RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 PSMC4P43686 418 aa25.34■■□□□ 1.65
TRAPPC11-203ENST00000504526 TDO2P48775 406 aa25.34■■□□□ 1.65
TRAPPC11-203ENST00000504526 IRX3P78415 501 aaPredicted RBP25.34■■□□□ 1.65
TRAPPC11-203ENST00000504526 ARHGAP39Q9C0H5 1083 aa25.34■■□□□ 1.65
TRAPPC11-203ENST00000504526 EMILIN3Q9NT22 766 aa25.34■■□□□ 1.65
TRAPPC11-203ENST00000504526 FCGRTP55899 365 aa25.33■■□□□ 1.65
TRAPPC11-203ENST00000504526 SEPT2Q15019 361 aa25.33■■□□□ 1.65
TRAPPC11-203ENST00000504526 FAM110CQ1W6H9 321 aa25.33■■□□□ 1.65
TRAPPC11-203ENST00000504526 PLEKHM2Q8IWE5 1019 aa25.33■■□□□ 1.65
TRAPPC11-203ENST00000504526 SEC62Q99442 399 aaKnown RBP25.33■■□□□ 1.65
TRAPPC11-203ENST00000504526 FMNL1O95466 1100 aaPredicted RBP25.32■■□□□ 1.64
TRAPPC11-203ENST00000504526 TRIM6-TRIM34B2RNG4 842 aa25.31■■□□□ 1.64
TRAPPC11-203ENST00000504526 IFNL3Q8IZI9 196 aa25.31■■□□□ 1.64
TRAPPC11-203ENST00000504526 ANKRD13CQ8N6S4 541 aa25.31■■□□□ 1.64
TRAPPC11-203ENST00000504526 ACER1Q8TDN7 264 aa25.31■■□□□ 1.64
TRAPPC11-203ENST00000504526 TRIM47Q96LD4 638 aa25.31■■□□□ 1.64
TRAPPC11-203ENST00000504526 ZNF287Q9HBT7 754 aa25.31■■□□□ 1.64
TRAPPC11-203ENST00000504526 EPB41L4AQ9HCS5 686 aaPredicted RBP25.31■■□□□ 1.64
TRAPPC11-203ENST00000504526 HELLSQ9NRZ9 838 aa25.31■■□□□ 1.64
TRAPPC11-203ENST00000504526 ROBO3Q96MS0 1386 aa25.31■■□□□ 1.64
TRAPPC11-203ENST00000504526 MINDY4BA8MYZ0 360 aa25.3■■□□□ 1.64
TRAPPC11-203ENST00000504526 AKR1B1P15121 316 aa25.3■■□□□ 1.64
TRAPPC11-203ENST00000504526 ZYXQ15942 572 aaKnown RBP25.3■■□□□ 1.64
TRAPPC11-203ENST00000504526 GTF3C2Q8WUA4 911 aaPredicted RBP25.3■■□□□ 1.64
TRAPPC11-203ENST00000504526 SH2D4AQ9H788 454 aa25.3■■□□□ 1.64
TRAPPC11-203ENST00000504526 SMIM22K7EJ46 135 aa25.29■■□□□ 1.64
TRAPPC11-203ENST00000504526 CTGFP29279 349 aa25.29■■□□□ 1.64
TRAPPC11-203ENST00000504526 RILPL2Q969X0 211 aa25.29■■□□□ 1.64
TRAPPC11-203ENST00000504526 ARHGEF10LQ9HCE6 1279 aa25.29■■□□□ 1.64
TRAPPC11-203ENST00000504526 SRRDQ9UH36 339 aa25.29■■□□□ 1.64
TRAPPC11-203ENST00000504526 PTCH2Q9Y6C5 1203 aa25.29■■□□□ 1.64
TRAPPC11-203ENST00000504526 MYH8P13535 1937 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 USP17L15C9J2P7 530 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 USP17L13C9JLJ4 530 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 USP17L11C9JVI0 530 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 USP17L18D6R9N7 530 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 USP17L22D6RA61 530 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 USP17L17D6RBQ6 530 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 USP17L19D6RCP7 530 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 USP17L20D6RJB6 530 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 RGS19P49795 217 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 ICA1Q05084 483 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 USP17L24Q0WX57 530 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 NBPF11Q86T75 865 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 ARMC5Q96C12 935 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 P2RX7Q99572 595 aaKnown RBP25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 NAPBQ9H115 298 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 MKNK2Q9HBH9 465 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 MORF4L1Q9UBU8 362 aa25.28■■□□□ 1.64
TRAPPC11-203ENST00000504526 HERVK_113P62684 666 aa25.27■■□□□ 1.64
TRAPPC11-203ENST00000504526 KANSL2Q9H9L4 492 aa25.27■■□□□ 1.64
TRAPPC11-203ENST00000504526 ECM2O94769 699 aaPredicted RBP25.26■■□□□ 1.63
TRAPPC11-203ENST00000504526 SLC3A2P08195 630 aaKnown RBP25.26■■□□□ 1.63
TRAPPC11-203ENST00000504526 VCAM1P19320 739 aa25.26■■□□□ 1.63
TRAPPC11-203ENST00000504526 SLC9C1Q4G0N8 1177 aa25.26■■□□□ 1.63
TRAPPC11-203ENST00000504526 MCMDC2Q4G0Z9 681 aa25.26■■□□□ 1.63
TRAPPC11-203ENST00000504526 MYPNQ86TC9 1320 aa25.26■■□□□ 1.63
TRAPPC11-203ENST00000504526 A0A1W2PRG0 241 aa25.25■■□□□ 1.63
TRAPPC11-203ENST00000504526 TNPO2O14787 897 aaKnown RBP25.25■■□□□ 1.63
TRAPPC11-203ENST00000504526 RASA1P20936 1047 aa25.25■■□□□ 1.63
TRAPPC11-203ENST00000504526 CATSPERGQ6ZRH7 1159 aa25.25■■□□□ 1.63
TRAPPC11-203ENST00000504526 CCDC129Q6ZRS4 1044 aa25.25■■□□□ 1.63
TRAPPC11-203ENST00000504526 LPAR1Q92633 364 aa25.25■■□□□ 1.63
TRAPPC11-203ENST00000504526 TMX2Q9Y320 296 aa25.25■■□□□ 1.63
TRAPPC11-203ENST00000504526 ZSWIM8A7E2V4 1837 aa25.25■■□□□ 1.63
TRAPPC11-203ENST00000504526 RAET1EQ8TD07 263 aa25.24■■□□□ 1.63
TRAPPC11-203ENST00000504526 COA7Q96BR5 231 aa25.24■■□□□ 1.63
TRAPPC11-203ENST00000504526 A0A0D9SFI3 127 aa25.23■■□□□ 1.63
TRAPPC11-203ENST00000504526 MFAP1P55081 439 aaKnown RBP25.23■■□□□ 1.63
TRAPPC11-203ENST00000504526 SOX10P56693 466 aa25.23■■□□□ 1.63
TRAPPC11-203ENST00000504526 PDE4BQ07343 736 aa25.23■■□□□ 1.63
TRAPPC11-203ENST00000504526 PPARAQ07869 468 aa25.23■■□□□ 1.63
TRAPPC11-203ENST00000504526 SIAH1Q8IUQ4 282 aa25.23■■□□□ 1.63
TRAPPC11-203ENST00000504526 ZNF444Q8N0Y2 327 aaPredicted RBP25.23■■□□□ 1.63
TRAPPC11-203ENST00000504526 GPRC5AQ8NFJ5 357 aa25.23■■□□□ 1.63
TRAPPC11-203ENST00000504526 FAM227BQ96M60 508 aa25.23■■□□□ 1.63
TRAPPC11-203ENST00000504526 RPAP3Q9H6T3 665 aaPredicted RBP25.23■■□□□ 1.63
TRAPPC11-203ENST00000504526 HIP1O00291 1037 aa25.22■■□□□ 1.63
TRAPPC11-203ENST00000504526 SDSP20132 328 aa25.22■■□□□ 1.63
TRAPPC11-203ENST00000504526 PRKCZQ05513 592 aa25.22■■□□□ 1.63
TRAPPC11-203ENST00000504526 NMIQ13287 307 aaPredicted RBP25.22■■□□□ 1.63
TRAPPC11-203ENST00000504526 ALX1Q15699 326 aa25.22■■□□□ 1.63
TRAPPC11-203ENST00000504526 VCPKMTQ9H867 229 aa25.22■■□□□ 1.63
TRAPPC11-203ENST00000504526 FOXP2O15409 715 aa25.21■■□□□ 1.63
TRAPPC11-203ENST00000504526 EEF2P13639 858 aaKnown RBP25.21■■□□□ 1.63
TRAPPC11-203ENST00000504526 LBX2Q6XYB7 198 aa25.21■■□□□ 1.63
TRAPPC11-203ENST00000504526 CLEC10AQ8IUN9 316 aa25.21■■□□□ 1.63
TRAPPC11-203ENST00000504526 STK11IPQ8N1F8 1099 aa25.21■■□□□ 1.63
TRAPPC11-203ENST00000504526 ZNF333Q96JL9 665 aa25.21■■□□□ 1.63
TRAPPC11-203ENST00000504526 RBPJLQ9UBG7 517 aa25.21■■□□□ 1.63
TRAPPC11-203ENST00000504526 RABGAP1Q9Y3P9 1069 aa25.21■■□□□ 1.63
TRAPPC11-203ENST00000504526 MGAMO43451 1857 aa25.21■■□□□ 1.63
TRAPPC11-203ENST00000504526 IRF5Q13568 498 aa25.2■■□□□ 1.62
TRAPPC11-203ENST00000504526 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.2■■□□□ 1.62
TRAPPC11-203ENST00000504526 CCDC171Q6TFL3 1326 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 PDE4AP27815 886 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 GRK4P32298 578 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 ERVK-9P63128 1117 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 ERVK-24P63145 666 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 ATP2B2Q01814 1243 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms