RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 MAPK4P31152 587 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 BMP8BP34820 402 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 LHX8Q68G74 356 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 USP17L2Q6R6M4 530 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 LBX2Q6XYB7 198 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 GPR142Q7Z601 462 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 MAGEB6Q8N7X4 407 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 MIGA1Q8NAN2 632 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 SOCS4Q8WXH5 440 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 RIOK1Q9BRS2 568 aaKnown RBP10.97□□□□□ -0.65
PROM1-204ENST00000503884 NBPF3Q9H094 633 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 STAP2Q9UGK3 403 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 SERPINB13Q9UIV8 391 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 A0A0G2JMZ2 1700 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 LAMA2P24043 3122 aaKnown RBP10.96□□□□□ -0.65
PROM1-204ENST00000503884 A0A0C4DFX4 3053 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 PARP14Q460N5 1801 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 PFASO15067 1338 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 IDH1O75874 414 aaKnown RBP10.96□□□□□ -0.65
PROM1-204ENST00000503884 IGHA2P01877 340 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
PROM1-204ENST00000503884 GUCY1A2P33402 732 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 SHMT1P34896 483 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 GABPAQ06546 454 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 CACNB2Q08289 660 aaPredicted RBP10.96□□□□□ -0.65
PROM1-204ENST00000503884 CATSPERGQ6ZRH7 1159 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 PLEKHH3Q7Z736 793 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 ITPRIPQ8IWB1 547 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 TRMT44Q8IYL2 757 aaKnown RBP10.96□□□□□ -0.65
PROM1-204ENST00000503884 TRIM34Q9BYJ4 488 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 KIAA1683Q9H0B3 1180 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 C11orf49Q9H6J7 331 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 EXOC6BQ9Y2D4 811 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 RABGAP1Q9Y3P9 1069 aa10.96□□□□□ -0.65
PROM1-204ENST00000503884 MYH8P13535 1937 aa10.96□□□□□ -0.66
PROM1-204ENST00000503884 ZNF236Q9UL36 1845 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 USP17L18D6R9N7 530 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 USP17L22D6RA61 530 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 USP17L17D6RBQ6 530 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 USP17L19D6RCP7 530 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 USP17L20D6RJB6 530 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 RGS2P41220 211 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 USP5P45974 858 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 PLCD1P51178 756 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 USP17L24Q0WX57 530 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 MAP3K12Q12852 859 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 CCL14Q16627 93 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 TTC6Q86TZ1 520 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 FTSJ3Q8IY81 847 aaKnown RBP10.95□□□□□ -0.66
PROM1-204ENST00000503884 APBA2Q99767 749 aa10.95□□□□□ -0.66
PROM1-204ENST00000503884 HOXC6P09630 235 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 ZKSCAN1P17029 563 aaPredicted RBP10.94□□□□□ -0.66
PROM1-204ENST00000503884 VCAM1P19320 739 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 CCND3P30281 292 aaPredicted RBP10.94□□□□□ -0.66
PROM1-204ENST00000503884 USP14P54578 494 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 MAP2K5Q13163 448 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 PDE3AQ14432 1141 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 ABCB5Q2M3G0 1257 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 CERKLQ49MI3 558 aaPredicted RBP10.94□□□□□ -0.66
PROM1-204ENST00000503884 GPR153Q6NV75 609 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 AACSQ86V21 672 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 ERC1Q8IUD2 1116 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 C7orf61Q8IZ16 206 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 ACER1Q8TDN7 264 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.94□□□□□ -0.66
PROM1-204ENST00000503884 LRCH3Q96II8 777 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 PAGR1Q9BTK6 254 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 FLRT1Q9NZU1 646 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 BTBD7Q9P203 1132 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 MYH7P12883 1935 aa10.94□□□□□ -0.66
PROM1-204ENST00000503884 BAZ2AQ9UIF9 1905 aaKnown RBP10.94□□□□□ -0.66
PROM1-204ENST00000503884 TCRBV5S4A2TA0A5A2 114 aa10.93□□□□□ -0.66
PROM1-204ENST00000503884 SPDYE16A6NNV3 312 aaPredicted RBP10.93□□□□□ -0.66
PROM1-204ENST00000503884 PTPREP23469 700 aa10.93□□□□□ -0.66
PROM1-204ENST00000503884 EVX2Q03828 476 aa10.93□□□□□ -0.66
PROM1-204ENST00000503884 ZYXQ15942 572 aaKnown RBP10.93□□□□□ -0.66
PROM1-204ENST00000503884 RHPN1Q8TCX5 695 aa10.93□□□□□ -0.66
PROM1-204ENST00000503884 ZMYND8Q9ULU4 1186 aaPredicted RBP10.93□□□□□ -0.66
PROM1-204ENST00000503884 ZNFX1Q9P2E3 1918 aaKnown RBP10.93□□□□□ -0.66
PROM1-204ENST00000503884 CUL9Q8IWT3 2517 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 A0A1W2PRG0 241 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 SLC15A5A6NIM6 579 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 PDE6AP16499 860 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 MAGEA10P43363 369 aaPredicted RBP10.92□□□□□ -0.66
PROM1-204ENST00000503884 CCNA1P78396 465 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 GRB14Q14449 540 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 RAB3GAP1Q15042 981 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 TTF1Q15361 905 aaPredicted RBP10.92□□□□□ -0.66
PROM1-204ENST00000503884 LRIT3Q3SXY7 679 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 SIRT2Q8IXJ6 389 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 PANK1Q8TE04 598 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 EDC3Q96F86 508 aaKnown RBP10.92□□□□□ -0.66
PROM1-204ENST00000503884 FEZ1Q99689 392 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 IL1RAPL2Q9NP60 686 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 UNC80Q8N2C7 3258 aa10.92□□□□□ -0.66
PROM1-204ENST00000503884 COL11A1P12107 1806 aaPredicted RBP10.91□□□□□ -0.66
PROM1-204ENST00000503884 ZNF532Q9HCE3 1301 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms