RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 NAV1Q8NEY1 1877 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 MYO5AQ9Y4I1 1855 aaKnown RBP9.28□□□□□ -0.92
SKP2-203ENST00000504386 MYH1P12882 1939 aa9.27□□□□□ -0.93
SKP2-203ENST00000504386 M0R2C6 588 aa9.27□□□□□ -0.93
SKP2-203ENST00000504386 HMGCS2P54868 508 aa9.27□□□□□ -0.93
SKP2-203ENST00000504386 ICA1Q05084 483 aa9.27□□□□□ -0.93
SKP2-203ENST00000504386 MTMR2Q13614 643 aa9.27□□□□□ -0.93
SKP2-203ENST00000504386 SLC4A8Q2Y0W8 1093 aa9.27□□□□□ -0.93
SKP2-203ENST00000504386 FAM43AQ8N2R8 423 aa9.27□□□□□ -0.93
SKP2-203ENST00000504386 ZNF296Q8WUU4 475 aaPredicted RBP9.27□□□□□ -0.93
SKP2-203ENST00000504386 C12orf42Q96LP6 360 aa9.27□□□□□ -0.93
SKP2-203ENST00000504386 PTPN18Q99952 460 aa9.27□□□□□ -0.93
SKP2-203ENST00000504386 TSKSQ9UJT2 592 aa9.27□□□□□ -0.93
SKP2-203ENST00000504386 HOXA7P31268 230 aaPredicted RBP9.26□□□□□ -0.93
SKP2-203ENST00000504386 PPARAQ07869 468 aa9.26□□□□□ -0.93
SKP2-203ENST00000504386 NMIQ13287 307 aaPredicted RBP9.26□□□□□ -0.93
SKP2-203ENST00000504386 CCDC178Q5BJE1 867 aa9.26□□□□□ -0.93
SKP2-203ENST00000504386 SP7Q8TDD2 431 aaPredicted RBP9.26□□□□□ -0.93
SKP2-203ENST00000504386 GOPCQ9HD26 462 aa9.26□□□□□ -0.93
SKP2-203ENST00000504386 CDK5RAP2Q96SN8 1893 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 DDX60LQ5H9U9 1706 aaKnown RBP9.25□□□□□ -0.93
SKP2-203ENST00000504386 USP17L15C9J2P7 530 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 USP17L13C9JLJ4 530 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 USP17L11C9JVI0 530 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 USP17L18D6R9N7 530 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 USP17L22D6RA61 530 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 USP17L17D6RBQ6 530 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 USP17L19D6RCP7 530 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 USP17L20D6RJB6 530 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 TSPY3P0CV98 308 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 TSPY8P0CW00 308 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 CYP2D6P10635 497 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 HSPD1P10809 573 aaKnown RBP9.25□□□□□ -0.93
SKP2-203ENST00000504386 FCGRTP55899 365 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 CCNA1P78396 465 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 USP17L24Q0WX57 530 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 DGKZQ13574 1117 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 SEPT2Q15019 361 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 FAM110CQ1W6H9 321 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 SLFNL1Q499Z3 407 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 BMP2KLQ5H9B9 411 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 COL13A1Q5TAT6 717 aaPredicted RBP9.25□□□□□ -0.93
SKP2-203ENST00000504386 CWC27Q6UX04 472 aaKnown RBP9.25□□□□□ -0.93
SKP2-203ENST00000504386 KIAA1211Q6ZU35 1233 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 CCAR1Q8IX12 1150 aaKnown RBP9.25□□□□□ -0.93
SKP2-203ENST00000504386 DSCC1Q9BVC3 393 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 EFCC1Q9HA90 598 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 ANAPC4Q9UJX5 808 aa9.25□□□□□ -0.93
SKP2-203ENST00000504386 A0A0D9SFI3 127 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 TSPY2A6NKD2 308 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 ZNF213O14771 459 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 WDR46O15213 610 aaKnown RBP9.24□□□□□ -0.93
SKP2-203ENST00000504386 ORC4O43929 436 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 EIF5BO60841 1220 aaKnown RBP9.24□□□□□ -0.93
SKP2-203ENST00000504386 LACTBP83111 547 aaPredicted RBP9.24□□□□□ -0.93
SKP2-203ENST00000504386 MOGSQ13724 837 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 IMMTQ16891 758 aaKnown RBP9.24□□□□□ -0.93
SKP2-203ENST00000504386 GPAT2Q6NUI2 795 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 FBXO46Q6PJ61 603 aaPredicted RBP9.24□□□□□ -0.93
SKP2-203ENST00000504386 C17orf99Q6UX52 265 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 MB21D1Q8N884 522 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 DYNLL2Q96FJ2 89 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 FAM227BQ96M60 508 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 SEC62Q99442 399 aaKnown RBP9.24□□□□□ -0.93
SKP2-203ENST00000504386 CNNM2Q9H8M5 875 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 EPB41L4AQ9HCS5 686 aaPredicted RBP9.24□□□□□ -0.93
SKP2-203ENST00000504386 PPP4R2Q9NY27 417 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 HOXC10Q9NYD6 342 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 NYAP2Q9P242 653 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 TMX2Q9Y320 296 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 MYPNQ86TC9 1320 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 PLIN4Q96Q06 1357 aa9.24□□□□□ -0.93
SKP2-203ENST00000504386 TTLL1O95922 423 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 CHGBP05060 677 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 AKR1B1P15121 316 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 RASA1P20936 1047 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 PDE4AP27815 886 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 RRP1BQ14684 758 aaKnown RBP9.23□□□□□ -0.93
SKP2-203ENST00000504386 CCDC129Q6ZRS4 1044 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 MFSD6Q6ZSS7 791 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 NBPF11Q86T75 865 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 SLC44A5Q8NCS7 719 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 NEDD1Q8NHV4 660 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 COA7Q96BR5 231 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 ASCC2Q9H1I8 757 aaPredicted RBP9.23□□□□□ -0.93
SKP2-203ENST00000504386 VCPKMTQ9H867 229 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 TOMM22Q9NS69 142 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 TRIM17Q9Y577 477 aa9.23□□□□□ -0.93
SKP2-203ENST00000504386 SIPA1L1O43166 1804 aa9.22□□□□□ -0.93
SKP2-203ENST00000504386 CYP2D7A0A087X1C5 515 aa9.22□□□□□ -0.93
SKP2-203ENST00000504386 RANBP6O60518 1105 aaKnown RBP9.22□□□□□ -0.93
SKP2-203ENST00000504386 FMNL1O95466 1100 aaPredicted RBP9.22□□□□□ -0.93
SKP2-203ENST00000504386 FGAP02671 866 aa9.22□□□□□ -0.93
SKP2-203ENST00000504386 SLURP2P0DP57 97 aa9.22□□□□□ -0.93
SKP2-203ENST00000504386 FDX1P10109 184 aa9.22□□□□□ -0.93
SKP2-203ENST00000504386 CYP2C8P10632 490 aa9.22□□□□□ -0.93
SKP2-203ENST00000504386 BCRP11274 1271 aa9.22□□□□□ -0.93
SKP2-203ENST00000504386 GSPT1P15170 499 aaKnown RBP9.22□□□□□ -0.93
SKP2-203ENST00000504386 VCAM1P19320 739 aa9.22□□□□□ -0.93
SKP2-203ENST00000504386 CHMLP26374 656 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms