RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ZNF569Q5MCW4 686 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 RASGRP2Q7LDG7 609 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 FANCBQ8NB91 859 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 SHANK3Q9BYB0 1731 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 MFAP3LO75121 409 aa13.52□□□□□ -0.24
UBE3D-206ENST00000505226 PRDM1O75626 825 aa13.52□□□□□ -0.24
UBE3D-206ENST00000505226 DEXIO95424 95 aa13.52□□□□□ -0.24
UBE3D-206ENST00000505226 WTAPQ15007 396 aa13.52□□□□□ -0.24
UBE3D-206ENST00000505226 TRIM22Q8IYM9 498 aa13.52□□□□□ -0.24
UBE3D-206ENST00000505226 VPS54Q9P1Q0 977 aa13.52□□□□□ -0.24
UBE3D-206ENST00000505226 CDC23Q9UJX2 597 aa13.52□□□□□ -0.24
UBE3D-206ENST00000505226 PKN1Q16512 942 aa13.52□□□□□ -0.24
UBE3D-206ENST00000505226 STAG1Q8WVM7 1258 aa13.52□□□□□ -0.24
UBE3D-206ENST00000505226 SYMPKQ92797 1274 aaKnown RBP13.52□□□□□ -0.24
UBE3D-206ENST00000505226 PDE11AQ9HCR9 933 aa13.52□□□□□ -0.24
UBE3D-206ENST00000505226 LCMT1Q9UIC8 334 aa13.52□□□□□ -0.24
UBE3D-206ENST00000505226 TOGARAM1Q9Y4F4 1720 aa13.52□□□□□ -0.25
UBE3D-206ENST00000505226 ERVK-24P63145 666 aa13.52□□□□□ -0.25
UBE3D-206ENST00000505226 MCM6Q14566 821 aa13.52□□□□□ -0.25
UBE3D-206ENST00000505226 SLC35F6Q8N357 371 aa13.52□□□□□ -0.25
UBE3D-206ENST00000505226 TXLNBQ8N3L3 684 aa13.52□□□□□ -0.25
UBE3D-206ENST00000505226 PIGBQ92521 554 aa13.52□□□□□ -0.25
UBE3D-206ENST00000505226 SYNRGQ9UMZ2 1314 aa13.52□□□□□ -0.25
UBE3D-206ENST00000505226 VGLL3A8MV65 326 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 BRD3Q15059 726 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 ZNF654Q8IZM8 581 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 MIGA1Q8NAN2 632 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 KRT23Q9C075 422 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 CNNM2Q9H8M5 875 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 ABCB6Q9NP58 842 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 AATFQ9NY61 560 aaKnown RBP eCLIP13.51□□□□□ -0.25
UBE3D-206ENST00000505226 RAB21Q9UL25 225 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 IL2RBP14784 551 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 CCT6AP40227 531 aaKnown RBP13.51□□□□□ -0.25
UBE3D-206ENST00000505226 MUM1L1Q5H9M0 696 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 KANK3Q6NY19 840 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 PPFIBP1Q86W92 1011 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 SLC4A9Q96Q91 983 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 TIAM2Q8IVF5 1701 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 ARHGAP25P42331 645 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 PUM3Q15397 648 aaKnown RBP13.51□□□□□ -0.25
UBE3D-206ENST00000505226 ZSCAN26Q16670 478 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 LPIN2Q92539 896 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 PRDM11Q9NQV5 511 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 FEZ2Q9UHY8 353 aaPredicted RBP13.51□□□□□ -0.25
UBE3D-206ENST00000505226 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
UBE3D-206ENST00000505226 L1RE1Q9UN81 338 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
UBE3D-206ENST00000505226 MYH8P13535 1937 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 KIF5CO60282 957 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 UQCRFS1P1P0C7P4 283 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 USP5P45974 858 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 ADGRA1Q86SQ6 560 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 MSANTD4Q8NCY6 345 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 HNRNPLLQ8WVV9 542 aaKnown RBP13.5□□□□□ -0.25
UBE3D-206ENST00000505226 TMOD3Q9NYL9 352 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 ADAMTS3O15072 1205 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 RHOXF2BP0C7M4 288 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 TDO2P48775 406 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 VSNL1P62760 191 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 FUT2Q10981 343 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 MTRQ99707 1265 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 RHOXF2Q9BQY4 288 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 BLZF1Q9H2G9 400 aa13.5□□□□□ -0.25
UBE3D-206ENST00000505226 FECHP22830 423 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 LMAN1P49257 510 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 MAP3K12Q12852 859 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 SEC23AQ15436 765 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 KIF4BQ2VIQ3 1234 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 NAA15Q9BXJ9 866 aaKnown RBP13.49□□□□□ -0.25
UBE3D-206ENST00000505226 MYH3P11055 1940 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.49□□□□□ -0.25
UBE3D-206ENST00000505226 TRIM75PA6NK02 468 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 BCAMP50895 628 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 NPY5RQ15761 445 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 JAKMIP3Q5VZ66 844 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 NOA1Q8NC60 698 aaKnown RBP13.49□□□□□ -0.25
UBE3D-206ENST00000505226 EXOC4Q96A65 974 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 CTNND2Q9UQB3 1225 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 SLIT2O94813 1529 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 COL5A2P05997 1499 aaPredicted RBP13.49□□□□□ -0.25
UBE3D-206ENST00000505226 DOCK2Q92608 1830 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 XDHP47989 1333 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 PLEKHA8P1O95397 391 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 KRT31Q15323 416 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 ZNF174Q15697 407 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 SDR42E1Q8WUS8 393 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 PHF20Q9BVI0 1012 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 TRIM10Q9UDY6 481 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 CEP131Q9UPN4 1083 aa13.49□□□□□ -0.25
UBE3D-206ENST00000505226 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
UBE3D-206ENST00000505226 MAPK8IP2Q13387 824 aaPredicted RBP13.48□□□□□ -0.25
UBE3D-206ENST00000505226 VPS18Q9P253 973 aa13.48□□□□□ -0.25
UBE3D-206ENST00000505226 MYH6P13533 1939 aa13.48□□□□□ -0.25
UBE3D-206ENST00000505226 CTAGE9A4FU28 777 aa13.48□□□□□ -0.25
UBE3D-206ENST00000505226 PDE8AO60658 829 aa13.48□□□□□ -0.25
UBE3D-206ENST00000505226 CEP112Q8N8E3 955 aa13.48□□□□□ -0.25
UBE3D-206ENST00000505226 VPS16Q9H269 839 aa13.48□□□□□ -0.25
UBE3D-206ENST00000505226 TNKSO95271 1327 aa13.48□□□□□ -0.25
UBE3D-206ENST00000505226 TRIM66O15016 1216 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms