RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CEP131Q9UPN4 1083 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 CNTNAP4Q9C0A0 1308 aa6.4□□□□□ -1.39
TOPBP1-204ENST00000505804 FAM86C2PA6NEL3 165 aa6.39□□□□□ -1.39
TOPBP1-204ENST00000505804 RGS13O14921 159 aa6.39□□□□□ -1.39
TOPBP1-204ENST00000505804 ACRP10323 421 aa6.39□□□□□ -1.39
TOPBP1-204ENST00000505804 CYP27C1Q4G0S4 372 aa6.39□□□□□ -1.39
TOPBP1-204ENST00000505804 INTS3Q68E01 1043 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-204ENST00000505804 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
TOPBP1-204ENST00000505804 SLC51AQ86UW1 340 aa6.39□□□□□ -1.39
TOPBP1-204ENST00000505804 TM9SF2Q99805 663 aa6.39□□□□□ -1.39
TOPBP1-204ENST00000505804 OSBPL1AQ9BXW6 950 aa6.39□□□□□ -1.39
TOPBP1-204ENST00000505804 ZNF408Q9H9D4 720 aa6.39□□□□□ -1.39
TOPBP1-204ENST00000505804 TNFRSF10CO14798 259 aa6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 UBOX5O94941 541 aa6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 GUCY2CP25092 1073 aa6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 GTF2F1P35269 517 aaKnown RBP eCLIP6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 CYP27A1Q02318 531 aa6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 PPP2R5EQ16537 467 aa6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 ZDHHC13Q8IUH4 622 aa6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 OR6P1Q8NGX9 317 aa6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 DNAJB8Q8NHS0 232 aa6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 SREK1Q8WXA9 508 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 DHX38Q92620 1227 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 HEXIM2Q96MH2 286 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 TPX2Q9ULW0 747 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-204ENST00000505804 PRR19A6NJB7 356 aa6.37□□□□□ -1.39
TOPBP1-204ENST00000505804 SMAD7O15105 426 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-204ENST00000505804 ITGB7P26010 798 aa6.37□□□□□ -1.39
TOPBP1-204ENST00000505804 SF3A1Q15459 793 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-204ENST00000505804 ZYXQ15942 572 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-204ENST00000505804 UNC5AQ6ZN44 842 aa6.37□□□□□ -1.39
TOPBP1-204ENST00000505804 TTC6Q86TZ1 520 aa6.37□□□□□ -1.39
TOPBP1-204ENST00000505804 TNKS2Q9H2K2 1166 aa6.37□□□□□ -1.39
TOPBP1-204ENST00000505804 A0A1W2PQH9 124 aa6.36□□□□□ -1.39
TOPBP1-204ENST00000505804 TMEM192Q8IY95 271 aa6.36□□□□□ -1.39
TOPBP1-204ENST00000505804 TAB3Q8N5C8 712 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-204ENST00000505804 DRC1Q96MC2 740 aa6.36□□□□□ -1.39
TOPBP1-204ENST00000505804 METTL22Q9BUU2 404 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-204ENST00000505804 LRRC4CQ9HCJ2 640 aa6.36□□□□□ -1.39
TOPBP1-204ENST00000505804 PRDM5Q9NQX1 630 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-204ENST00000505804 LEMD3Q9Y2U8 911 aa6.36□□□□□ -1.39
TOPBP1-204ENST00000505804 COL17A1Q9UMD9 1497 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 LTBP3Q9NS15 1303 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 K7ELQ4 463 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 STK10O94804 968 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 TGFB1P01137 390 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 CYP7A1P22680 504 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 CCNFP41002 786 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 ETV3P41162 512 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 CASP7P55210 303 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 CHMP4BP1P59074 171 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 SFRP5Q5T4F7 317 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 ANKS3Q6ZW76 656 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 FAM181AQ8N9Y4 354 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 SLC6A18Q96N87 628 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 PIM2Q9P1W9 311 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 PRKAG3Q9UGI9 489 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 GTF2IRD1Q9UHL9 959 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 U3KQE9 123 aa6.35□□□□□ -1.39
TOPBP1-204ENST00000505804 PRR33A8MZF0 331 aa6.34□□□□□ -1.39
TOPBP1-204ENST00000505804 CYP26A1O43174 497 aa6.34□□□□□ -1.39
TOPBP1-204ENST00000505804 LRRN2O75325 713 aa6.34□□□□□ -1.39
TOPBP1-204ENST00000505804 CBX7O95931 251 aa6.34□□□□□ -1.39
TOPBP1-204ENST00000505804 HOXA10P31260 410 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-204ENST00000505804 ZNF746Q6NUN9 644 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-204ENST00000505804 C19orf47Q8N9M1 422 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-204ENST00000505804 VWCEQ96DN2 955 aa6.34□□□□□ -1.39
TOPBP1-204ENST00000505804 ZNF512BQ96KM6 892 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-204ENST00000505804 KREMEN1Q96MU8 473 aa6.34□□□□□ -1.39
TOPBP1-204ENST00000505804 IGF2BP3O00425 579 aaKnown RBP eCLIP6.33□□□□□ -1.4
TOPBP1-204ENST00000505804 CLEC3AO75596 197 aa6.33□□□□□ -1.4
TOPBP1-204ENST00000505804 OXCT1P55809 520 aa6.33□□□□□ -1.4
TOPBP1-204ENST00000505804 CPSF6Q16630 551 aaKnown RBP eCLIP6.33□□□□□ -1.4
TOPBP1-204ENST00000505804 ARHGAP27Q6ZUM4 889 aa6.33□□□□□ -1.4
TOPBP1-204ENST00000505804 HNRNPLLQ8WVV9 542 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-204ENST00000505804 DHRS1Q96LJ7 313 aa6.33□□□□□ -1.4
TOPBP1-204ENST00000505804 PCDHB10Q9UN67 800 aa6.33□□□□□ -1.4
TOPBP1-204ENST00000505804 MAPK8IP1Q9UQF2 711 aa6.33□□□□□ -1.4
TOPBP1-204ENST00000505804 ADAM23O75077 832 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 FOSL1P15407 271 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 ITIH2P19823 946 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 RBL2Q08999 1139 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 TNNI3KQ59H18 835 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 NBPF12Q5TAG4 269 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 RNF141Q8WVD5 230 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 Q96M66 194 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 FBXL18Q96ME1 805 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 FAM86C1Q9NVL1 165 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 ACTR10Q9NZ32 417 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 USP35Q9P2H5 1018 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 ZC3H7BQ9UGR2 993 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 ZNF214Q9UL59 606 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 R3HCC1Q9Y3T6 440 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 SLC12A7Q9Y666 1083 aa6.32□□□□□ -1.4
TOPBP1-204ENST00000505804 GNAT3A8MTJ3 354 aa6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 C9IYK1 514 aa6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 KLF4O43474 513 aa6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 TP53P04637 393 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-204ENST00000505804 PMS1P54277 932 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms