RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 USP17L12C9JPN9 530 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 USP17L21D6R901 530 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 CXCL11O14625 94 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 INPP5BP32019 993 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 SREBF2Q12772 1141 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 SKOR2Q2VWA4 1001 aaPredicted RBP11.97□□□□□ -0.49
USP17L28-201ENST00000504543 CTR9Q6PD62 1173 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 IFNL3Q8IZI9 196 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 CLMNQ96JQ2 1002 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 CCDC17Q96LX7 622 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 CFHR5Q9BXR6 569 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 TRIM34Q9BYJ4 488 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 DNAJC18Q9H819 358 aa11.97□□□□□ -0.49
USP17L28-201ENST00000504543 PLCD1P51178 756 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 GTF2A2P52657 109 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 COL9A3Q14050 684 aaPredicted RBP11.96□□□□□ -0.49
USP17L28-201ENST00000504543 Q6ZUG5 572 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 C16orf86Q6ZW13 317 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 MB21D2Q8IYB1 491 aaPredicted RBP11.96□□□□□ -0.49
USP17L28-201ENST00000504543 GTF3C6Q969F1 213 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 ZKSCAN4Q969J2 545 aaPredicted RBP11.96□□□□□ -0.49
USP17L28-201ENST00000504543 CHMP4CQ96CF2 233 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 OPTNQ96CV9 577 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 WDR18Q9BV38 432 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 ZNF287Q9HBT7 754 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 PICK1Q9NRD5 415 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 WBP1LQ9NX94 342 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 SAGE1Q9NXZ1 904 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 SAP30BPQ9UHR5 308 aaKnown RBP11.96□□□□□ -0.49
USP17L28-201ENST00000504543 ANAPC4Q9UJX5 808 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 FZD1Q9UP38 647 aa11.96□□□□□ -0.49
USP17L28-201ENST00000504543 ZNF213O14771 459 aa11.96□□□□□ -0.5
USP17L28-201ENST00000504543 ALDH1A1P00352 501 aa11.96□□□□□ -0.5
USP17L28-201ENST00000504543 PCP11498 1178 aaKnown RBP11.96□□□□□ -0.5
USP17L28-201ENST00000504543 PTPRAP18433 802 aa11.96□□□□□ -0.5
USP17L28-201ENST00000504543 SHMT1P34896 483 aa11.96□□□□□ -0.5
USP17L28-201ENST00000504543 EVCP57679 992 aa11.96□□□□□ -0.5
USP17L28-201ENST00000504543 KIF23Q02241 960 aaPredicted RBP11.96□□□□□ -0.5
USP17L28-201ENST00000504543 PAXIP1Q6ZW49 1069 aaPredicted RBP11.96□□□□□ -0.5
USP17L28-201ENST00000504543 NCOA7Q8NI08 942 aa11.96□□□□□ -0.5
USP17L28-201ENST00000504543 MS4A4AQ96JQ5 239 aa11.96□□□□□ -0.5
USP17L28-201ENST00000504543 ELP3Q9H9T3 547 aa11.96□□□□□ -0.5
USP17L28-201ENST00000504543 EPB41L4AQ9HCS5 686 aaPredicted RBP11.96□□□□□ -0.5
USP17L28-201ENST00000504543 ATAD5Q96QE3 1844 aa11.96□□□□□ -0.5
USP17L28-201ENST00000504543 PHIPQ8WWQ0 1821 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 FGRP09769 529 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 PDCP20941 246 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 GJB2P29033 226 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 MCM5P33992 734 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 GJA5P36382 358 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 SNAPC2Q13487 334 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 NOM1Q5C9Z4 860 aaKnown RBP11.95□□□□□ -0.5
USP17L28-201ENST00000504543 TCEANC2Q96MN5 208 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 LLPHQ9BRT6 129 aaKnown RBP11.95□□□□□ -0.5
USP17L28-201ENST00000504543 NAPBQ9H115 298 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 AS3MTQ9HBK9 375 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 AFG3L2Q9Y4W6 797 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 MYH6P13533 1939 aa11.95□□□□□ -0.5
USP17L28-201ENST00000504543 MYH8P13535 1937 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 USP17L5A8MUK1 530 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 STX6O43752 255 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 TRAK2O60296 914 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 PFKFB2O60825 505 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 AOC2O75106 756 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 APPP05067 770 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 SLC3A2P08195 630 aaKnown RBP11.94□□□□□ -0.5
USP17L28-201ENST00000504543 CETPP11597 493 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 HOXD11P31277 338 aaPredicted RBP11.94□□□□□ -0.5
USP17L28-201ENST00000504543 TDO2P48775 406 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 GSE1Q14687 1217 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 CERKLQ49MI3 558 aaPredicted RBP11.94□□□□□ -0.5
USP17L28-201ENST00000504543 OTUD7BQ6GQQ9 843 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 RALYLQ86SE5 291 aaKnown RBP11.94□□□□□ -0.5
USP17L28-201ENST00000504543 BRF1Q92994 677 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 ZNF274Q96GC6 653 aaPredicted RBP11.94□□□□□ -0.5
USP17L28-201ENST00000504543 NBPF3Q9H094 633 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 CABP5Q9NP86 173 aa11.94□□□□□ -0.5
USP17L28-201ENST00000504543 IRF6O14896 467 aa11.93□□□□□ -0.5
USP17L28-201ENST00000504543 ZSCAN22P10073 491 aaPredicted RBP11.93□□□□□ -0.5
USP17L28-201ENST00000504543 SYT1P21579 422 aa11.93□□□□□ -0.5
USP17L28-201ENST00000504543 CDK8P49336 464 aa11.93□□□□□ -0.5
USP17L28-201ENST00000504543 FGD1P98174 961 aa11.93□□□□□ -0.5
USP17L28-201ENST00000504543 TRDNQ13061 729 aa11.93□□□□□ -0.5
USP17L28-201ENST00000504543 RRP1BQ14684 758 aaKnown RBP11.93□□□□□ -0.5
USP17L28-201ENST00000504543 SH3D19Q5HYK7 790 aa11.93□□□□□ -0.5
USP17L28-201ENST00000504543 LARP6Q9BRS8 491 aaKnown RBP11.93□□□□□ -0.5
USP17L28-201ENST00000504543 ZBTB21Q9ULJ3 1066 aa11.93□□□□□ -0.5
USP17L28-201ENST00000504543 SLC45A1Q9Y2W3 748 aa11.93□□□□□ -0.5
USP17L28-201ENST00000504543 ATP6V1DQ9Y5K8 247 aa11.93□□□□□ -0.5
USP17L28-201ENST00000504543 PTPRFP10586 1907 aa11.93□□□□□ -0.5
USP17L28-201ENST00000504543 A0A0G2JLL6 359 aaPredicted RBP11.92□□□□□ -0.5
USP17L28-201ENST00000504543 FAM196BA6NMK8 535 aa11.92□□□□□ -0.5
USP17L28-201ENST00000504543 C19orf81C9J6K1 198 aa11.92□□□□□ -0.5
USP17L28-201ENST00000504543 CYP2D6P10635 497 aa11.92□□□□□ -0.5
USP17L28-201ENST00000504543 HAND2P61296 217 aa11.92□□□□□ -0.5
USP17L28-201ENST00000504543 PDE4BQ07343 736 aa11.92□□□□□ -0.5
USP17L28-201ENST00000504543 PPARAQ07869 468 aa11.92□□□□□ -0.5
USP17L28-201ENST00000504543 ABCB5Q2M3G0 1257 aa11.92□□□□□ -0.5
USP17L28-201ENST00000504543 TMEM179Q6ZVK1 233 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms