RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 HEXIM2Q96MH2 286 aaKnown RBP5□□□□□ -1.61
RFC1-209ENST00000504974 DUSP23Q9BVJ7 150 aa5□□□□□ -1.61
RFC1-209ENST00000504974 SRRTQ9BXP5 876 aaKnown RBP5□□□□□ -1.61
RFC1-209ENST00000504974 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
RFC1-209ENST00000504974 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
RFC1-209ENST00000504974 ANTXR1Q9H6X2 564 aa5□□□□□ -1.61
RFC1-209ENST00000504974 FBRSQ9HAH7 460 aa5□□□□□ -1.61
RFC1-209ENST00000504974 PAK6Q9NQU5 681 aaPredicted RBP5□□□□□ -1.61
RFC1-209ENST00000504974 FAM86C2PA6NEL3 165 aa4.99□□□□□ -1.61
RFC1-209ENST00000504974 FGRP09769 529 aa4.99□□□□□ -1.61
RFC1-209ENST00000504974 RING1Q06587 406 aa4.99□□□□□ -1.61
RFC1-209ENST00000504974 NKG7Q16617 165 aa4.99□□□□□ -1.61
RFC1-209ENST00000504974 HID1Q8IV36 788 aa4.99□□□□□ -1.61
RFC1-209ENST00000504974 BCL7CQ8WUZ0 217 aaPredicted RBP4.99□□□□□ -1.61
RFC1-209ENST00000504974 DRC1Q96MC2 740 aa4.99□□□□□ -1.61
RFC1-209ENST00000504974 KRTAP4-12Q9BQ66 201 aa4.99□□□□□ -1.61
RFC1-209ENST00000504974 EHMT1Q9H9B1 1298 aa4.99□□□□□ -1.61
RFC1-209ENST00000504974 BSDC1Q9NW68 430 aaPredicted RBP4.99□□□□□ -1.61
RFC1-209ENST00000504974 PCOLCE2Q9UKZ9 415 aa4.99□□□□□ -1.61
RFC1-209ENST00000504974 ZNRF3Q9ULT6 936 aa4.99□□□□□ -1.61
RFC1-209ENST00000504974 PLAGL2Q9UPG8 496 aa4.99□□□□□ -1.61
RFC1-209ENST00000504974 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 UPK3BL1B0FP48 263 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 UPK3BL2E5RIL1 263 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 STK10O94804 968 aaKnown RBP4.98□□□□□ -1.61
RFC1-209ENST00000504974 PRNPP04156 253 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 IMPDH2P12268 514 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 YARSP54577 528 aaKnown RBP4.98□□□□□ -1.61
RFC1-209ENST00000504974 PPP2R5EQ16537 467 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 ARSHQ5FYA8 562 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 OVOS1Q6IE37 1185 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 PHACTR4Q8IZ21 702 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 KCT2Q8NC54 265 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 ACSF2Q96CM8 615 aaPredicted RBP4.98□□□□□ -1.61
RFC1-209ENST00000504974 TMEM87BQ96K49 555 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 GMLQ99445 158 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 PRDM7Q9NQW5 492 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 GMIPQ9P107 970 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 TJP2Q9UDY2 1190 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 ADAM30Q9UKF2 790 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 STRIP2Q9ULQ0 834 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 TACC3Q9Y6A5 838 aa4.98□□□□□ -1.61
RFC1-209ENST00000504974 CHURC1-FNTBB4DL54 471 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 DNAJA2O60884 412 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 ATE1O95260 518 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 CD8BP10966 210 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 RAG1P15918 1043 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 ETFBP38117 255 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 OXCT1P55809 520 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 CHMP4BP1P59074 171 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 CYP27A1Q02318 531 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 CYP27C1Q4G0S4 372 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 PRAMEF13Q5VWM6 474 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 RUFY4Q6ZNE9 571 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 ARMCX6Q7L4S7 300 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 FAM214BQ7L5A3 538 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 VSIG10LQ86VR7 867 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 LSRQ86X29 649 aaPredicted RBP4.97□□□□□ -1.61
RFC1-209ENST00000504974 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 RIN3Q8TB24 985 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 TMEM40Q8WWA1 233 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 DNAJC2Q99543 621 aaKnown RBP4.97□□□□□ -1.61
RFC1-209ENST00000504974 ZNF408Q9H9D4 720 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 ADAMTS6Q9UKP5 1117 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 R3HCC1Q9Y3T6 440 aaKnown RBP4.97□□□□□ -1.61
RFC1-209ENST00000504974 PRR36Q9H6K5 1346 aa4.97□□□□□ -1.61
RFC1-209ENST00000504974 SLC22A31A6NKX4 558 aa4.96□□□□□ -1.62
RFC1-209ENST00000504974 IGSF3O75054 1194 aa4.96□□□□□ -1.62
RFC1-209ENST00000504974 SLBPQ14493 270 aaKnown RBP eCLIP4.96□□□□□ -1.62
RFC1-209ENST00000504974 CPSF6Q16630 551 aaKnown RBP eCLIP4.96□□□□□ -1.62
RFC1-209ENST00000504974 LRRFIP1Q32MZ4 808 aaKnown RBP4.96□□□□□ -1.62
RFC1-209ENST00000504974 TMEM201Q5SNT2 666 aa4.96□□□□□ -1.62
RFC1-209ENST00000504974 SLC6A19Q695T7 634 aa4.96□□□□□ -1.62
RFC1-209ENST00000504974 MCATQ8IVS2 390 aaKnown RBP4.96□□□□□ -1.62
RFC1-209ENST00000504974 MRPL41Q8IXM3 137 aaKnown RBP4.96□□□□□ -1.62
RFC1-209ENST00000504974 PMFBP1Q8TBY8 1022 aa4.96□□□□□ -1.62
RFC1-209ENST00000504974 ATG4CQ96DT6 458 aa4.96□□□□□ -1.62
RFC1-209ENST00000504974 SHDQ96IW2 340 aa4.96□□□□□ -1.62
RFC1-209ENST00000504974 MIPEPQ99797 713 aa4.96□□□□□ -1.62
RFC1-209ENST00000504974 FOXQ1Q9C009 403 aa4.96□□□□□ -1.62
RFC1-209ENST00000504974 PRR33A8MZF0 331 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 SMAD7O15105 426 aaKnown RBP4.95□□□□□ -1.62
RFC1-209ENST00000504974 LRIG2O94898 1065 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 SLITRK5O94991 958 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 POLR2BP30876 1174 aaKnown RBP4.95□□□□□ -1.62
RFC1-209ENST00000504974 GBP1P32455 592 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 GIPRP48546 466 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 PLCL1Q15111 1095 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 AOC3Q16853 763 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 CBLL1Q75N03 491 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 NLRC3Q7RTR2 1065 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 CKAP2LQ8IYA6 745 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 FAM169BQ8N8A8 192 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 NETO1Q8TDF5 533 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 UBXN4Q92575 508 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 KIF2CQ99661 725 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 PRDM10Q9NQV6 1147 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 SLC5A6Q9Y289 635 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 RNF114Q9Y508 228 aa4.95□□□□□ -1.62
RFC1-209ENST00000504974 ABCC9O60706 1549 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms