RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SNTG2Q9NY99 539 aa5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 NOP58Q9Y2X3 529 aaKnown RBP5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 SAMM50Q9Y512 469 aa5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 METTL12A8MUP2 240 aa5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 NFICP08651 508 aa5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 CELA3AP09093 270 aa5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 EIF6P56537 245 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 PLEKHG4Q58EX7 1191 aa5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 HP1BP3Q5SSJ5 553 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 ZSWIM9Q86XI8 627 aa5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 DDX54Q8TDD1 881 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 GPATCH3Q96I76 525 aa5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 LRRC3Q9BY71 257 aa5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 CCDC113Q9H0I3 377 aa5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 METTL14Q9HCE5 456 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 VAV3Q9UKW4 847 aa5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 PRKAB1Q9Y478 270 aa5.5□□□□□ -1.53
TRAPPC13-208ENST00000505553 A0A096LPE4 126 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 A0A1W2PPZ6 126 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 ENC1O14682 589 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 DLGAP3O95886 979 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 CYP11A1P05108 521 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 CD8BP10966 210 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 TFE3P19532 575 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 RAB6AP20340 208 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 GRIA4P48058 902 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 ZNF165P49910 485 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 PPP2R3AQ06190 1150 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 PCDH1Q08174 1060 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 RASA3Q14644 834 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 KCNMB1Q16558 191 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 SEZ6Q53EL9 994 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 TAF7LQ5H9L4 462 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 OGFOD3Q6PK18 319 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 OR6P1Q8NGX9 317 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 NETO1Q8TDF5 533 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 SHDQ96IW2 340 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 CLEC4MQ9H2X3 399 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 SPC25Q9HBM1 224 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 ADAMTS6Q9UKP5 1117 aa5.49□□□□□ -1.53
TRAPPC13-208ENST00000505553 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 SMAD7O15105 426 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 DNAJC6O75061 913 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 IMPDH2P12268 514 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 MCM4P33991 863 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 CTSWP56202 376 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 IFRD2Q12894 506 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 MPP2Q14168 576 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 CWF19L2Q2TBE0 894 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 FILIP1Q7Z7B0 1213 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 FLAD1Q8NFF5 587 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 FERD3LQ96RJ6 166 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 MIR1-1HGQ9H1L0 117 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 RAD18Q9NS91 495 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 TMEM39AQ9NV64 488 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 GPN3Q9UHW5 284 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 CCDC85CA6NKD9 419 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 RAB11FIP3O75154 756 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 CDC45O75419 566 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 ADH5P11766 374 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 CRKP46108 304 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 PRKCQQ04759 706 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 POU4F3Q15319 338 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 SPRED3Q2MJR0 410 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 REXO1Q8N1G1 1221 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 SH3TC2Q8TF17 1288 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 GATAD2BQ8WXI9 593 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 APPBP2Q92624 585 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 SEMA6CQ9H3T2 930 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 ZNF576Q9H609 170 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 IFT57Q9NWB7 429 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 ACTR10Q9NZ32 417 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 CYP8B1Q9UNU6 501 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 MSRB2Q9Y3D2 182 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 ACTL7BQ9Y614 415 aa5.48□□□□□ -1.53
TRAPPC13-208ENST00000505553 FAM221BA6H8Z2 402 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 MARCH6O60337 910 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 BPNT1O95861 308 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 MAOBP27338 520 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 GIPRP48546 466 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 LRRC14Q15048 493 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 ZNF423Q2M1K9 1284 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 ARSHQ5FYA8 562 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 FBXW10Q5XX13 1052 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 CCDC81Q6ZN84 652 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 SYDE1Q6ZW31 735 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 AMIGO3Q86WK7 504 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 HOMER1Q86YM7 354 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 MICAL1Q8TDZ2 1067 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 CWC22Q9HCG8 908 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 PPT2Q9UMR5 302 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 COL4A3BPQ9Y5P4 624 aa5.47□□□□□ -1.53
TRAPPC13-208ENST00000505553 NFIBO00712 420 aa5.46□□□□□ -1.54
TRAPPC13-208ENST00000505553 TLR3O15455 904 aaKnown RBP5.46□□□□□ -1.54
TRAPPC13-208ENST00000505553 PDPK1O15530 556 aa5.46□□□□□ -1.54
TRAPPC13-208ENST00000505553 F13A1P00488 732 aa5.46□□□□□ -1.54
TRAPPC13-208ENST00000505553 INHBBP09529 407 aa5.46□□□□□ -1.54
TRAPPC13-208ENST00000505553 RASGRF1Q13972 1273 aa5.46□□□□□ -1.54
TRAPPC13-208ENST00000505553 FXNQ16595 210 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms