RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 TRPV1Q8NER1 839 aa12.7□□□□□ -0.38
BRIX1-202ENST00000506023 ACER1Q8TDN7 264 aa12.7□□□□□ -0.38
BRIX1-202ENST00000506023 NUDT12Q9BQG2 462 aa12.7□□□□□ -0.38
BRIX1-202ENST00000506023 DHX36Q9H2U1 1008 aaKnown RBP12.7□□□□□ -0.38
BRIX1-202ENST00000506023 ANTXR1Q9H6X2 564 aa12.7□□□□□ -0.38
BRIX1-202ENST00000506023 BTBD7Q9P203 1132 aa12.7□□□□□ -0.38
BRIX1-202ENST00000506023 UQCRFS1P1P0C7P4 283 aa12.69□□□□□ -0.38
BRIX1-202ENST00000506023 ZKSCAN1P17029 563 aaPredicted RBP12.69□□□□□ -0.38
BRIX1-202ENST00000506023 G3BP1Q13283 466 aaKnown RBP eCLIP12.69□□□□□ -0.38
BRIX1-202ENST00000506023 TATDN1Q6P1N9 297 aa12.69□□□□□ -0.38
BRIX1-202ENST00000506023 ATF7IPQ6VMQ6 1270 aa12.69□□□□□ -0.38
BRIX1-202ENST00000506023 MIGA1Q8NAN2 632 aa12.69□□□□□ -0.38
BRIX1-202ENST00000506023 NPLOC4Q8TAT6 608 aa12.69□□□□□ -0.38
BRIX1-202ENST00000506023 SSH3Q8TE77 659 aa12.69□□□□□ -0.38
BRIX1-202ENST00000506023 SOCS4Q8WXH5 440 aa12.69□□□□□ -0.38
BRIX1-202ENST00000506023 EAF2Q96CJ1 260 aaPredicted RBP12.69□□□□□ -0.38
BRIX1-202ENST00000506023 C12orf42Q96LP6 360 aa12.69□□□□□ -0.38
BRIX1-202ENST00000506023 GUCD1Q96NT3 240 aa12.69□□□□□ -0.38
BRIX1-202ENST00000506023 GPR108Q9NPR9 543 aa12.69□□□□□ -0.38
BRIX1-202ENST00000506023 TMOD4Q9NZQ9 345 aa12.69□□□□□ -0.38
BRIX1-202ENST00000506023 C19orf81C9J6K1 198 aa12.68□□□□□ -0.38
BRIX1-202ENST00000506023 TTC39AQ5SRH9 613 aa12.68□□□□□ -0.38
BRIX1-202ENST00000506023 GPR153Q6NV75 609 aa12.68□□□□□ -0.38
BRIX1-202ENST00000506023 PLEKHH3Q7Z736 793 aa12.68□□□□□ -0.38
BRIX1-202ENST00000506023 FOXP4Q8IVH2 680 aaPredicted RBP12.68□□□□□ -0.38
BRIX1-202ENST00000506023 APBA2Q99767 749 aa12.68□□□□□ -0.38
BRIX1-202ENST00000506023 UBE2OQ9C0C9 1292 aaKnown RBP12.68□□□□□ -0.38
BRIX1-202ENST00000506023 CCDC8Q9H0W5 538 aaPredicted RBP12.68□□□□□ -0.38
BRIX1-202ENST00000506023 HDAC5Q9UQL6 1122 aa12.68□□□□□ -0.38
BRIX1-202ENST00000506023 MYH7P12883 1935 aa12.68□□□□□ -0.38
BRIX1-202ENST00000506023 SMIM22K7EJ46 135 aa12.67□□□□□ -0.38
BRIX1-202ENST00000506023 RLBP1P12271 317 aa12.67□□□□□ -0.38
BRIX1-202ENST00000506023 VCAM1P19320 739 aa12.67□□□□□ -0.38
BRIX1-202ENST00000506023 MAPK4P31152 587 aa12.67□□□□□ -0.38
BRIX1-202ENST00000506023 SHMT1P34896 483 aa12.67□□□□□ -0.38
BRIX1-202ENST00000506023 RGS2P41220 211 aa12.67□□□□□ -0.38
BRIX1-202ENST00000506023 PLCD1P51178 756 aa12.67□□□□□ -0.38
BRIX1-202ENST00000506023 MAP2K5Q13163 448 aa12.67□□□□□ -0.38
BRIX1-202ENST00000506023 KIAA1755Q5JYT7 1200 aa12.67□□□□□ -0.38
BRIX1-202ENST00000506023 CRACR2BQ8N4Y2 399 aaPredicted RBP12.67□□□□□ -0.38
BRIX1-202ENST00000506023 FRAT1Q92837 279 aaPredicted RBP12.67□□□□□ -0.38
BRIX1-202ENST00000506023 ZNF512BQ96KM6 892 aaPredicted RBP12.67□□□□□ -0.38
BRIX1-202ENST00000506023 STXBP5LQ9Y2K9 1186 aa12.67□□□□□ -0.38
BRIX1-202ENST00000506023 A0A1W2PRG0 241 aa12.66□□□□□ -0.38
BRIX1-202ENST00000506023 SPDYE16A6NNV3 312 aaPredicted RBP12.66□□□□□ -0.38
BRIX1-202ENST00000506023 BAG3O95817 575 aa12.66□□□□□ -0.38
BRIX1-202ENST00000506023 CYP7A1P22680 504 aa12.66□□□□□ -0.38
BRIX1-202ENST00000506023 CYP2C19P33261 490 aa12.66□□□□□ -0.38
BRIX1-202ENST00000506023 ATP8B2P98198 1209 aa12.66□□□□□ -0.38
BRIX1-202ENST00000506023 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
BRIX1-202ENST00000506023 CATSPERGQ6ZRH7 1159 aa12.66□□□□□ -0.38
BRIX1-202ENST00000506023 RIOK1Q9BRS2 568 aaKnown RBP12.66□□□□□ -0.38
BRIX1-202ENST00000506023 GREB1LQ9C091 1923 aaPredicted RBP12.65□□□□□ -0.38
BRIX1-202ENST00000506023 POTEB2H3BUK9 544 aa12.65□□□□□ -0.38
BRIX1-202ENST00000506023 PLCG2P16885 1265 aa12.65□□□□□ -0.38
BRIX1-202ENST00000506023 PTPREP23469 700 aa12.65□□□□□ -0.38
BRIX1-202ENST00000506023 ATN1P54259 1190 aaPredicted RBP12.65□□□□□ -0.38
BRIX1-202ENST00000506023 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
BRIX1-202ENST00000506023 GRB14Q14449 540 aa12.65□□□□□ -0.38
BRIX1-202ENST00000506023 CLEC10AQ8IUN9 316 aa12.65□□□□□ -0.38
BRIX1-202ENST00000506023 MAGEB6Q8N7X4 407 aa12.65□□□□□ -0.38
BRIX1-202ENST00000506023 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
BRIX1-202ENST00000506023 COL25A1Q9BXS0 654 aaPredicted RBP12.65□□□□□ -0.38
BRIX1-202ENST00000506023 NOP58Q9Y2X3 529 aaKnown RBP12.65□□□□□ -0.38
BRIX1-202ENST00000506023 RABGAP1Q9Y3P9 1069 aa12.65□□□□□ -0.38
BRIX1-202ENST00000506023 MCM3APO60318 1980 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 USP17L15C9J2P7 530 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 USP17L13C9JLJ4 530 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 USP17L11C9JVI0 530 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 USP17L18D6R9N7 530 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 USP17L22D6RA61 530 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 USP17L17D6RBQ6 530 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 USP17L19D6RCP7 530 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 USP17L20D6RJB6 530 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 SURF6O75683 361 aaKnown RBP12.64□□□□□ -0.39
BRIX1-202ENST00000506023 IDH1O75874 414 aaKnown RBP12.64□□□□□ -0.39
BRIX1-202ENST00000506023 HOXC6P09630 235 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 CYBAP13498 195 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 GABPAQ06546 454 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 USP17L24Q0WX57 530 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 SLFNL1Q499Z3 407 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 CCDC158Q5M9N0 1113 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 ANO1Q5XXA6 986 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 LBX2Q6XYB7 198 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 EDC3Q96F86 508 aaKnown RBP12.64□□□□□ -0.39
BRIX1-202ENST00000506023 FAM161BQ96MY7 647 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 SENP6Q9GZR1 1112 aaPredicted RBP12.64□□□□□ -0.39
BRIX1-202ENST00000506023 KIAA1683Q9H0B3 1180 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 EHD4Q9H223 541 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 GINM1Q9NU53 330 aa12.64□□□□□ -0.39
BRIX1-202ENST00000506023 DDX20Q9UHI6 824 aaKnown RBP12.64□□□□□ -0.39
BRIX1-202ENST00000506023 CHGBP05060 677 aa12.63□□□□□ -0.39
BRIX1-202ENST00000506023 HLA-DOAP06340 250 aa12.63□□□□□ -0.39
BRIX1-202ENST00000506023 CYP2D6P10635 497 aa12.63□□□□□ -0.39
BRIX1-202ENST00000506023 SEPT2Q15019 361 aa12.63□□□□□ -0.39
BRIX1-202ENST00000506023 RAB3GAP1Q15042 981 aa12.63□□□□□ -0.39
BRIX1-202ENST00000506023 C9orf50Q5SZB4 431 aa12.63□□□□□ -0.39
BRIX1-202ENST00000506023 SLC44A5Q8NCS7 719 aa12.63□□□□□ -0.39
BRIX1-202ENST00000506023 RPAP3Q9H6T3 665 aaPredicted RBP12.63□□□□□ -0.39
BRIX1-202ENST00000506023 SERPINB13Q9UIV8 391 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms