RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TNS1Q9HBL0 1735 aaKnown RBP19.88■□□□□ 0.77
TRAPPC11-204ENST00000505676 MYH6P13533 1939 aa19.88■□□□□ 0.77
TRAPPC11-204ENST00000505676 TSPY3P0CV98 308 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 TSPY8P0CW00 308 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 PFKFB1P16118 471 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 RCSD1Q6JBY9 416 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 DPP8Q6V1X1 898 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 BPIFA3Q9BQP9 254 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 KIAA1468Q9P260 1216 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 GOLGA6L19H0YKK7 550 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 ZNF500O60304 480 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 MMP10P09238 476 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 CALML3P27482 149 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 SYKP43405 635 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 TRAPPC10P48553 1259 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 FKBP1AP62942 108 aaKnown RBP19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 FAM47AQ5JRC9 791 aa19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 GPR101Q96P66 508 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC11-204ENST00000505676 FLT1P17948 1338 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 SMIM22K7EJ46 135 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 GRM4Q14833 912 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 CCDC34Q96HJ3 373 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 FAM13BQ9NYF5 915 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 KCNJ14Q9UNX9 436 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 V9GY48 417 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 MYO3BQ8WXR4 1341 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 WDHD1O75717 1129 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 SCG2P13521 617 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 PTPREP23469 700 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 RHBDL3P58872 404 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 GRIK5Q16478 980 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 PFKFB3Q16875 520 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 SARM1Q6SZW1 724 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 PNMA1Q8ND90 353 aa19.86■□□□□ 0.77
TRAPPC11-204ENST00000505676 C10orf71Q711Q0 1435 aa19.85■□□□□ 0.77
TRAPPC11-204ENST00000505676 PLEKHA8P1O95397 391 aa19.85■□□□□ 0.77
TRAPPC11-204ENST00000505676 GALNT17Q6IS24 598 aa19.85■□□□□ 0.77
TRAPPC11-204ENST00000505676 MRIQ9BWK5 157 aa19.85■□□□□ 0.77
TRAPPC11-204ENST00000505676 DNAJC25Q9H1X3 360 aa19.85■□□□□ 0.77
TRAPPC11-204ENST00000505676 FOCADQ5VW36 1801 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 SMARCA1P28370 1054 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 MARCKSP29966 332 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 PODNQ7Z5L7 613 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 MAPKAPK5Q8IW41 473 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 CCDC82Q8N4S0 544 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 NEDD1Q8NHV4 660 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 PLIN4Q96Q06 1357 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 TRIM75PA6NK02 468 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 CDC25BP30305 580 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 GTF2IP78347 998 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 PPP4R3BQ5MIZ7 849 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 LUZP1Q86V48 1076 aa19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 SRBD1Q8N5C6 995 aaKnown RBP19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 SRPRBQ9Y5M8 271 aaKnown RBP19.84■□□□□ 0.77
TRAPPC11-204ENST00000505676 CDK5RAP2Q96SN8 1893 aa19.83■□□□□ 0.77
TRAPPC11-204ENST00000505676 RASA1P20936 1047 aa19.83■□□□□ 0.77
TRAPPC11-204ENST00000505676 TOB1P50616 345 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC11-204ENST00000505676 KANK3Q6NY19 840 aa19.83■□□□□ 0.77
TRAPPC11-204ENST00000505676 SHC4Q6S5L8 630 aa19.83■□□□□ 0.77
TRAPPC11-204ENST00000505676 HHIPL2Q6UWX4 724 aa19.83■□□□□ 0.77
TRAPPC11-204ENST00000505676 IL17RBQ9NRM6 502 aa19.83■□□□□ 0.77
TRAPPC11-204ENST00000505676 DAGLAQ9Y4D2 1042 aa19.83■□□□□ 0.77
TRAPPC11-204ENST00000505676 BECN2A8MW95 431 aa19.83■□□□□ 0.76
TRAPPC11-204ENST00000505676 CDK8P49336 464 aa19.83■□□□□ 0.76
TRAPPC11-204ENST00000505676 IQCB1Q15051 598 aa19.83■□□□□ 0.76
TRAPPC11-204ENST00000505676 CC2D2BQ6DHV5 1058 aa19.83■□□□□ 0.76
TRAPPC11-204ENST00000505676 CMTR1Q8N1G2 835 aaKnown RBP19.83■□□□□ 0.76
TRAPPC11-204ENST00000505676 CCDC148Q8NFR7 591 aa19.83■□□□□ 0.76
TRAPPC11-204ENST00000505676 FERMT2Q96AC1 680 aa19.83■□□□□ 0.76
TRAPPC11-204ENST00000505676 VPS54Q9P1Q0 977 aa19.83■□□□□ 0.76
TRAPPC11-204ENST00000505676 COL11A2P13942 1736 aaPredicted RBP19.83■□□□□ 0.76
TRAPPC11-204ENST00000505676 G3V3G9 751 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 NOVP48745 357 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 GRIPAP1Q4V328 841 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 DCAF8Q5TAQ9 597 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 SWAP70Q9UH65 585 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 H0YIN7 160 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 UBE2Q2LH0YL09 131 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 NMT2O60551 498 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 NLRP12P59046 1061 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 TPM4P67936 248 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 KIAA2012Q0VF49 1180 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 CNKSR1Q969H4 720 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 DYNLL2Q96FJ2 89 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 PYM1Q9BRP8 204 aaKnown RBP19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 FBXO2Q9UK22 296 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 KCNH3Q9ULD8 1083 aa19.82■□□□□ 0.76
TRAPPC11-204ENST00000505676 PLCD1P51178 756 aa19.81■□□□□ 0.76
TRAPPC11-204ENST00000505676 HDLBPQ00341 1268 aaKnown RBP19.81■□□□□ 0.76
TRAPPC11-204ENST00000505676 SLC51AQ86UW1 340 aa19.81■□□□□ 0.76
TRAPPC11-204ENST00000505676 CABP5Q9NP86 173 aa19.81■□□□□ 0.76
TRAPPC11-204ENST00000505676 TUBE1Q9UJT0 475 aa19.81■□□□□ 0.76
TRAPPC11-204ENST00000505676 SNED1Q8TER0 1413 aa19.81■□□□□ 0.76
TRAPPC11-204ENST00000505676 NR5A1Q13285 461 aa19.8■□□□□ 0.76
TRAPPC11-204ENST00000505676 TNFRSF25Q93038 417 aa19.8■□□□□ 0.76
TRAPPC11-204ENST00000505676 SMTNL1A8MU46 457 aa19.8■□□□□ 0.76
TRAPPC11-204ENST00000505676 TOP1P11387 765 aaKnown RBP19.8■□□□□ 0.76
TRAPPC11-204ENST00000505676 NLRP5P59047 1200 aa19.8■□□□□ 0.76
TRAPPC11-204ENST00000505676 PLCB2Q00722 1185 aa19.8■□□□□ 0.76
TRAPPC11-204ENST00000505676 PLA2G4DQ86XP0 818 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms