RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 TGFB1P01137 390 aa8.98□□□□□ -0.97
NIPBL-205ENST00000505998 GBP1P32455 592 aa8.98□□□□□ -0.97
NIPBL-205ENST00000505998 ZNF746Q6NUN9 644 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-205ENST00000505998 ARHGAP27Q6ZUM4 889 aa8.98□□□□□ -0.97
NIPBL-205ENST00000505998 RBBP8NLQ8NC74 664 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-205ENST00000505998 KIF2CQ99661 725 aa8.98□□□□□ -0.97
NIPBL-205ENST00000505998 CNNM2Q9H8M5 875 aa8.98□□□□□ -0.97
NIPBL-205ENST00000505998 PRDM5Q9NQX1 630 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-205ENST00000505998 CEP131Q9UPN4 1083 aa8.98□□□□□ -0.97
NIPBL-205ENST00000505998 RGS13O14921 159 aa8.97□□□□□ -0.97
NIPBL-205ENST00000505998 SSBP05455 408 aaKnown RBP eCLIP8.97□□□□□ -0.97
NIPBL-205ENST00000505998 NME1P15531 152 aaKnown RBP8.97□□□□□ -0.97
NIPBL-205ENST00000505998 CYP7A1P22680 504 aa8.97□□□□□ -0.97
NIPBL-205ENST00000505998 ETV3P41162 512 aa8.97□□□□□ -0.97
NIPBL-205ENST00000505998 CHMP4BP1P59074 171 aa8.97□□□□□ -0.97
NIPBL-205ENST00000505998 BAHD1Q8TBE0 780 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-205ENST00000505998 GRIK1P39086 918 aa8.96□□□□□ -0.98
NIPBL-205ENST00000505998 LSRQ86X29 649 aaPredicted RBP8.96□□□□□ -0.98
NIPBL-205ENST00000505998 OR6P1Q8NGX9 317 aa8.96□□□□□ -0.98
NIPBL-205ENST00000505998 DNAJB8Q8NHS0 232 aa8.96□□□□□ -0.98
NIPBL-205ENST00000505998 GMLQ99445 158 aa8.96□□□□□ -0.98
NIPBL-205ENST00000505998 TM9SF2Q99805 663 aa8.96□□□□□ -0.98
NIPBL-205ENST00000505998 RNF112Q9ULX5 631 aa8.96□□□□□ -0.98
NIPBL-205ENST00000505998 MAPK8IP1Q9UQF2 711 aa8.96□□□□□ -0.98
NIPBL-205ENST00000505998 TNFRSF10CO14798 259 aa8.95□□□□□ -0.98
NIPBL-205ENST00000505998 FOSL1P15407 271 aa8.95□□□□□ -0.98
NIPBL-205ENST00000505998 GIPRP48546 466 aa8.95□□□□□ -0.98
NIPBL-205ENST00000505998 SFRP5Q5T4F7 317 aa8.95□□□□□ -0.98
NIPBL-205ENST00000505998 FAM214BQ7L5A3 538 aa8.95□□□□□ -0.98
NIPBL-205ENST00000505998 PPP1R13LQ8WUF5 828 aa8.95□□□□□ -0.98
NIPBL-205ENST00000505998 ANAPC16Q96DE5 110 aa8.95□□□□□ -0.98
NIPBL-205ENST00000505998 SHDQ96IW2 340 aa8.95□□□□□ -0.98
NIPBL-205ENST00000505998 HEXIM2Q96MH2 286 aaKnown RBP8.95□□□□□ -0.98
NIPBL-205ENST00000505998 UNC13AQ9UPW8 1703 aa8.94□□□□□ -0.98
NIPBL-205ENST00000505998 GNAT3A8MTJ3 354 aa8.94□□□□□ -0.98
NIPBL-205ENST00000505998 IGF2BP3O00425 579 aaKnown RBP eCLIP8.94□□□□□ -0.98
NIPBL-205ENST00000505998 FGRP09769 529 aa8.94□□□□□ -0.98
NIPBL-205ENST00000505998 POLR2BP30876 1174 aaKnown RBP8.94□□□□□ -0.98
NIPBL-205ENST00000505998 INTS3Q68E01 1043 aaKnown RBP8.94□□□□□ -0.98
NIPBL-205ENST00000505998 RUFY4Q6ZNE9 571 aa8.94□□□□□ -0.98
NIPBL-205ENST00000505998 FAM181AQ8N9Y4 354 aa8.94□□□□□ -0.98
NIPBL-205ENST00000505998 COX4I2Q96KJ9 171 aa8.94□□□□□ -0.98
NIPBL-205ENST00000505998 COBLO75128 1261 aa8.93□□□□□ -0.98
NIPBL-205ENST00000505998 GUCY2CP25092 1073 aa8.93□□□□□ -0.98
NIPBL-205ENST00000505998 CCNFP41002 786 aa8.93□□□□□ -0.98
NIPBL-205ENST00000505998 INTS5Q6P9B9 1019 aaKnown RBP8.93□□□□□ -0.98
NIPBL-205ENST00000505998 MCF2L2Q86YR7 1114 aa8.93□□□□□ -0.98
NIPBL-205ENST00000505998 TAB3Q8N5C8 712 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-205ENST00000505998 SLC9A7Q96T83 725 aa8.93□□□□□ -0.98
NIPBL-205ENST00000505998 MKNK2Q9HBH9 465 aa8.93□□□□□ -0.98
NIPBL-205ENST00000505998 MRVI1Q9Y6F6 885 aa8.93□□□□□ -0.98
NIPBL-205ENST00000505998 CNTNAP4Q9C0A0 1308 aa8.92□□□□□ -0.98
NIPBL-205ENST00000505998 UBOX5O94941 541 aa8.92□□□□□ -0.98
NIPBL-205ENST00000505998 HOXA10P31260 410 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-205ENST00000505998 TANGO6Q9C0B7 1094 aa8.92□□□□□ -0.98
NIPBL-205ENST00000505998 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.92□□□□□ -0.98
NIPBL-205ENST00000505998 FAM86C2PA6NEL3 165 aa8.91□□□□□ -0.98
NIPBL-205ENST00000505998 CBX7O95931 251 aa8.91□□□□□ -0.98
NIPBL-205ENST00000505998 ACRP10323 421 aa8.91□□□□□ -0.98
NIPBL-205ENST00000505998 ITIH2P19823 946 aa8.91□□□□□ -0.98
NIPBL-205ENST00000505998 OXCT1P55809 520 aa8.91□□□□□ -0.98
NIPBL-205ENST00000505998 KREMEN1Q96MU8 473 aa8.91□□□□□ -0.98
NIPBL-205ENST00000505998 ZC3H7BQ9UGR2 993 aaKnown RBP8.91□□□□□ -0.98
NIPBL-205ENST00000505998 CLEC3AO75596 197 aa8.9□□□□□ -0.98
NIPBL-205ENST00000505998 CEACAM5P06731 702 aa8.9□□□□□ -0.98
NIPBL-205ENST00000505998 KIR3DL1P43629 444 aa8.9□□□□□ -0.98
NIPBL-205ENST00000505998 PPP2R5EQ16537 467 aa8.9□□□□□ -0.98
NIPBL-205ENST00000505998 ZMYM1Q5SVZ6 1142 aa8.9□□□□□ -0.98
NIPBL-205ENST00000505998 C22orf34Q6ZV56 151 aa8.9□□□□□ -0.98
NIPBL-205ENST00000505998 MFSD4AQ8N468 514 aa8.9□□□□□ -0.98
NIPBL-205ENST00000505998 NETO1Q8TDF5 533 aa8.9□□□□□ -0.98
NIPBL-205ENST00000505998 RNF141Q8WVD5 230 aa8.9□□□□□ -0.98
NIPBL-205ENST00000505998 U3KQE9 123 aa8.9□□□□□ -0.98
NIPBL-205ENST00000505998 FAM155AB1AL88 458 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-205ENST00000505998 ZNF865P0CJ78 1059 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-205ENST00000505998 SSTR4P31391 388 aa8.89□□□□□ -0.99
NIPBL-205ENST00000505998 RNF4P78317 190 aa8.89□□□□□ -0.99
NIPBL-205ENST00000505998 UNC5AQ6ZN44 842 aa8.89□□□□□ -0.99
NIPBL-205ENST00000505998 PLD6Q8N2A8 252 aaKnown RBP8.89□□□□□ -0.99
NIPBL-205ENST00000505998 FAM169BQ8N8A8 192 aa8.89□□□□□ -0.99
NIPBL-205ENST00000505998 DHRS1Q96LJ7 313 aa8.89□□□□□ -0.99
NIPBL-205ENST00000505998 SLC6A18Q96N87 628 aa8.89□□□□□ -0.99
NIPBL-205ENST00000505998 ASPNQ9BXN1 380 aa8.89□□□□□ -0.99
NIPBL-205ENST00000505998 SLC12A7Q9Y666 1083 aa8.89□□□□□ -0.99
NIPBL-205ENST00000505998 PRR33A8MZF0 331 aa8.88□□□□□ -0.99
NIPBL-205ENST00000505998 ATP2B1P20020 1258 aa8.88□□□□□ -0.99
NIPBL-205ENST00000505998 ETFBP38117 255 aa8.88□□□□□ -0.99
NIPBL-205ENST00000505998 SF3A1Q15459 793 aaKnown RBP8.88□□□□□ -0.99
NIPBL-205ENST00000505998 ZYXQ15942 572 aaKnown RBP8.88□□□□□ -0.99
NIPBL-205ENST00000505998 IFI16Q16666 785 aaKnown RBP8.88□□□□□ -0.99
NIPBL-205ENST00000505998 TTC6Q86TZ1 520 aa8.88□□□□□ -0.99
NIPBL-205ENST00000505998 TMEM192Q8IY95 271 aa8.88□□□□□ -0.99
NIPBL-205ENST00000505998 C19orf47Q8N9M1 422 aaKnown RBP8.88□□□□□ -0.99
NIPBL-205ENST00000505998 ZNF408Q9H9D4 720 aa8.88□□□□□ -0.99
NIPBL-205ENST00000505998 A0A1W2PQH9 124 aa8.87□□□□□ -0.99
NIPBL-205ENST00000505998 MSMPQ1L6U9 139 aa8.87□□□□□ -0.99
NIPBL-205ENST00000505998 TNNI3KQ59H18 835 aa8.87□□□□□ -0.99
NIPBL-205ENST00000505998 FBXL18Q96ME1 805 aa8.87□□□□□ -0.99
NIPBL-205ENST00000505998 PRKAG3Q9UGI9 489 aa8.87□□□□□ -0.99
NIPBL-205ENST00000505998 KCNH3Q9ULD8 1083 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms