RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TRIM32Q13049 653 aa19.63■□□□□ 0.73
SCLT1-204ENST00000503215 GPRC5AQ8NFJ5 357 aa19.63■□□□□ 0.73
SCLT1-204ENST00000503215 C12orf42Q96LP6 360 aa19.63■□□□□ 0.73
SCLT1-204ENST00000503215 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.63■□□□□ 0.73
SCLT1-204ENST00000503215 KIAA1683Q9H0B3 1180 aa19.63■□□□□ 0.73
SCLT1-204ENST00000503215 PUS7LQ9H0K6 701 aaKnown RBP19.63■□□□□ 0.73
SCLT1-204ENST00000503215 ECHDC1Q9NTX5 307 aa19.63■□□□□ 0.73
SCLT1-204ENST00000503215 NAV1Q8NEY1 1877 aa19.63■□□□□ 0.73
SCLT1-204ENST00000503215 UBE3CQ15386 1083 aa19.62■□□□□ 0.73
SCLT1-204ENST00000503215 UBE2Q1Q7Z7E8 422 aa19.62■□□□□ 0.73
SCLT1-204ENST00000503215 CLEC10AQ8IUN9 316 aa19.62■□□□□ 0.73
SCLT1-204ENST00000503215 U2AF1L4Q8WU68 220 aaKnown RBP19.62■□□□□ 0.73
SCLT1-204ENST00000503215 PAGR1Q9BTK6 254 aa19.62■□□□□ 0.73
SCLT1-204ENST00000503215 PORCNQ9H237 461 aa19.62■□□□□ 0.73
SCLT1-204ENST00000503215 CABP5Q9NP86 173 aa19.62■□□□□ 0.73
SCLT1-204ENST00000503215 MPHOSPH10O00566 681 aaKnown RBP19.61■□□□□ 0.73
SCLT1-204ENST00000503215 CNMDO75829 334 aa19.61■□□□□ 0.73
SCLT1-204ENST00000503215 VCAM1P19320 739 aa19.61■□□□□ 0.73
SCLT1-204ENST00000503215 OTUD7AQ8TE49 926 aaPredicted RBP19.61■□□□□ 0.73
SCLT1-204ENST00000503215 USP17L15C9J2P7 530 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 USP17L13C9JLJ4 530 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 USP17L12C9JPN9 530 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 USP17L11C9JVI0 530 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 USP17L21D6R901 530 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 USP17L18D6R9N7 530 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 USP17L22D6RA61 530 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 USP17L17D6RBQ6 530 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 USP17L19D6RCP7 530 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 USP17L20D6RJB6 530 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 AKR1B1P15121 316 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 CYP2B6P20813 491 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 ERVK-9P63128 1117 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 ERVK-24P63145 666 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 USP17L24Q0WX57 530 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 KIAA1755Q5JYT7 1200 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 CATSPERGQ6ZRH7 1159 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 SIAH1Q8IUQ4 282 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 DEFB118Q96PH6 123 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 ATP8A2Q9NTI2 1148 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 SLC4A4Q9Y6R1 1079 aa19.6■□□□□ 0.73
SCLT1-204ENST00000503215 SGPL1O95470 568 aa19.59■□□□□ 0.73
SCLT1-204ENST00000503215 RRP1P56182 461 aaKnown RBP19.59■□□□□ 0.73
SCLT1-204ENST00000503215 C12orf60Q5U649 245 aa19.59■□□□□ 0.73
SCLT1-204ENST00000503215 BAZ2AQ9UIF9 1905 aaKnown RBP19.59■□□□□ 0.73
SCLT1-204ENST00000503215 PLXNB2O15031 1838 aa19.59■□□□□ 0.73
SCLT1-204ENST00000503215 CEP290O15078 2479 aa19.59■□□□□ 0.73
SCLT1-204ENST00000503215 USP14P54578 494 aa19.58■□□□□ 0.73
SCLT1-204ENST00000503215 NKX2-3Q8TAU0 364 aa19.58■□□□□ 0.73
SCLT1-204ENST00000503215 TRIB2Q92519 343 aa19.58■□□□□ 0.73
SCLT1-204ENST00000503215 RPAP3Q9H6T3 665 aaPredicted RBP19.58■□□□□ 0.73
SCLT1-204ENST00000503215 PAK6Q9NQU5 681 aaPredicted RBP19.58■□□□□ 0.73
SCLT1-204ENST00000503215 H0YGN5 161 aa19.57■□□□□ 0.72
SCLT1-204ENST00000503215 CDK8P49336 464 aa19.57■□□□□ 0.72
SCLT1-204ENST00000503215 CTR9Q6PD62 1173 aa19.57■□□□□ 0.72
SCLT1-204ENST00000503215 KBTBD3Q8NAB2 608 aa19.57■□□□□ 0.72
SCLT1-204ENST00000503215 OSBP2Q969R2 916 aa19.57■□□□□ 0.72
SCLT1-204ENST00000503215 STRBPQ96SI9 672 aaKnown RBP19.57■□□□□ 0.72
SCLT1-204ENST00000503215 CRBNQ96SW2 442 aa19.57■□□□□ 0.72
SCLT1-204ENST00000503215 BTBD7Q9P203 1132 aa19.57■□□□□ 0.72
SCLT1-204ENST00000503215 TFRCP02786 760 aaKnown RBP19.57■□□□□ 0.72
SCLT1-204ENST00000503215 GPR142Q7Z601 462 aa19.57■□□□□ 0.72
SCLT1-204ENST00000503215 USP6NLQ92738 828 aa19.57■□□□□ 0.72
SCLT1-204ENST00000503215 YTHDC1Q96MU7 727 aaKnown RBP19.57■□□□□ 0.72
SCLT1-204ENST00000503215 SWAP70Q9UH65 585 aa19.57■□□□□ 0.72
SCLT1-204ENST00000503215 RABGAP1Q9Y3P9 1069 aa19.57■□□□□ 0.72
SCLT1-204ENST00000503215 SPDYE16A6NNV3 312 aaPredicted RBP19.56■□□□□ 0.72
SCLT1-204ENST00000503215 FARP2O94887 1054 aaPredicted RBP19.56■□□□□ 0.72
SCLT1-204ENST00000503215 HMGCRP04035 888 aa19.56■□□□□ 0.72
SCLT1-204ENST00000503215 MAPK4P31152 587 aa19.56■□□□□ 0.72
SCLT1-204ENST00000503215 CCL14Q16627 93 aa19.56■□□□□ 0.72
SCLT1-204ENST00000503215 MORN1Q5T089 497 aa19.56■□□□□ 0.72
SCLT1-204ENST00000503215 ZSCAN25Q6NSZ9 544 aa19.56■□□□□ 0.72
SCLT1-204ENST00000503215 TMEM179Q6ZVK1 233 aa19.56■□□□□ 0.72
SCLT1-204ENST00000503215 NUDT12Q9BQG2 462 aa19.56■□□□□ 0.72
SCLT1-204ENST00000503215 CRISPLD2Q9H0B8 497 aa19.56■□□□□ 0.72
SCLT1-204ENST00000503215 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.56■□□□□ 0.72
SCLT1-204ENST00000503215 MYH7P12883 1935 aa19.55■□□□□ 0.72
SCLT1-204ENST00000503215 GSG1L2A8MUP6 293 aa19.55■□□□□ 0.72
SCLT1-204ENST00000503215 C16orf86Q6ZW13 317 aa19.55■□□□□ 0.72
SCLT1-204ENST00000503215 PLEKHH3Q7Z736 793 aa19.55■□□□□ 0.72
SCLT1-204ENST00000503215 STK11IPQ8N1F8 1099 aa19.55■□□□□ 0.72
SCLT1-204ENST00000503215 GTF3C2Q8WUA4 911 aaPredicted RBP19.55■□□□□ 0.72
SCLT1-204ENST00000503215 DPF3Q92784 378 aa19.55■□□□□ 0.72
SCLT1-204ENST00000503215 M0R2C6 588 aa19.54■□□□□ 0.72
SCLT1-204ENST00000503215 RNF113AO15541 343 aaKnown RBP19.54■□□□□ 0.72
SCLT1-204ENST00000503215 CCAR1Q8IX12 1150 aaKnown RBP19.54■□□□□ 0.72
SCLT1-204ENST00000503215 SPICE1Q8N0Z3 855 aa19.54■□□□□ 0.72
SCLT1-204ENST00000503215 PI4K2BQ8TCG2 481 aa19.54■□□□□ 0.72
SCLT1-204ENST00000503215 DIS3LQ8TF46 1054 aaKnown RBP19.54■□□□□ 0.72
SCLT1-204ENST00000503215 XRCC5P13010 732 aaKnown RBP19.53■□□□□ 0.72
SCLT1-204ENST00000503215 ICA1Q05084 483 aa19.53■□□□□ 0.72
SCLT1-204ENST00000503215 HABP4Q5JVS0 413 aaKnown RBP19.53■□□□□ 0.72
SCLT1-204ENST00000503215 LBX2Q6XYB7 198 aa19.53■□□□□ 0.72
SCLT1-204ENST00000503215 SOCS4Q8WXH5 440 aa19.53■□□□□ 0.72
SCLT1-204ENST00000503215 APPBP2Q92624 585 aa19.53■□□□□ 0.72
SCLT1-204ENST00000503215 GPATCH3Q96I76 525 aa19.53■□□□□ 0.72
SCLT1-204ENST00000503215 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.53■□□□□ 0.72
SCLT1-204ENST00000503215 PRKAR2AP13861 404 aaKnown RBP19.52■□□□□ 0.72
SCLT1-204ENST00000503215 MAP3K21Q5TCX8 1036 aa19.52■□□□□ 0.72
SCLT1-204ENST00000503215 WDR78Q5VTH9 848 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms