RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 DNAJC18Q9H819 358 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 PDLIM7Q9NR12 457 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 CYBAP13498 195 aa19.49■□□□□ 0.71
PDLIM7-210ENST00000503827 PLCG2P16885 1265 aa19.49■□□□□ 0.71
PDLIM7-210ENST00000503827 GRB14Q14449 540 aa19.49■□□□□ 0.71
PDLIM7-210ENST00000503827 SNX17Q15036 470 aa19.49■□□□□ 0.71
PDLIM7-210ENST00000503827 GORABQ5T7V8 394 aa19.49■□□□□ 0.71
PDLIM7-210ENST00000503827 TRPV1Q8NER1 839 aa19.49■□□□□ 0.71
PDLIM7-210ENST00000503827 RNPC3Q96LT9 517 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-210ENST00000503827 LRP2BPQ9P2M1 347 aa19.49■□□□□ 0.71
PDLIM7-210ENST00000503827 MYCNP04198 464 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-210ENST00000503827 TFCP2Q12800 502 aa19.48■□□□□ 0.71
PDLIM7-210ENST00000503827 PI16Q6UXB8 463 aa19.48■□□□□ 0.71
PDLIM7-210ENST00000503827 MAPKAPK5Q8IW41 473 aa19.48■□□□□ 0.71
PDLIM7-210ENST00000503827 TGFBRAP1Q8WUH2 860 aa19.48■□□□□ 0.71
PDLIM7-210ENST00000503827 C12orf42Q96LP6 360 aa19.48■□□□□ 0.71
PDLIM7-210ENST00000503827 FEZ1Q99689 392 aa19.48■□□□□ 0.71
PDLIM7-210ENST00000503827 AATFQ9NY61 560 aaKnown RBP eCLIP19.48■□□□□ 0.71
PDLIM7-210ENST00000503827 TRIM43BA6NCK2 446 aa19.47■□□□□ 0.71
PDLIM7-210ENST00000503827 ZYXQ15942 572 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-210ENST00000503827 ATF7IPQ6VMQ6 1270 aa19.47■□□□□ 0.71
PDLIM7-210ENST00000503827 CATSPERGQ6ZRH7 1159 aa19.47■□□□□ 0.71
PDLIM7-210ENST00000503827 SH3RF1Q7Z6J0 888 aa19.47■□□□□ 0.71
PDLIM7-210ENST00000503827 DPP9Q86TI2 863 aa19.47■□□□□ 0.71
PDLIM7-210ENST00000503827 TRIM43Q96BQ3 446 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-210ENST00000503827 PALD1Q9ULE6 856 aa19.47■□□□□ 0.71
PDLIM7-210ENST00000503827 FLT1P17948 1338 aa19.47■□□□□ 0.71
PDLIM7-210ENST00000503827 HLA-DOAP06340 250 aa19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 ADCYAP1R1P41586 468 aa19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 GRIN2CQ14957 1233 aa19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 C1orf53Q5VUE5 145 aa19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 ANO1Q5XXA6 986 aa19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 NAA16Q6N069 864 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 USP38Q8NB14 1042 aa19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 RAPGEFL1Q9UHV5 662 aa19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 TACC3Q9Y6A5 838 aa19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 MYH1P12882 1939 aa19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 CDH23Q9H251 3354 aa19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 ZNF236Q9UL36 1845 aa19.46■□□□□ 0.71
PDLIM7-210ENST00000503827 SEPT4O43236 478 aa19.45■□□□□ 0.7
PDLIM7-210ENST00000503827 GH2P01242 217 aa19.45■□□□□ 0.7
PDLIM7-210ENST00000503827 ARID4AP29374 1257 aaPredicted RBP19.45■□□□□ 0.7
PDLIM7-210ENST00000503827 USP14P54578 494 aa19.45■□□□□ 0.7
PDLIM7-210ENST00000503827 OLFML2BQ68BL8 750 aa19.45■□□□□ 0.7
PDLIM7-210ENST00000503827 LBX2Q6XYB7 198 aa19.45■□□□□ 0.7
PDLIM7-210ENST00000503827 FERMT2Q96AC1 680 aa19.45■□□□□ 0.7
PDLIM7-210ENST00000503827 BTBD7Q9P203 1132 aa19.45■□□□□ 0.7
PDLIM7-210ENST00000503827 IGHA2P01877 340 aa19.44■□□□□ 0.7
PDLIM7-210ENST00000503827 PLA2G5P39877 138 aa19.44■□□□□ 0.7
PDLIM7-210ENST00000503827 PPP4CP60510 307 aa19.44■□□□□ 0.7
PDLIM7-210ENST00000503827 TLE2Q04725 743 aa19.44■□□□□ 0.7
PDLIM7-210ENST00000503827 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-210ENST00000503827 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-210ENST00000503827 STRNO43815 780 aa19.43■□□□□ 0.7
PDLIM7-210ENST00000503827 UQCRFS1P1P0C7P4 283 aa19.43■□□□□ 0.7
PDLIM7-210ENST00000503827 DNAJB2P25686 324 aa19.43■□□□□ 0.7
PDLIM7-210ENST00000503827 MCAMP43121 646 aa19.43■□□□□ 0.7
PDLIM7-210ENST00000503827 LRRC41Q15345 812 aa19.43■□□□□ 0.7
PDLIM7-210ENST00000503827 ATXN2LQ8WWM7 1075 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-210ENST00000503827 FAM122AQ96E09 287 aa19.43■□□□□ 0.7
PDLIM7-210ENST00000503827 SAP30BPQ9UHR5 308 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-210ENST00000503827 MYO5AQ9Y4I1 1855 aaKnown RBP19.42■□□□□ 0.7
PDLIM7-210ENST00000503827 CLTBP09497 229 aa19.42■□□□□ 0.7
PDLIM7-210ENST00000503827 RAG1P15918 1043 aa19.42■□□□□ 0.7
PDLIM7-210ENST00000503827 VCAM1P19320 739 aa19.42■□□□□ 0.7
PDLIM7-210ENST00000503827 ADORA2AP29274 412 aa19.42■□□□□ 0.7
PDLIM7-210ENST00000503827 ALDH1L2Q3SY69 923 aa19.42■□□□□ 0.7
PDLIM7-210ENST00000503827 KIAA1683Q9H0B3 1180 aa19.42■□□□□ 0.7
PDLIM7-210ENST00000503827 ZNF576Q9H609 170 aa19.42■□□□□ 0.7
PDLIM7-210ENST00000503827 SLC5A4Q9NY91 659 aa19.42■□□□□ 0.7
PDLIM7-210ENST00000503827 SMCHD1A6NHR9 2005 aa19.41■□□□□ 0.7
PDLIM7-210ENST00000503827 SPDYE16A6NNV3 312 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-210ENST00000503827 SRGAP3O43295 1099 aa19.41■□□□□ 0.7
PDLIM7-210ENST00000503827 EPHB4P54760 987 aa19.41■□□□□ 0.7
PDLIM7-210ENST00000503827 FPGSQ05932 587 aa19.41■□□□□ 0.7
PDLIM7-210ENST00000503827 RAB3GAP1Q15042 981 aa19.41■□□□□ 0.7
PDLIM7-210ENST00000503827 GAS2L1Q99501 681 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-210ENST00000503827 SMC4Q9NTJ3 1288 aa19.41■□□□□ 0.7
PDLIM7-210ENST00000503827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-210ENST00000503827 ZNF521Q96K83 1311 aa19.41■□□□□ 0.7
PDLIM7-210ENST00000503827 ZNFX1Q9P2E3 1918 aaKnown RBP19.41■□□□□ 0.7
PDLIM7-210ENST00000503827 ITGB8P26012 769 aa19.4■□□□□ 0.7
PDLIM7-210ENST00000503827 TATDN1Q6P1N9 297 aa19.4■□□□□ 0.7
PDLIM7-210ENST00000503827 PPM1EQ8WY54 764 aa19.4■□□□□ 0.7
PDLIM7-210ENST00000503827 TIFAQ96CG3 184 aa19.4■□□□□ 0.7
PDLIM7-210ENST00000503827 RPAP3Q9H6T3 665 aaPredicted RBP19.4■□□□□ 0.7
PDLIM7-210ENST00000503827 KIAA0355O15063 1070 aa19.39■□□□□ 0.69
PDLIM7-210ENST00000503827 FAM47AQ5JRC9 791 aa19.39■□□□□ 0.69
PDLIM7-210ENST00000503827 ASB2Q96Q27 587 aa19.39■□□□□ 0.69
PDLIM7-210ENST00000503827 MOV10L1Q9BXT6 1211 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-210ENST00000503827 THEGQ9P2T0 379 aa19.39■□□□□ 0.69
PDLIM7-210ENST00000503827 PHF24Q9UPV7 400 aa19.39■□□□□ 0.69
PDLIM7-210ENST00000503827 MUC3AQ02505 3323 aa19.39■□□□□ 0.69
PDLIM7-210ENST00000503827 PLXNA1Q9UIW2 1896 aa19.39■□□□□ 0.69
PDLIM7-210ENST00000503827 PRAMEF19Q5SWL8 479 aa19.38■□□□□ 0.69
PDLIM7-210ENST00000503827 ADGRA1Q86SQ6 560 aa19.38■□□□□ 0.69
PDLIM7-210ENST00000503827 FAM9BQ8IZU0 186 aa19.38■□□□□ 0.69
PDLIM7-210ENST00000503827 SHCBP1Q8NEM2 672 aa19.38■□□□□ 0.69
PDLIM7-210ENST00000503827 ACER1Q8TDN7 264 aa19.38■□□□□ 0.69
PDLIM7-210ENST00000503827 ADAMTS19Q8TE59 1207 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms