RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 NLRP12P59046 1061 aa25.87■■□□□ 1.73
PCDH1-204ENST00000503492 ZRSR1Q15695 479 aaKnown RBP25.87■■□□□ 1.73
PCDH1-204ENST00000503492 NAV1Q8NEY1 1877 aa25.86■■□□□ 1.73
PCDH1-204ENST00000503492 KRT2P35908 639 aa25.86■■□□□ 1.73
PCDH1-204ENST00000503492 SPECC1Q5M775 1068 aa25.86■■□□□ 1.73
PCDH1-204ENST00000503492 DRC7Q8IY82 874 aa25.86■■□□□ 1.73
PCDH1-204ENST00000503492 NRBP1Q9UHY1 535 aa25.86■■□□□ 1.73
PCDH1-204ENST00000503492 KCNH3Q9ULD8 1083 aa25.86■■□□□ 1.73
PCDH1-204ENST00000503492 ATP2B1P20020 1258 aa25.85■■□□□ 1.73
PCDH1-204ENST00000503492 EARS2Q5JPH6 523 aaKnown RBP25.85■■□□□ 1.73
PCDH1-204ENST00000503492 BTDP43251 543 aa25.85■■□□□ 1.73
PCDH1-204ENST00000503492 MAPKAPK5Q8IW41 473 aa25.85■■□□□ 1.73
PCDH1-204ENST00000503492 C17orf53Q8N3J3 647 aaPredicted RBP25.85■■□□□ 1.73
PCDH1-204ENST00000503492 TUBE1Q9UJT0 475 aa25.85■■□□□ 1.73
PCDH1-204ENST00000503492 CDC25BP30305 580 aa25.84■■□□□ 1.73
PCDH1-204ENST00000503492 PLCD1P51178 756 aa25.84■■□□□ 1.73
PCDH1-204ENST00000503492 LONRF3Q496Y0 759 aa25.84■■□□□ 1.73
PCDH1-204ENST00000503492 CCDC186Q7Z3E2 898 aa25.84■■□□□ 1.73
PCDH1-204ENST00000503492 BPIFA3Q9BQP9 254 aa25.84■■□□□ 1.73
PCDH1-204ENST00000503492 NPY5RQ15761 445 aa25.84■■□□□ 1.73
PCDH1-204ENST00000503492 PYCARDQ9ULZ3 195 aa25.84■■□□□ 1.73
PCDH1-204ENST00000503492 LTBP1Q14766 1721 aa25.84■■□□□ 1.73
PCDH1-204ENST00000503492 CDK5RAP2Q96SN8 1893 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 GPR75-ASB3A0A0A6YYF3 556 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 NOLC1Q14978 699 aaKnown RBP eCLIP25.83■■□□□ 1.73
PCDH1-204ENST00000503492 KRBA2Q6ZNG9 492 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 DGKHQ86XP1 1220 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 AMOTL1Q8IY63 956 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 SLC44A5Q8NCS7 719 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 MKNK2Q9HBH9 465 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 CLIP2Q9UDT6 1046 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 SAP30BPQ9UHR5 308 aaKnown RBP25.83■■□□□ 1.73
PCDH1-204ENST00000503492 LRRC37AA6NMS7 1700 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 C6orf229H3BNL8 230 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 NT5C2P49902 561 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 ZNF827Q17R98 1081 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 MFSD14BQ5SR56 506 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 ANKS1AQ92625 1134 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 KAT14Q9H8E8 782 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 CEP131Q9UPN4 1083 aa25.83■■□□□ 1.73
PCDH1-204ENST00000503492 BAZ2BQ9UIF8 2168 aaKnown RBP25.82■■□□□ 1.72
PCDH1-204ENST00000503492 PNOCQ13519 176 aa25.82■■□□□ 1.72
PCDH1-204ENST00000503492 METTL16Q86W50 562 aaKnown RBP25.82■■□□□ 1.72
PCDH1-204ENST00000503492 MRFAP1L1Q96HT8 127 aa25.82■■□□□ 1.72
PCDH1-204ENST00000503492 SRPRBQ9Y5M8 271 aaKnown RBP25.82■■□□□ 1.72
PCDH1-204ENST00000503492 ANKRD31Q8N7Z5 1873 aa25.82■■□□□ 1.72
PCDH1-204ENST00000503492 PPEF1O14829 653 aaPredicted RBP25.82■■□□□ 1.72
PCDH1-204ENST00000503492 ISM2Q6H9L7 571 aa25.82■■□□□ 1.72
PCDH1-204ENST00000503492 KIAA1524Q8TCG1 905 aa25.82■■□□□ 1.72
PCDH1-204ENST00000503492 TNFRSF25Q93038 417 aa25.82■■□□□ 1.72
PCDH1-204ENST00000503492 USP17L3A6NCW0 530 aa25.81■■□□□ 1.72
PCDH1-204ENST00000503492 USP17L4A6NCW7 530 aa25.81■■□□□ 1.72
PCDH1-204ENST00000503492 USP17L1Q7RTZ2 530 aa25.81■■□□□ 1.72
PCDH1-204ENST00000503492 SP8Q8IXZ3 490 aa25.81■■□□□ 1.72
PCDH1-204ENST00000503492 ZNF579Q8NAF0 562 aaKnown RBP25.81■■□□□ 1.72
PCDH1-204ENST00000503492 CNNM3Q8NE01 707 aa25.81■■□□□ 1.72
PCDH1-204ENST00000503492 SCG2P13521 617 aa25.81■■□□□ 1.72
PCDH1-204ENST00000503492 VEGFAP15692 232 aaPredicted RBP25.81■■□□□ 1.72
PCDH1-204ENST00000503492 NOM1Q5C9Z4 860 aaKnown RBP25.81■■□□□ 1.72
PCDH1-204ENST00000503492 CERS3Q8IU89 383 aa25.81■■□□□ 1.72
PCDH1-204ENST00000503492 PNMA1Q8ND90 353 aa25.81■■□□□ 1.72
PCDH1-204ENST00000503492 R3HCC1Q9Y3T6 440 aaKnown RBP25.81■■□□□ 1.72
PCDH1-204ENST00000503492 TRIM75PA6NK02 468 aa25.8■■□□□ 1.72
PCDH1-204ENST00000503492 KIF5BP33176 963 aa25.8■■□□□ 1.72
PCDH1-204ENST00000503492 TEX11Q8IYF3 940 aa25.8■■□□□ 1.72
PCDH1-204ENST00000503492 FAM13BQ9NYF5 915 aa25.8■■□□□ 1.72
PCDH1-204ENST00000503492 PFKFB3Q16875 520 aaPredicted RBP25.8■■□□□ 1.72
PCDH1-204ENST00000503492 CCDC144BQ3MJ40 725 aa25.8■■□□□ 1.72
PCDH1-204ENST00000503492 TMC4Q7Z404 712 aa25.8■■□□□ 1.72
PCDH1-204ENST00000503492 FAM163AQ96GL9 167 aaPredicted RBP25.8■■□□□ 1.72
PCDH1-204ENST00000503492 BRMS1Q9HCU9 246 aa25.8■■□□□ 1.72
PCDH1-204ENST00000503492 TCP11L1Q9NUJ3 509 aa25.8■■□□□ 1.72
PCDH1-204ENST00000503492 SPTLC3Q9NUV7 552 aa25.8■■□□□ 1.72
PCDH1-204ENST00000503492 WNT7AO00755 349 aa25.79■■□□□ 1.72
PCDH1-204ENST00000503492 TSPY3P0CV98 308 aa25.79■■□□□ 1.72
PCDH1-204ENST00000503492 TSPY8P0CW00 308 aa25.79■■□□□ 1.72
PCDH1-204ENST00000503492 RASA1P20936 1047 aa25.79■■□□□ 1.72
PCDH1-204ENST00000503492 RHBDL3P58872 404 aa25.79■■□□□ 1.72
PCDH1-204ENST00000503492 COL23A1Q86Y22 540 aaPredicted RBP25.79■■□□□ 1.72
PCDH1-204ENST00000503492 FOXP4Q8IVH2 680 aaPredicted RBP25.79■■□□□ 1.72
PCDH1-204ENST00000503492 ZNF444Q8N0Y2 327 aaPredicted RBP25.79■■□□□ 1.72
PCDH1-204ENST00000503492 TBC1D22AQ8WUA7 517 aa25.79■■□□□ 1.72
PCDH1-204ENST00000503492 ATP6V0A2Q9Y487 856 aa25.78■■□□□ 1.72
PCDH1-204ENST00000503492 MORC2Q9Y6X9 1032 aaPredicted RBP25.78■■□□□ 1.72
PCDH1-204ENST00000503492 FAM205AQ6ZU69 1335 aa25.78■■□□□ 1.72
PCDH1-204ENST00000503492 FOXN1O15353 648 aa25.78■■□□□ 1.72
PCDH1-204ENST00000503492 MDM2Q00987 491 aaPredicted RBP25.78■■□□□ 1.72
PCDH1-204ENST00000503492 ELOA2Q8IYF1 753 aaPredicted RBP25.78■■□□□ 1.72
PCDH1-204ENST00000503492 STAG2Q8N3U4 1231 aa25.78■■□□□ 1.72
PCDH1-204ENST00000503492 AKT1S1Q96B36 256 aa25.78■■□□□ 1.72
PCDH1-204ENST00000503492 CSRNP2Q9H175 543 aa25.78■■□□□ 1.72
PCDH1-204ENST00000503492 GAKO14976 1311 aa25.78■■□□□ 1.72
PCDH1-204ENST00000503492 DDX60LQ5H9U9 1706 aaKnown RBP25.78■■□□□ 1.72
PCDH1-204ENST00000503492 NCAPHQ15003 741 aa25.77■■□□□ 1.72
PCDH1-204ENST00000503492 CCDC178Q5BJE1 867 aa25.77■■□□□ 1.72
PCDH1-204ENST00000503492 FLT1P17948 1338 aa25.77■■□□□ 1.72
PCDH1-204ENST00000503492 RIMBP2O15034 1052 aa25.77■■□□□ 1.72
PCDH1-204ENST00000503492 LRMPQ12912 555 aa25.77■■□□□ 1.72
PCDH1-204ENST00000503492 NLGN1Q8N2Q7 840 aa25.77■■□□□ 1.72
PCDH1-204ENST00000503492 POLR2DO15514 142 aaKnown RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms