RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 USP17L17D6RBQ6 530 aa15.92■□□□□ 0.14
TRIO-205ENST00000503399 USP17L19D6RCP7 530 aa15.92■□□□□ 0.14
TRIO-205ENST00000503399 USP17L20D6RJB6 530 aa15.92■□□□□ 0.14
TRIO-205ENST00000503399 CYP7A1P22680 504 aa15.92■□□□□ 0.14
TRIO-205ENST00000503399 ZAP70P43403 619 aa15.92■□□□□ 0.14
TRIO-205ENST00000503399 USP17L24Q0WX57 530 aa15.92■□□□□ 0.14
TRIO-205ENST00000503399 RAB3GAP1Q15042 981 aa15.92■□□□□ 0.14
TRIO-205ENST00000503399 MIGA1Q8NAN2 632 aa15.92■□□□□ 0.14
TRIO-205ENST00000503399 EDC3Q96F86 508 aaKnown RBP15.92■□□□□ 0.14
TRIO-205ENST00000503399 PIH1D3Q9NQM4 214 aaKnown RBP15.92■□□□□ 0.14
TRIO-205ENST00000503399 RABGAP1Q9Y3P9 1069 aa15.92■□□□□ 0.14
TRIO-205ENST00000503399 CNMDO75829 334 aa15.91■□□□□ 0.14
TRIO-205ENST00000503399 IDH1O75874 414 aaKnown RBP15.91■□□□□ 0.14
TRIO-205ENST00000503399 ATN1P54259 1190 aaPredicted RBP15.91■□□□□ 0.14
TRIO-205ENST00000503399 FAM161BQ96MY7 647 aa15.91■□□□□ 0.14
TRIO-205ENST00000503399 FLRT1Q9NZU1 646 aa15.91■□□□□ 0.14
TRIO-205ENST00000503399 IVNS1ABPQ9Y6Y0 642 aa15.91■□□□□ 0.14
TRIO-205ENST00000503399 MYH1P12882 1939 aa15.91■□□□□ 0.14
TRIO-205ENST00000503399 VCAM1P19320 739 aa15.9■□□□□ 0.14
TRIO-205ENST00000503399 ATP2B2Q01814 1243 aa15.9■□□□□ 0.14
TRIO-205ENST00000503399 C12orf42Q96LP6 360 aa15.9■□□□□ 0.14
TRIO-205ENST00000503399 GPR108Q9NPR9 543 aa15.9■□□□□ 0.14
TRIO-205ENST00000503399 PRKAG2Q9UGJ0 569 aa15.9■□□□□ 0.14
TRIO-205ENST00000503399 DDX20Q9UHI6 824 aaKnown RBP15.9■□□□□ 0.14
TRIO-205ENST00000503399 SLC15A5A6NIM6 579 aa15.89■□□□□ 0.13
TRIO-205ENST00000503399 SURF6O75683 361 aaKnown RBP15.89■□□□□ 0.13
TRIO-205ENST00000503399 PTPREP23469 700 aa15.89■□□□□ 0.13
TRIO-205ENST00000503399 USP14P54578 494 aa15.89■□□□□ 0.13
TRIO-205ENST00000503399 CATSPERGQ6ZRH7 1159 aa15.89■□□□□ 0.13
TRIO-205ENST00000503399 TLR7Q9NYK1 1049 aaKnown RBP15.89■□□□□ 0.13
TRIO-205ENST00000503399 SERPINB13Q9UIV8 391 aa15.89■□□□□ 0.13
TRIO-205ENST00000503399 DNAH12Q6ZR08 3092 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 UNC80Q8N2C7 3258 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 MSCO60682 206 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 BCAR3O75815 825 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 CYP2C19P33261 490 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 POLA2Q14181 598 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 ABCB5Q2M3G0 1257 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 CERKLQ49MI3 558 aaPredicted RBP15.88■□□□□ 0.13
TRIO-205ENST00000503399 TATDN1Q6P1N9 297 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.88■□□□□ 0.13
TRIO-205ENST00000503399 TMEM57Q8N5G2 664 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 MAGEB6Q8N7X4 407 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 NPLOC4Q8TAT6 608 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 ACER1Q8TDN7 264 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 LPAR1Q92633 364 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 KIAA1683Q9H0B3 1180 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 CCDC8Q9H0W5 538 aaPredicted RBP15.88■□□□□ 0.13
TRIO-205ENST00000503399 RPAP3Q9H6T3 665 aaPredicted RBP15.88■□□□□ 0.13
TRIO-205ENST00000503399 C1orf115Q9H7X2 142 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 CABP5Q9NP86 173 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 BTBD7Q9P203 1132 aa15.88■□□□□ 0.13
TRIO-205ENST00000503399 DBNLQ9UJU6 430 aaKnown RBP15.88■□□□□ 0.13
TRIO-205ENST00000503399 DNM1LO00429 736 aa15.87■□□□□ 0.13
TRIO-205ENST00000503399 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
TRIO-205ENST00000503399 RTP1P59025 263 aa15.87■□□□□ 0.13
TRIO-205ENST00000503399 GRB14Q14449 540 aa15.87■□□□□ 0.13
TRIO-205ENST00000503399 ZNF512BQ96KM6 892 aaPredicted RBP15.87■□□□□ 0.13
TRIO-205ENST00000503399 GUCD1Q96NT3 240 aa15.87■□□□□ 0.13
TRIO-205ENST00000503399 COL25A1Q9BXS0 654 aaPredicted RBP15.87■□□□□ 0.13
TRIO-205ENST00000503399 EHD4Q9H223 541 aa15.87■□□□□ 0.13
TRIO-205ENST00000503399 ATP11BQ9Y2G3 1177 aa15.87■□□□□ 0.13
TRIO-205ENST00000503399 SPDYE16A6NNV3 312 aaPredicted RBP15.86■□□□□ 0.13
TRIO-205ENST00000503399 GJC2Q5T442 439 aaPredicted RBP15.86■□□□□ 0.13
TRIO-205ENST00000503399 ZNF697Q5TEC3 545 aa15.86■□□□□ 0.13
TRIO-205ENST00000503399 ANO1Q5XXA6 986 aa15.86■□□□□ 0.13
TRIO-205ENST00000503399 DPP9Q86TI2 863 aa15.86■□□□□ 0.13
TRIO-205ENST00000503399 TTC6Q86TZ1 520 aa15.86■□□□□ 0.13
TRIO-205ENST00000503399 CERS3Q8IU89 383 aa15.86■□□□□ 0.13
TRIO-205ENST00000503399 TRPV1Q8NER1 839 aa15.86■□□□□ 0.13
TRIO-205ENST00000503399 SSH3Q8TE77 659 aa15.86■□□□□ 0.13
TRIO-205ENST00000503399 PRDM5Q9NQX1 630 aaPredicted RBP15.86■□□□□ 0.13
TRIO-205ENST00000503399 LAMA2P24043 3122 aaKnown RBP15.85■□□□□ 0.13
TRIO-205ENST00000503399 POTEB2H3BUK9 544 aa15.85■□□□□ 0.13
TRIO-205ENST00000503399 IGSF3O75054 1194 aa15.85■□□□□ 0.13
TRIO-205ENST00000503399 HOXC6P09630 235 aa15.85■□□□□ 0.13
TRIO-205ENST00000503399 ATP8B2P98198 1209 aa15.85■□□□□ 0.13
TRIO-205ENST00000503399 FAM109BQ6ICB4 259 aaPredicted RBP15.85■□□□□ 0.13
TRIO-205ENST00000503399 KBTBD13C9JR72 458 aa15.84■□□□□ 0.13
TRIO-205ENST00000503399 MPHOSPH10O00566 681 aaKnown RBP15.84■□□□□ 0.13
TRIO-205ENST00000503399 POLR3DP05423 398 aaPredicted RBP15.84■□□□□ 0.13
TRIO-205ENST00000503399 CYBAP13498 195 aa15.84■□□□□ 0.13
TRIO-205ENST00000503399 ADORA2AP29274 412 aa15.84■□□□□ 0.13
TRIO-205ENST00000503399 SHMT1P34896 483 aa15.84■□□□□ 0.13
TRIO-205ENST00000503399 MAP3K12Q12852 859 aa15.84■□□□□ 0.13
TRIO-205ENST00000503399 SEPT2Q15019 361 aa15.84■□□□□ 0.13
TRIO-205ENST00000503399 ZKSCAN2Q63HK3 967 aa15.84■□□□□ 0.13
TRIO-205ENST00000503399 LBX2Q6XYB7 198 aa15.84■□□□□ 0.13
TRIO-205ENST00000503399 TANGO6Q9C0B7 1094 aa15.84■□□□□ 0.13
TRIO-205ENST00000503399 ANTXR1Q9H6X2 564 aa15.84■□□□□ 0.13
TRIO-205ENST00000503399 LTBP2Q14767 1821 aa15.84■□□□□ 0.13
TRIO-205ENST00000503399 NAV1Q8NEY1 1877 aa15.83■□□□□ 0.12
TRIO-205ENST00000503399 PLCD1P51178 756 aa15.83■□□□□ 0.12
TRIO-205ENST00000503399 ARRDC4Q8NCT1 418 aa15.83■□□□□ 0.12
TRIO-205ENST00000503399 EAF2Q96CJ1 260 aaPredicted RBP15.83■□□□□ 0.12
TRIO-205ENST00000503399 MOV10L1Q9BXT6 1211 aaKnown RBP15.83■□□□□ 0.12
TRIO-205ENST00000503399 GUCY1A2P33402 732 aa15.82■□□□□ 0.12
TRIO-205ENST00000503399 PLS1Q14651 629 aa15.82■□□□□ 0.12
TRIO-205ENST00000503399 SHHQ15465 462 aa15.82■□□□□ 0.12
TRIO-205ENST00000503399 SAMD1Q6SPF0 538 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms