RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 SRRDQ9UH36 339 aa21.42■■□□□ 1.02
NFKB1-204ENST00000504044 GSG1L2A8MUP6 293 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 USP17L15C9J2P7 530 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 USP17L13C9JLJ4 530 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 USP17L11C9JVI0 530 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 USP17L18D6R9N7 530 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 USP17L22D6RA61 530 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 USP17L17D6RBQ6 530 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 USP17L19D6RCP7 530 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 USP17L20D6RJB6 530 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 TNPO2O14787 897 aaKnown RBP21.41■■□□□ 1.02
NFKB1-204ENST00000504044 USP17L24Q0WX57 530 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 SEPT2Q15019 361 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 ZYXQ15942 572 aaKnown RBP21.41■■□□□ 1.02
NFKB1-204ENST00000504044 COA7Q96BR5 231 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 ARHGAP39Q9C0H5 1083 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 NAPBQ9H115 298 aa21.41■■□□□ 1.02
NFKB1-204ENST00000504044 DDX60LQ5H9U9 1706 aaKnown RBP21.41■■□□□ 1.02
NFKB1-204ENST00000504044 MINDY4BA8MYZ0 360 aa21.4■■□□□ 1.02
NFKB1-204ENST00000504044 M0R2C6 588 aa21.4■■□□□ 1.02
NFKB1-204ENST00000504044 ICA1Q05084 483 aa21.4■■□□□ 1.02
NFKB1-204ENST00000504044 SHROOM1Q2M3G4 852 aaPredicted RBP21.4■■□□□ 1.02
NFKB1-204ENST00000504044 CCAR1Q8IX12 1150 aaKnown RBP21.4■■□□□ 1.02
NFKB1-204ENST00000504044 SLC44A5Q8NCS7 719 aa21.4■■□□□ 1.02
NFKB1-204ENST00000504044 TRIM47Q96LD4 638 aa21.4■■□□□ 1.02
NFKB1-204ENST00000504044 HELLSQ9NRZ9 838 aa21.4■■□□□ 1.02
NFKB1-204ENST00000504044 EMILIN3Q9NT22 766 aa21.4■■□□□ 1.02
NFKB1-204ENST00000504044 PTCH2Q9Y6C5 1203 aa21.4■■□□□ 1.02
NFKB1-204ENST00000504044 ATAD5Q96QE3 1844 aa21.39■■□□□ 1.02
NFKB1-204ENST00000504044 MYPNQ86TC9 1320 aa21.39■■□□□ 1.01
NFKB1-204ENST00000504044 MFAP1P55081 439 aaKnown RBP21.39■■□□□ 1.01
NFKB1-204ENST00000504044 IFNL3Q8IZI9 196 aa21.39■■□□□ 1.01
NFKB1-204ENST00000504044 RILPL2Q969X0 211 aa21.39■■□□□ 1.01
NFKB1-204ENST00000504044 ARMC5Q96C12 935 aa21.39■■□□□ 1.01
NFKB1-204ENST00000504044 TMEM106CQ9BVX2 250 aa21.39■■□□□ 1.01
NFKB1-204ENST00000504044 OSBPL3Q9H4L5 887 aa21.39■■□□□ 1.01
NFKB1-204ENST00000504044 KANSL2Q9H9L4 492 aa21.39■■□□□ 1.01
NFKB1-204ENST00000504044 PHIPQ8WWQ0 1821 aa21.39■■□□□ 1.01
NFKB1-204ENST00000504044 MYH7P12883 1935 aa21.38■■□□□ 1.01
NFKB1-204ENST00000504044 CYP2D7A0A087X1C5 515 aa21.38■■□□□ 1.01
NFKB1-204ENST00000504044 ECM2O94769 699 aaPredicted RBP21.38■■□□□ 1.01
NFKB1-204ENST00000504044 RGS19P49795 217 aa21.38■■□□□ 1.01
NFKB1-204ENST00000504044 SOX10P56693 466 aa21.38■■□□□ 1.01
NFKB1-204ENST00000504044 HERVK_113P62684 666 aa21.38■■□□□ 1.01
NFKB1-204ENST00000504044 MLLT1Q03111 559 aaPredicted RBP21.38■■□□□ 1.01
NFKB1-204ENST00000504044 PDE4BQ07343 736 aa21.38■■□□□ 1.01
NFKB1-204ENST00000504044 LPAR1Q92633 364 aa21.38■■□□□ 1.01
NFKB1-204ENST00000504044 HIP1O00291 1037 aa21.37■■□□□ 1.01
NFKB1-204ENST00000504044 AKR1B1P15121 316 aa21.37■■□□□ 1.01
NFKB1-204ENST00000504044 VCAM1P19320 739 aa21.37■■□□□ 1.01
NFKB1-204ENST00000504044 GUCY1A2P33402 732 aa21.37■■□□□ 1.01
NFKB1-204ENST00000504044 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
NFKB1-204ENST00000504044 ZNF444Q8N0Y2 327 aaPredicted RBP21.37■■□□□ 1.01
NFKB1-204ENST00000504044 GPRC5AQ8NFJ5 357 aa21.37■■□□□ 1.01
NFKB1-204ENST00000504044 ACER1Q8TDN7 264 aa21.37■■□□□ 1.01
NFKB1-204ENST00000504044 P2RX7Q99572 595 aaKnown RBP21.37■■□□□ 1.01
NFKB1-204ENST00000504044 ROBO3Q96MS0 1386 aa21.36■■□□□ 1.01
NFKB1-204ENST00000504044 LOC285556D6RIA3 1793 aa21.36■■□□□ 1.01
NFKB1-204ENST00000504044 CCNA1P78396 465 aa21.36■■□□□ 1.01
NFKB1-204ENST00000504044 MCMDC2Q4G0Z9 681 aa21.36■■□□□ 1.01
NFKB1-204ENST00000504044 PLEKHM2Q8IWE5 1019 aa21.36■■□□□ 1.01
NFKB1-204ENST00000504044 SEC62Q99442 399 aaKnown RBP21.36■■□□□ 1.01
NFKB1-204ENST00000504044 CWC22Q9HCG8 908 aaKnown RBP21.36■■□□□ 1.01
NFKB1-204ENST00000504044 MORF4L1Q9UBU8 362 aa21.36■■□□□ 1.01
NFKB1-204ENST00000504044 UBXN2AP68543 259 aa21.35■■□□□ 1.01
NFKB1-204ENST00000504044 ATP2B2Q01814 1243 aa21.35■■□□□ 1.01
NFKB1-204ENST00000504044 EVX2Q03828 476 aa21.35■■□□□ 1.01
NFKB1-204ENST00000504044 PPP4R3BQ5MIZ7 849 aa21.35■■□□□ 1.01
NFKB1-204ENST00000504044 CATSPERGQ6ZRH7 1159 aa21.35■■□□□ 1.01
NFKB1-204ENST00000504044 SLAIN1Q8ND83 568 aa21.35■■□□□ 1.01
NFKB1-204ENST00000504044 RPAP3Q9H6T3 665 aaPredicted RBP21.35■■□□□ 1.01
NFKB1-204ENST00000504044 EPB41L4AQ9HCS5 686 aaPredicted RBP21.35■■□□□ 1.01
NFKB1-204ENST00000504044 GOPCQ9HD26 462 aa21.35■■□□□ 1.01
NFKB1-204ENST00000504044 BIN2Q9UBW5 565 aaPredicted RBP21.35■■□□□ 1.01
NFKB1-204ENST00000504044 PTPRFP10586 1907 aa21.34■■□□□ 1.01
NFKB1-204ENST00000504044 MAPK4P31152 587 aa21.34■■□□□ 1.01
NFKB1-204ENST00000504044 GRK4P32298 578 aa21.34■■□□□ 1.01
NFKB1-204ENST00000504044 CAP1Q01518 475 aa21.34■■□□□ 1.01
NFKB1-204ENST00000504044 PRKCZQ05513 592 aa21.34■■□□□ 1.01
NFKB1-204ENST00000504044 HOXC10Q9NYD6 342 aa21.34■■□□□ 1.01
NFKB1-204ENST00000504044 TMX2Q9Y320 296 aa21.34■■□□□ 1.01
NFKB1-204ENST00000504044 RABGAP1Q9Y3P9 1069 aa21.34■■□□□ 1.01
NFKB1-204ENST00000504044 ZNF333Q96JL9 665 aa21.33■■□□□ 1.01
NFKB1-204ENST00000504044 PAGR1Q9BTK6 254 aa21.33■■□□□ 1.01
NFKB1-204ENST00000504044 TANGO6Q9C0B7 1094 aa21.33■■□□□ 1.01
NFKB1-204ENST00000504044 VCPKMTQ9H867 229 aa21.33■■□□□ 1.01
NFKB1-204ENST00000504044 DIAPH3Q9NSV4 1193 aa21.33■■□□□ 1.01
NFKB1-204ENST00000504044 CTGFP29279 349 aa21.32■■□□□ 1
NFKB1-204ENST00000504044 PPARAQ07869 468 aa21.32■■□□□ 1
NFKB1-204ENST00000504044 IRF5Q13568 498 aa21.32■■□□□ 1
NFKB1-204ENST00000504044 COG2Q14746 738 aa21.32■■□□□ 1
NFKB1-204ENST00000504044 STK11IPQ8N1F8 1099 aa21.32■■□□□ 1
NFKB1-204ENST00000504044 A0A1W2PRG0 241 aa21.31■■□□□ 1
NFKB1-204ENST00000504044 WDR46O15213 610 aaKnown RBP21.31■■□□□ 1
NFKB1-204ENST00000504044 TSPY3P0CV98 308 aa21.31■■□□□ 1
NFKB1-204ENST00000504044 TSPY8P0CW00 308 aa21.31■■□□□ 1
NFKB1-204ENST00000504044 EEF2P13639 858 aaKnown RBP21.31■■□□□ 1
NFKB1-204ENST00000504044 RASA1P20936 1047 aa21.31■■□□□ 1
NFKB1-204ENST00000504044 FLT3LGP49771 235 aa21.31■■□□□ 1
NFKB1-204ENST00000504044 ERVK-9P63128 1117 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms