RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 PPARAQ07869 468 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 DPYDQ12882 1025 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 TRMT44Q8IYL2 757 aaKnown RBP17.03■□□□□ 0.32
SNF8-203ENST00000504000 CEP112Q8N8E3 955 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 PAGE5Q96GU1 130 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 IQSEC3Q9UPP2 1182 aaPredicted RBP17.03■□□□□ 0.32
SNF8-203ENST00000504000 PRKAB2O43741 272 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 CALM1P0DP23 149 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 CALM2P0DP24 149 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 CALM3P0DP25 149 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 FUT2Q10981 343 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 ZNF827Q17R98 1081 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 SRGAP1Q7Z6B7 1085 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 SLC4A9Q96Q91 983 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 PARD6BQ9BYG5 372 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 ZBTB1Q9Y2K1 713 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 SYNRGQ9UMZ2 1314 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 KIF5CO60282 957 aa17.02■□□□□ 0.32
SNF8-203ENST00000504000 TUBBP07437 444 aa17.02■□□□□ 0.32
SNF8-203ENST00000504000 FGRP09769 529 aa17.02■□□□□ 0.32
SNF8-203ENST00000504000 PKN1Q16512 942 aa17.02■□□□□ 0.32
SNF8-203ENST00000504000 RRP12Q5JTH9 1297 aaKnown RBP17.02■□□□□ 0.32
SNF8-203ENST00000504000 USP49Q70CQ1 688 aa17.02■□□□□ 0.32
SNF8-203ENST00000504000 DZIP3Q86Y13 1208 aaKnown RBP17.02■□□□□ 0.32
SNF8-203ENST00000504000 FAM177A1Q8N128 213 aaPredicted RBP17.02■□□□□ 0.32
SNF8-203ENST00000504000 IGSF22Q8N9C0 903 aa17.02■□□□□ 0.32
SNF8-203ENST00000504000 DHX58Q96C10 678 aa17.02■□□□□ 0.32
SNF8-203ENST00000504000 FUT8Q9BYC5 575 aa17.02■□□□□ 0.32
SNF8-203ENST00000504000 MRPL44Q9H9J2 332 aaKnown RBP17.02■□□□□ 0.32
SNF8-203ENST00000504000 MYO1AQ9UBC5 1043 aa17.02■□□□□ 0.32
SNF8-203ENST00000504000 CDC23Q9UJX2 597 aa17.02■□□□□ 0.32
SNF8-203ENST00000504000 TTF2Q9UNY4 1162 aaKnown RBP17.02■□□□□ 0.32
SNF8-203ENST00000504000 NHSL1Q5SYE7 1610 aa17.02■□□□□ 0.32
SNF8-203ENST00000504000 XIRP1Q702N8 1843 aaKnown RBP17.02■□□□□ 0.31
SNF8-203ENST00000504000 PPP1R3GB7ZBB8 358 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 MFAP3LO75121 409 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 USP5P45974 858 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 GRAMD1CQ8IYS0 662 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 CCDC12Q8WUD4 166 aaPredicted RBP17.01■□□□□ 0.31
SNF8-203ENST00000504000 ZKSCAN3Q9BRR0 538 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 BRMS1Q9HCU9 246 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 SEC31BQ9NQW1 1179 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 TEX33O43247 280 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 SASH3O75995 380 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 TRAPPC10P48553 1259 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 SPAG1Q07617 926 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 RBL2Q08999 1139 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 PTPN21Q16825 1174 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 HSP90AA4PQ58FG1 418 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 TMTC1Q8IUR5 882 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 HELBQ8NG08 1087 aaPredicted RBP17.01■□□□□ 0.31
SNF8-203ENST00000504000 TNFRSF25Q93038 417 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 TOMM22Q9NS69 142 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 LIMA1Q9UHB6 759 aaKnown RBP17.01■□□□□ 0.31
SNF8-203ENST00000504000 TNKSO95271 1327 aa17.01■□□□□ 0.31
SNF8-203ENST00000504000 A0A087X0B3 334 aa17■□□□□ 0.31
SNF8-203ENST00000504000 MAP2K7O14733 419 aa17■□□□□ 0.31
SNF8-203ENST00000504000 CD44P16070 742 aaKnown RBP17■□□□□ 0.31
SNF8-203ENST00000504000 GPS2Q13227 327 aa17■□□□□ 0.31
SNF8-203ENST00000504000 TRIM14Q14142 442 aa17■□□□□ 0.31
SNF8-203ENST00000504000 SMC1AQ14683 1233 aaKnown RBP17■□□□□ 0.31
SNF8-203ENST00000504000 RAD9BQ6WBX8 426 aa17■□□□□ 0.31
SNF8-203ENST00000504000 TXLNBQ8N3L3 684 aa17■□□□□ 0.31
SNF8-203ENST00000504000 MSANTD4Q8NCY6 345 aa17■□□□□ 0.31
SNF8-203ENST00000504000 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
SNF8-203ENST00000504000 ZSCAN10Q96SZ4 725 aaPredicted RBP17■□□□□ 0.31
SNF8-203ENST00000504000 PSD3Q9NYI0 1048 aa17■□□□□ 0.31
SNF8-203ENST00000504000 RAB21Q9UL25 225 aa17■□□□□ 0.31
SNF8-203ENST00000504000 DISP2A7MBM2 1401 aa17■□□□□ 0.31
SNF8-203ENST00000504000 SOWAHDA6NJG2 315 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 SEC31AO94979 1220 aaKnown RBP16.99■□□□□ 0.31
SNF8-203ENST00000504000 MYH6P13533 1939 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 CHMP4BP1P59074 171 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 ATP2C1P98194 919 aaPredicted RBP16.99■□□□□ 0.31
SNF8-203ENST00000504000 SEMA3FQ13275 785 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 CCDC152Q4G0S7 254 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 PARP10Q53GL7 1025 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 CATIPQ7Z7H3 387 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 SYMPKQ92797 1274 aaKnown RBP16.99■□□□□ 0.31
SNF8-203ENST00000504000 SHISA4Q96DD7 197 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 EPSTI1Q96J88 318 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 DESI2Q9BSY9 194 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 LRP2BPQ9P2M1 347 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 SLIT2O94813 1529 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 ZNF804BA4D1E1 1349 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 DDAH1O94760 285 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 BRIP1Q9BX63 1249 aa16.99■□□□□ 0.31
SNF8-203ENST00000504000 IGHMBP2P38935 993 aaKnown RBP16.98■□□□□ 0.31
SNF8-203ENST00000504000 EIF5P55010 431 aaKnown RBP16.98■□□□□ 0.31
SNF8-203ENST00000504000 TROAPQ12815 778 aa16.98■□□□□ 0.31
SNF8-203ENST00000504000 MTF1Q14872 753 aa16.98■□□□□ 0.31
SNF8-203ENST00000504000 E2F4Q16254 413 aa16.98■□□□□ 0.31
SNF8-203ENST00000504000 CMTR1Q8N1G2 835 aaKnown RBP16.98■□□□□ 0.31
SNF8-203ENST00000504000 CCDC82Q8N4S0 544 aa16.98■□□□□ 0.31
SNF8-203ENST00000504000 ENAHQ8N8S7 591 aaPredicted RBP16.98■□□□□ 0.31
SNF8-203ENST00000504000 IQUBQ8NA54 791 aa16.98■□□□□ 0.31
SNF8-203ENST00000504000 RWDD2AQ9UIY3 292 aa16.98■□□□□ 0.31
SNF8-203ENST00000504000 TAOK2Q9UL54 1235 aa16.98■□□□□ 0.31
SNF8-203ENST00000504000 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms