1P12107 1806 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-215ENST00000506161 SZT2Q5T011 3432 aa20.2■□□□□ 0.82
PDLIM7-215ENST00000506161 C19orf81C9J6K1 198 aa20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 M0R2C6 588 aa20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 GRK4P32298 578 aa20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 Q3C1V9 767 aa20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 SIAH1Q8IUQ4 282 aa20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 RAET1EQ8TD07 263 aa20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 C12orf42Q96LP6 360 aa20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 TMOD4Q9NZQ9 345 aa20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 RBM27Q9P2N5 1060 aaKnown RBP20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 RBPJLQ9UBG7 517 aa20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 MORF4L1Q9UBU8 362 aa20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 PNMA3Q9UL41 463 aa20.19■□□□□ 0.82
PDLIM7-215ENST00000506161 USP17L12C9JPN9 530 aa20.18■□□□□ 0.82
PDLIM7-215ENST00000506161 USP17L21D6R901 530 aa20.18■□□□□ 0.82
PDLIM7-215ENST00000506161 TNPO2O14787 897 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-215ENST00000506161 CNMDO75829 334 aa20.18■□□□□ 0.82
PDLIM7-215ENST00000506161 AKR1B1P15121 316 aa20.18■□□□□ 0.82
PDLIM7-215ENST00000506161 HERVK_113P62684 666 aa20.18■□□□□ 0.82
PDLIM7-215ENST00000506161 C12orf60Q5U649 245 aa20.18■□□□□ 0.82
PDLIM7-215ENST00000506161 SEC62Q99442 399 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-215ENST00000506161 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.18■□□□□ 0.824e-11■■■□□ 18.5
PDLIM7-215ENST00000506161 SLC4A4Q9Y6R1 1079 aa20.18■□□□□ 0.82
PDLIM7-215ENST00000506161 CTR9Q6PD62 1173 aa20.17■□□□□ 0.82
PDLIM7-215ENST00000506161 USP17L2Q6R6M4 530 aa20.17■□□□□ 0.82
PDLIM7-215ENST00000506161 STRBPQ96SI9 672 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-215ENST00000506161 EPB41L4AQ9HCS5 686 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-215ENST00000506161 GJD2Q9UKL4 321 aa20.17■□□□□ 0.82
PDLIM7-215ENST00000506161 ALPK3Q96L96 1907 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 MYH4Q9Y623 1939 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 GSG1L2A8MUP6 293 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 ADCY3O60266 1144 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 VCAM1P19320 739 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 HOXD10P28358 340 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 GCLCP48506 637 aaPredicted RBP20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 IRX3P78415 501 aaPredicted RBP20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 TRIM32Q13049 653 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 DPF3Q92784 378 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 KIAA1683Q9H0B3 1180 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 UNC93B1Q9H1C4 597 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 PORCNQ9H237 461 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 ATP8A2Q9NTI2 1148 aa20.16■□□□□ 0.82
PDLIM7-215ENST00000506161 MPHOSPH10O00566 681 aaKnown RBP20.15■□□□□ 0.82
PDLIM7-215ENST00000506161 CCL5P13501 91 aa20.15■□□□□ 0.82
PDLIM7-215ENST00000506161 CDK8P49336 464 aa20.15■□□□□ 0.82
PDLIM7-215ENST00000506161 PABPC4Q13310 644 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDLIM7-215ENST00000506161 FEZ1Q99689 392 aa20.15■□□□□ 0.82
PDLIM7-215ENST00000506161 CEP290O15078 2479 aa20.15■□□□□ 0.82
PDLIM7-215ENST00000506161 TTC41PQ6P2S7 1318 aa20.14■□□□□ 0.81
PDLIM7-215ENST00000506161 RNF113AO15541 343 aaKnown RBP20.14■□□□□ 0.81
PDLIM7-215ENST00000506161 IRF5Q13568 498 aa20.14■□□□□ 0.81
PDLIM7-215ENST00000506161 C16orf86Q6ZW13 317 aa20.14■□□□□ 0.81
PDLIM7-215ENST00000506161 STK11IPQ8N1F8 1099 aa20.14■□□□□ 0.81
PDLIM7-215ENST00000506161 APPBP2Q92624 585 aa20.14■□□□□ 0.81
PDLIM7-215ENST00000506161 PAGR1Q9BTK6 254 aa20.14■□□□□ 0.81
PDLIM7-215ENST00000506161 FRMPD3Q5JV73 1810 aa20.13■□□□□ 0.81
PDLIM7-215ENST00000506161 ANKRD45Q5TZF3 282 aa20.13■□□□□ 0.81
PDLIM7-215ENST00000506161 CATSPERGQ6ZRH7 1159 aa20.13■□□□□ 0.81
PDLIM7-215ENST00000506161 EXOC6Q8TAG9 804 aa20.13■□□□□ 0.81
PDLIM7-215ENST00000506161 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.13■□□□□ 0.81
PDLIM7-215ENST00000506161 CABP5Q9NP86 173 aa20.13■□□□□ 0.81
PDLIM7-215ENST00000506161 TAOK2Q9UL54 1235 aa20.13■□□□□ 0.81
PDLIM7-215ENST00000506161 FOXP2O15409 715 aa20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 GPAA1O43292 621 aa20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 INHAP05111 366 aa20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 MX1P20591 662 aa20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 ERVK-9P63128 1117 aa20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 ERVK-24P63145 666 aa20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 HDAC1Q13547 482 aaPredicted RBP20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 ZSCAN25Q6NSZ9 544 aa20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 SLAIN1Q8ND83 568 aa20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 RPAP3Q9H6T3 665 aaPredicted RBP20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 BTBD7Q9P203 1132 aa20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 ZNFX1Q9P2E3 1918 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-215ENST00000506161 SPDYE16A6NNV3 312 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-215ENST00000506161 IGHDP01880 384 aa20.11■□□□□ 0.81
PDLIM7-215ENST00000506161 COA7Q96BR5 231 aa20.11■□□□□ 0.81
PDLIM7-215ENST00000506161 GPATCH3Q96I76 525 aa20.11■□□□□ 0.81
PDLIM7-215ENST00000506161 SWAP70Q9UH65 585 aa20.11■□□□□ 0.81
PDLIM7-215ENST00000506161 USP17L15C9J2P7 530 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 USP17L13C9JLJ4 530 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 USP17L11C9JVI0 530 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 USP17L18D6R9N7 530 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 USP17L22D6RA61 530 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 USP17L17D6RBQ6 530 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 USP17L19D6RCP7 530 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 USP17L20D6RJB6 530 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 USP17L24Q0WX57 530 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 CCDC129Q6ZRS4 1044 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 TMEM179Q6ZVK1 233 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 GPRC5AQ8NFJ5 357 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 PXYLP1Q8TE99 480 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 TRIB2Q92519 343 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 RNF208Q9H0X6 261 aa20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 BIN2Q9UBW5 565 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-215ENST00000506161 ROBO3Q96MS0 1386 aa20.09■□□□□ 0.81
PDLIM7-215ENST00000506161 GLRX3O76003 335 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-215ENST00000506161 SBK1Q52WX2 424 aa20.09■□□□□ 0.81
PDLIM7-215ENST00000506161 ZMYM1Q5SVZ6 1142 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms