RNA–Protein interactions for RNA: ENST00000505353.1

SIL1-206, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-206ENST00000505353 SP3Q02447 781 aa11.29□□□□□ -0.6
SIL1-206ENST00000505353 TMEM179Q6ZVK1 233 aa11.29□□□□□ -0.6
SIL1-206ENST00000505353 CTU1Q7Z7A3 348 aaKnown RBP11.29□□□□□ -0.6
SIL1-206ENST00000505353 TNS4Q8IZW8 715 aa11.29□□□□□ -0.6
SIL1-206ENST00000505353 DDRGK1Q96HY6 314 aa11.29□□□□□ -0.6
SIL1-206ENST00000505353 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
SIL1-206ENST00000505353 MINDY4BA8MYZ0 360 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 APPP05067 770 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 PPARAQ07869 468 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 RAB3GAP1Q15042 981 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 GADL1Q6ZQY3 521 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 OTOP1Q7RTM1 612 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 CLEC10AQ8IUN9 316 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 NKX2-3Q8TAU0 364 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 MCOLN1Q9GZU1 580 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 NBPF3Q9H094 633 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 ASCC2Q9H1I8 757 aaPredicted RBP11.28□□□□□ -0.6
SIL1-206ENST00000505353 CABP5Q9NP86 173 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 INCENPQ9NQS7 918 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 CPA4Q9UI42 421 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 ZMYM6O95789 1325 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 CCDC171Q6TFL3 1326 aa11.28□□□□□ -0.6
SIL1-206ENST00000505353 RLFQ13129 1914 aa11.27□□□□□ -0.6
SIL1-206ENST00000505353 DOCK3Q8IZD9 2030 aa11.27□□□□□ -0.61
SIL1-206ENST00000505353 CHMLP26374 656 aa11.27□□□□□ -0.61
SIL1-206ENST00000505353 NOVP48745 357 aa11.27□□□□□ -0.61
SIL1-206ENST00000505353 TDO2P48775 406 aa11.27□□□□□ -0.61
SIL1-206ENST00000505353 LACTBP83111 547 aaPredicted RBP11.27□□□□□ -0.61
SIL1-206ENST00000505353 USP17L2Q6R6M4 530 aa11.27□□□□□ -0.61
SIL1-206ENST00000505353 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.61
SIL1-206ENST00000505353 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.61
SIL1-206ENST00000505353 PARK7Q99497 189 aaKnown RBP11.27□□□□□ -0.61
SIL1-206ENST00000505353 NACAP1Q9BZK3 213 aa11.27□□□□□ -0.61
SIL1-206ENST00000505353 ARHGAP39Q9C0H5 1083 aa11.27□□□□□ -0.61
SIL1-206ENST00000505353 NAPBQ9H115 298 aa11.27□□□□□ -0.61
SIL1-206ENST00000505353 MYH8P13535 1937 aa11.27□□□□□ -0.61
SIL1-206ENST00000505353 ZSWIM8A7E2V4 1837 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 HIP1O00291 1037 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 EEF2P13639 858 aaKnown RBP11.26□□□□□ -0.61
SIL1-206ENST00000505353 VCAM1P19320 739 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 PKN2Q16513 984 aaKnown RBP11.26□□□□□ -0.61
SIL1-206ENST00000505353 CATSPERGQ6ZRH7 1159 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 AMOTL1Q8IY63 956 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 MKL1Q969V6 931 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 ABHD8Q96I13 439 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 P2RX7Q99572 595 aaKnown RBP11.26□□□□□ -0.61
SIL1-206ENST00000505353 KANSL2Q9H9L4 492 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 TXNRD2Q9NNW7 524 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 RBPJLQ9UBG7 517 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 PLIN4Q96Q06 1357 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 CENPFP49454 3210 aa11.26□□□□□ -0.61
SIL1-206ENST00000505353 ORC4O43929 436 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 PEX10O60683 326 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 PRDM1O75626 825 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 CTDSPL2Q05D32 466 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 ERICH6BQ5W0A0 696 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 STK11IPQ8N1F8 1099 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 ERO1AQ96HE7 468 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 DSCC1Q9BVC3 393 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 VCPKMTQ9H867 229 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 IL17RBQ9NRM6 502 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 MTMR4Q9NYA4 1195 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 TMOD4Q9NZQ9 345 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 NYAP2Q9P242 653 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 MORF4L1Q9UBU8 362 aa11.25□□□□□ -0.61
SIL1-206ENST00000505353 MPHOSPH10O00566 681 aaKnown RBP11.24□□□□□ -0.61
SIL1-206ENST00000505353 CNMDO75829 334 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 USP14P54578 494 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 ICA1Q05084 483 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 ZYXQ15942 572 aaKnown RBP11.24□□□□□ -0.61
SIL1-206ENST00000505353 FAM110CQ1W6H9 321 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 Q3C1V9 767 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 FBXO46Q6PJ61 603 aaPredicted RBP11.24□□□□□ -0.61
SIL1-206ENST00000505353 CEP95Q96GE4 821 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 TRIM47Q96LD4 638 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 MKNK2Q9HBH9 465 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 DIAPH3Q9NSV4 1193 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 PTPN22Q9Y2R2 807 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 TRIM17Q9Y577 477 aa11.24□□□□□ -0.61
SIL1-206ENST00000505353 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 SGSM2O43147 1006 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 OSBPP22059 807 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 GCLCP48506 637 aaPredicted RBP11.23□□□□□ -0.61
SIL1-206ENST00000505353 HERVK_113P62684 666 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 TFAP4Q01664 338 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 PTH1RQ03431 593 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 PDE4BQ07343 736 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
SIL1-206ENST00000505353 PABPC4Q13310 644 aaKnown RBP eCLIP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms