RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 ZNF446Q9NWS9 450 aa12.9□□□□□ -0.35
PAPD4-207ENST00000504233 USP17L12C9JPN9 530 aa12.89□□□□□ -0.35
PAPD4-207ENST00000504233 USP17L21D6R901 530 aa12.89□□□□□ -0.35
PAPD4-207ENST00000504233 COBLO75128 1261 aa12.89□□□□□ -0.35
PAPD4-207ENST00000504233 TOP1P11387 765 aaKnown RBP12.89□□□□□ -0.35
PAPD4-207ENST00000504233 PTF1AQ7RTS3 328 aa12.89□□□□□ -0.35
PAPD4-207ENST00000504233 RIOK1Q9BRS2 568 aaKnown RBP12.89□□□□□ -0.35
PAPD4-207ENST00000504233 FOXP1Q9H334 677 aaPredicted RBP12.89□□□□□ -0.35
PAPD4-207ENST00000504233 GNL3LQ9NVN8 582 aaKnown RBP12.89□□□□□ -0.35
PAPD4-207ENST00000504233 NFE2L3Q9Y4A8 694 aa12.89□□□□□ -0.35
PAPD4-207ENST00000504233 DOCK2Q92608 1830 aa12.89□□□□□ -0.35
PAPD4-207ENST00000504233 FAM237AA0A1B0GTK4 181 aa12.89□□□□□ -0.35
PAPD4-207ENST00000504233 CYP2D6P10635 497 aa12.89□□□□□ -0.35
PAPD4-207ENST00000504233 MDM2Q00987 491 aaPredicted RBP12.89□□□□□ -0.35
PAPD4-207ENST00000504233 SECISBP2LQ93073 1101 aaKnown RBP12.89□□□□□ -0.35
PAPD4-207ENST00000504233 SMARCE1Q969G3 411 aa12.89□□□□□ -0.35
PAPD4-207ENST00000504233 ZSCAN10Q96SZ4 725 aaPredicted RBP12.89□□□□□ -0.35
PAPD4-207ENST00000504233 AATFQ9NY61 560 aaKnown RBP eCLIP12.89□□□□□ -0.35
PAPD4-207ENST00000504233 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
PAPD4-207ENST00000504233 COL14A1Q05707 1796 aaKnown RBP12.89□□□□□ -0.35
PAPD4-207ENST00000504233 ARAP2Q8WZ64 1704 aa12.88□□□□□ -0.35
PAPD4-207ENST00000504233 A0A087X0B3 334 aa12.88□□□□□ -0.35
PAPD4-207ENST00000504233 STX17P56962 302 aa12.88□□□□□ -0.35
PAPD4-207ENST00000504233 ZNF174Q15697 407 aa12.88□□□□□ -0.35
PAPD4-207ENST00000504233 CAVIN4Q5BKX8 364 aa12.88□□□□□ -0.35
PAPD4-207ENST00000504233 FAM84BQ96KN1 310 aaPredicted RBP12.88□□□□□ -0.35
PAPD4-207ENST00000504233 SAMSN1Q9NSI8 373 aaKnown RBP12.88□□□□□ -0.35
PAPD4-207ENST00000504233 MTMR7Q9Y216 660 aa12.88□□□□□ -0.35
PAPD4-207ENST00000504233 NRDCO43847 1150 aa12.88□□□□□ -0.35
PAPD4-207ENST00000504233 PKN1Q16512 942 aa12.88□□□□□ -0.35
PAPD4-207ENST00000504233 SMYD4Q8IYR2 804 aaPredicted RBP12.88□□□□□ -0.35
PAPD4-207ENST00000504233 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
PAPD4-207ENST00000504233 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
PAPD4-207ENST00000504233 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
PAPD4-207ENST00000504233 DNAI1Q9UI46 699 aa12.88□□□□□ -0.35
PAPD4-207ENST00000504233 VEGFAP15692 232 aaPredicted RBP12.87□□□□□ -0.35
PAPD4-207ENST00000504233 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
PAPD4-207ENST00000504233 CATIPQ7Z7H3 387 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 RABEP2Q9H5N1 569 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 ZNF652Q9Y2D9 606 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 TRIM75PA6NK02 468 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 CBFA2T2O43439 604 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 E2F4Q16254 413 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 TBC1D9BQ66K14 1250 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 VSTM4Q8IW00 320 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 COL16A1Q07092 1604 aaPredicted RBP12.87□□□□□ -0.35
PAPD4-207ENST00000504233 CICQ96RK0 1608 aaPredicted RBP12.87□□□□□ -0.35
PAPD4-207ENST00000504233 ADAMTS3O15072 1205 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 PRDX5P30044 214 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 PPARDQ03181 441 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 CTR9Q6PD62 1173 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 MED15Q96RN5 788 aa12.87□□□□□ -0.35
PAPD4-207ENST00000504233 FEZ2Q9UHY8 353 aaPredicted RBP12.87□□□□□ -0.35
PAPD4-207ENST00000504233 HOOK1Q9UJC3 728 aaKnown RBP12.87□□□□□ -0.35
PAPD4-207ENST00000504233 SRPRBQ9Y5M8 271 aaKnown RBP12.87□□□□□ -0.35
PAPD4-207ENST00000504233 ZNF804BA4D1E1 1349 aa12.86□□□□□ -0.35
PAPD4-207ENST00000504233 ACTN4O43707 911 aaKnown RBP12.86□□□□□ -0.35
PAPD4-207ENST00000504233 ARHGAP29Q52LW3 1261 aa12.86□□□□□ -0.35
PAPD4-207ENST00000504233 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
PAPD4-207ENST00000504233 TIAM2Q8IVF5 1701 aa12.86□□□□□ -0.35
PAPD4-207ENST00000504233 BCL9LQ86UU0 1499 aa12.86□□□□□ -0.35
PAPD4-207ENST00000504233 SLU7O95391 586 aaKnown RBP12.86□□□□□ -0.35
PAPD4-207ENST00000504233 KRT2P35908 639 aa12.86□□□□□ -0.35
PAPD4-207ENST00000504233 MECOMQ03112 1051 aa12.86□□□□□ -0.35
PAPD4-207ENST00000504233 FAM98CQ17RN3 349 aaKnown RBP12.86□□□□□ -0.35
PAPD4-207ENST00000504233 SYMPKQ92797 1274 aaKnown RBP12.86□□□□□ -0.35
PAPD4-207ENST00000504233 RNF26Q9BY78 433 aaPredicted RBP12.86□□□□□ -0.35
PAPD4-207ENST00000504233 MYH6P13533 1939 aa12.86□□□□□ -0.35
PAPD4-207ENST00000504233 RTL9Q8NET4 1388 aa12.86□□□□□ -0.35
PAPD4-207ENST00000504233 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
PAPD4-207ENST00000504233 VWA3AA6NCI4 1184 aa12.85□□□□□ -0.35
PAPD4-207ENST00000504233 PHACTR2O75167 634 aa12.85□□□□□ -0.35
PAPD4-207ENST00000504233 FAM182BQ5T319 152 aa12.85□□□□□ -0.35
PAPD4-207ENST00000504233 BCORQ6W2J9 1755 aa12.85□□□□□ -0.35
PAPD4-207ENST00000504233 FUT2Q10981 343 aa12.85□□□□□ -0.35
PAPD4-207ENST00000504233 UBE4AQ14139 1066 aa12.85□□□□□ -0.35
PAPD4-207ENST00000504233 TXNRD3Q86VQ6 643 aa12.85□□□□□ -0.35
PAPD4-207ENST00000504233 DRC1Q96MC2 740 aa12.85□□□□□ -0.35
PAPD4-207ENST00000504233 BSDC1Q9NW68 430 aaPredicted RBP12.85□□□□□ -0.35
PAPD4-207ENST00000504233 PSDA5PKW4 1024 aaPredicted RBP12.84□□□□□ -0.35
PAPD4-207ENST00000504233 XBP1P17861 261 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 GABPB1Q06547 395 aaPredicted RBP12.84□□□□□ -0.35
PAPD4-207ENST00000504233 TROAPQ12815 778 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 MORC3Q14149 939 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 SRBD1Q8N5C6 995 aaKnown RBP12.84□□□□□ -0.35
PAPD4-207ENST00000504233 RGS22Q8NE09 1264 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 CEP131Q9UPN4 1083 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 NID2Q14112 1375 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 ROBO1Q9Y6N7 1651 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 FANCGO15287 622 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 LMAN1P49257 510 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 CREBRFQ8IUR6 639 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 ZNF397Q8NF99 534 aaPredicted RBP12.84□□□□□ -0.35
PAPD4-207ENST00000504233 CPLX3Q8WVH0 158 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 DESI2Q9BSY9 194 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 PHF20Q9BVI0 1012 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 BLZF1Q9H2G9 400 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 CALCOCO1Q9P1Z2 691 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 ANAPC4Q9UJX5 808 aa12.84□□□□□ -0.35
PAPD4-207ENST00000504233 MYH13Q9UKX3 1938 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms