RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 GMCL1Q96IK5 515 aa9.84□□□□□ -0.83
CDC42SE2-208ENST00000505065 INPP5BP32019 993 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 KIAA1755Q5JYT7 1200 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 ARMC9Q7Z3E5 817 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 MAF1Q9H063 256 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 LY9Q9HBG7 655 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 MYPNQ86TC9 1320 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 A0A1W2PRG0 241 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 SH2B2O14492 632 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 ZNF213O14771 459 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 CELF2O95319 508 aaKnown RBP9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 ASNSP08243 561 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 HSPA6P17066 643 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 KRT32Q14532 448 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 PPP4R3BQ5MIZ7 849 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 ZSWIM5Q9P217 1185 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 GHRHRQ02643 423 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 CCDC178Q5BJE1 867 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 RGS22Q8NE09 1264 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 ZNF287Q9HBT7 754 aa9.83□□□□□ -0.84
CDC42SE2-208ENST00000505065 TDO2P48775 406 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 SCAF8Q9UPN6 1271 aaKnown RBP9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 SMARCA1P28370 1054 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 PDE4BQ07343 736 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 CERKLQ49MI3 558 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 REPS2Q8NFH8 660 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 WDR81Q562E7 1941 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 SMCHD1A6NHR9 2005 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 HMGB1P09429 215 aaKnown RBP9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 RPS6KB1P23443 525 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 PRAMEF18Q5VWM3 479 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 RGMBQ6NW40 437 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 CLMNQ96JQ2 1002 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 INCENPQ9NQS7 918 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 TOB2Q14106 344 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 ANKRD23Q86SG2 305 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 ENAHQ8N8S7 591 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 TMEM87BQ96K49 555 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
CDC42SE2-208ENST00000505065 C19orf81C9J6K1 198 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 PPP1R12BO60237 982 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 ABCB5Q2M3G0 1257 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 RUFY3Q7L099 469 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 C2orf69Q8N8R5 385 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 ZNF526Q8TF50 670 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 KANSL2Q9H9L4 492 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 SAGE1Q9NXZ1 904 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 USP17L5A8MUK1 530 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 FUT2Q10981 343 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 MOB2Q70IA6 237 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 WRNIP1Q96S55 665 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 ATP2A1O14983 1001 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 POLR3DP05423 398 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 SLC3A2P08195 630 aaKnown RBP9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 MFSD6Q6ZSS7 791 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 ZKSCAN4Q969J2 545 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 DDRGK1Q96HY6 314 aa9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 ZSCAN10Q96SZ4 725 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE2-208ENST00000505065 NF2P35240 595 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 BACE1P56817 501 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 NCOA7Q8NI08 942 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 CEP95Q96GE4 821 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 MAP2K2P36507 400 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 TROAPQ12815 778 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 LPAR1Q92633 364 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 CCDC102AQ96A19 550 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 PTPN18Q99952 460 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 HPS5Q9UPZ3 1129 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 FAM196BA6NMK8 535 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 SLC35G1Q2M3R5 365 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 MIGA2Q7L4E1 593 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 DHX32Q7L7V1 743 aaKnown RBP9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 ZNF280CQ8ND82 737 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 ESR2Q92731 530 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 FAM217BQ9NTX9 383 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 FZD1Q9UP38 647 aa9.8□□□□□ -0.84
CDC42SE2-208ENST00000505065 TTLL1O95922 423 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 RNF20Q5VTR2 975 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 OPTNQ96CV9 577 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 ANO2Q9NQ90 1003 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 PALM3A6NDB9 673 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 GH2P01242 217 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 INHBEP58166 350 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 AMOTL1Q8IY63 956 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 ANGEL1Q9UNK9 670 aaKnown RBP9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 CNMDO75829 334 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 DCAF4Q8WV16 495 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 NEK1Q96PY6 1258 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 VCPKMTQ9H867 229 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 UBE2Q2LH0YL09 131 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 DDAH1O94760 285 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 ST3GAL1Q11201 340 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 SEPT2Q15019 361 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 TEX2Q8IWB9 1127 aa9.79□□□□□ -0.84
CDC42SE2-208ENST00000505065 GRM4Q14833 912 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 USP17L2Q6R6M4 530 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 AGTPBP1Q9UPW5 1226 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 TOP1P11387 765 aaKnown RBP9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 EEF2P13639 858 aaKnown RBP9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 GTF2A2P52657 109 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 498.9 ms