RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 FGAP02671 866 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 BCRP11274 1271 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 USP14P54578 494 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 SP3Q02447 781 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 PPARAQ07869 468 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 USP17L2Q6R6M4 530 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 CWC27Q6UX04 472 aaKnown RBP10.39□□□□□ -0.75
CTSB-205ENST00000505496 GADL1Q6ZQY3 521 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 CTU1Q7Z7A3 348 aaKnown RBP10.39□□□□□ -0.75
CTSB-205ENST00000505496 ACER1Q8TDN7 264 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 CCDC136Q96JN2 1154 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 ZNF287Q9HBT7 754 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 DIAPH3Q9NSV4 1193 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.39□□□□□ -0.756e-6■■□□□ 13.9
CTSB-205ENST00000505496 PLIN4Q96Q06 1357 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 RAD50Q92878 1312 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 CYP2C8P10632 490 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 CHMLP26374 656 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 CAP1Q01518 475 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 PABPC4Q13310 644 aaKnown RBP eCLIP10.38□□□□□ -0.75
CTSB-205ENST00000505496 DGKZQ13574 1117 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 DSCC1Q9BVC3 393 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 IL25Q9H293 177 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 KANSL2Q9H9L4 492 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 TMOD4Q9NZQ9 345 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 PNMA3Q9UL41 463 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 TACC3Q9Y6A5 838 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 LOC285556D6RIA3 1793 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 PTPRFP10586 1907 aa10.38□□□□□ -0.75
CTSB-205ENST00000505496 BAZ2AQ9UIF9 1905 aaKnown RBP10.38□□□□□ -0.75
CTSB-205ENST00000505496 MPHOSPH10O00566 681 aaKnown RBP10.37□□□□□ -0.75
CTSB-205ENST00000505496 ORC4O43929 436 aa10.37□□□□□ -0.75
CTSB-205ENST00000505496 SLC3A2P08195 630 aaKnown RBP10.37□□□□□ -0.75
CTSB-205ENST00000505496 LACTBP83111 547 aaPredicted RBP10.37□□□□□ -0.75
CTSB-205ENST00000505496 ICA1Q05084 483 aa10.37□□□□□ -0.75
CTSB-205ENST00000505496 PDE4BQ07343 736 aa10.37□□□□□ -0.75
CTSB-205ENST00000505496 PKN2Q16513 984 aaKnown RBP10.37□□□□□ -0.75
CTSB-205ENST00000505496 BMP2KLQ5H9B9 411 aa10.37□□□□□ -0.75
CTSB-205ENST00000505496 TNS4Q8IZW8 715 aa10.37□□□□□ -0.75
CTSB-205ENST00000505496 ERO1AQ96HE7 468 aa10.37□□□□□ -0.75
CTSB-205ENST00000505496 MCOLN1Q9GZU1 580 aa10.37□□□□□ -0.75
CTSB-205ENST00000505496 ASCC2Q9H1I8 757 aaPredicted RBP10.37□□□□□ -0.75
CTSB-205ENST00000505496 MKNK2Q9HBH9 465 aa10.37□□□□□ -0.75
CTSB-205ENST00000505496 SYNPO2Q9UMS6 1093 aa10.37□□□□□ -0.75
CTSB-205ENST00000505496 TMX2Q9Y320 296 aa10.37□□□□□ -0.75
CTSB-205ENST00000505496 ATAD5Q96QE3 1844 aa10.37□□□□□ -0.75
CTSB-205ENST00000505496 SGSM2O43147 1006 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 PRDM1O75626 825 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 EEF2P13639 858 aaKnown RBP10.36□□□□□ -0.75
CTSB-205ENST00000505496 VCAM1P19320 739 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 OSBPP22059 807 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 GCLCP48506 637 aaPredicted RBP10.36□□□□□ -0.75
CTSB-205ENST00000505496 NOVP48745 357 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 KIAA1755Q5JYT7 1200 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 CATSPERGQ6ZRH7 1159 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 OTOP1Q7RTM1 612 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 SKAP1Q86WV1 359 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 ZNF444Q8N0Y2 327 aaPredicted RBP10.36□□□□□ -0.75
CTSB-205ENST00000505496 NEDD1Q8NHV4 660 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 CD99L2Q8TCZ2 262 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 LPAR1Q92633 364 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 MKL1Q969V6 931 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 FEZ1Q99689 392 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 NBPF3Q9H094 633 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 SH2D4AQ9H788 454 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 ARHGEF10LQ9HCE6 1279 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 PPP4R2Q9NY27 417 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 NYAP2Q9P242 653 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 CPA4Q9UI42 421 aa10.36□□□□□ -0.75
CTSB-205ENST00000505496 CASP8AP2Q9UKL3 1982 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 GREB1LQ9C091 1923 aaPredicted RBP10.35□□□□□ -0.75
CTSB-205ENST00000505496 USP17L15C9J2P7 530 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 GNRH1P01148 92 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 PCP11498 1178 aaKnown RBP10.35□□□□□ -0.75
CTSB-205ENST00000505496 CTGFP29279 349 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 NT5C2P49902 561 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 CTDSPL2Q05D32 466 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 FAM110CQ1W6H9 321 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 POTEEQ6S8J3 1075 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 LBX2Q6XYB7 198 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 CLEC10AQ8IUN9 316 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 SMCR8Q8TEV9 937 aaPredicted RBP10.35□□□□□ -0.75
CTSB-205ENST00000505496 GTF3C2Q8WUA4 911 aaPredicted RBP10.35□□□□□ -0.75
CTSB-205ENST00000505496 STAG1Q8WVM7 1258 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 RUFY2Q8WXA3 655 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 P2RX7Q99572 595 aaKnown RBP10.35□□□□□ -0.75
CTSB-205ENST00000505496 VCPKMTQ9H867 229 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 INCENPQ9NQS7 918 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 MTMR4Q9NYA4 1195 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 MORF4L1Q9UBU8 362 aa10.35□□□□□ -0.75
CTSB-205ENST00000505496 HERVK_113P62684 666 aa10.34□□□□□ -0.75
CTSB-205ENST00000505496 IRX3P78415 501 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms