RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 SPON2Q9BUD6 331 aa7.36□□□□□ -1.23
CPNE4-203ENST00000503204 NT5C1AQ9BXI3 368 aa7.36□□□□□ -1.23
CPNE4-203ENST00000503204 BRMS1Q9HCU9 246 aa7.36□□□□□ -1.23
CPNE4-203ENST00000503204 ADGRE2Q9UHX3 823 aa7.36□□□□□ -1.23
CPNE4-203ENST00000503204 CEP131Q9UPN4 1083 aa7.36□□□□□ -1.23
CPNE4-203ENST00000503204 CDK11AQ9UQ88 783 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-203ENST00000503204 CAPN6Q9Y6Q1 641 aa7.36□□□□□ -1.23
CPNE4-203ENST00000503204 CNTNAP4Q9C0A0 1308 aa7.35□□□□□ -1.23
CPNE4-203ENST00000503204 PRR33A8MZF0 331 aa7.35□□□□□ -1.23
CPNE4-203ENST00000503204 UPK3BL1B0FP48 263 aa7.35□□□□□ -1.23
CPNE4-203ENST00000503204 UPK3BL2E5RIL1 263 aa7.35□□□□□ -1.23
CPNE4-203ENST00000503204 ATE1O95260 518 aa7.35□□□□□ -1.23
CPNE4-203ENST00000503204 CD8BP10966 210 aa7.35□□□□□ -1.23
CPNE4-203ENST00000503204 FUT4P22083 530 aa7.35□□□□□ -1.23
CPNE4-203ENST00000503204 CRKP46108 304 aa7.35□□□□□ -1.23
CPNE4-203ENST00000503204 ANGEL2Q5VTE6 544 aaKnown RBP7.35□□□□□ -1.23
CPNE4-203ENST00000503204 UBP1Q9NZI7 540 aa7.35□□□□□ -1.23
CPNE4-203ENST00000503204 KLHL3Q9UH77 587 aa7.35□□□□□ -1.23
CPNE4-203ENST00000503204 PCDHB14Q9Y5E9 798 aa7.35□□□□□ -1.23
CPNE4-203ENST00000503204 PITPNM2Q9BZ72 1349 aa7.34□□□□□ -1.23
CPNE4-203ENST00000503204 CBX7O95931 251 aa7.34□□□□□ -1.23
CPNE4-203ENST00000503204 PLCL1Q15111 1095 aa7.34□□□□□ -1.23
CPNE4-203ENST00000503204 SEZ6Q53EL9 994 aa7.34□□□□□ -1.23
CPNE4-203ENST00000503204 MCTP1Q6DN14 999 aa7.34□□□□□ -1.23
CPNE4-203ENST00000503204 REXO1Q8N1G1 1221 aaKnown RBP7.34□□□□□ -1.23
CPNE4-203ENST00000503204 PIWIL2Q8TC59 973 aaKnown RBP7.34□□□□□ -1.23
CPNE4-203ENST00000503204 PPP1R13LQ8WUF5 828 aa7.34□□□□□ -1.23
CPNE4-203ENST00000503204 CCDC74BQ96LY2 380 aa7.34□□□□□ -1.23
CPNE4-203ENST00000503204 EHMT1Q9H9B1 1298 aa7.34□□□□□ -1.23
CPNE4-203ENST00000503204 COL17A1Q9UMD9 1497 aaPredicted RBP7.34□□□□□ -1.23
CPNE4-203ENST00000503204 CHURC1-FNTBB4DL54 471 aa7.33□□□□□ -1.24
CPNE4-203ENST00000503204 ZNF165P49910 485 aa7.33□□□□□ -1.24
CPNE4-203ENST00000503204 ZNF394Q53GI3 561 aa7.33□□□□□ -1.24
CPNE4-203ENST00000503204 CBLL1Q75N03 491 aa7.33□□□□□ -1.24
CPNE4-203ENST00000503204 THAP5Q7Z6K1 395 aa7.33□□□□□ -1.24
CPNE4-203ENST00000503204 SLITRK4Q8IW52 837 aa7.33□□□□□ -1.24
CPNE4-203ENST00000503204 NKD1Q969G9 470 aa7.33□□□□□ -1.24
CPNE4-203ENST00000503204 GMIPQ9P107 970 aa7.33□□□□□ -1.24
CPNE4-203ENST00000503204 DNAJA2O60884 412 aa7.32□□□□□ -1.24
CPNE4-203ENST00000503204 CD96P40200 585 aa7.32□□□□□ -1.24
CPNE4-203ENST00000503204 TNNI2P48788 182 aa7.32□□□□□ -1.24
CPNE4-203ENST00000503204 IKZF1Q13422 519 aa7.32□□□□□ -1.24
CPNE4-203ENST00000503204 CDKAL1Q5VV42 579 aa7.32□□□□□ -1.24
CPNE4-203ENST00000503204 PHACTR4Q8IZ21 702 aa7.32□□□□□ -1.24
CPNE4-203ENST00000503204 EAF1Q96JC9 268 aaPredicted RBP7.32□□□□□ -1.24
CPNE4-203ENST00000503204 HSPA12BQ96MM6 686 aa7.32□□□□□ -1.24
CPNE4-203ENST00000503204 USP35Q9P2H5 1018 aa7.32□□□□□ -1.24
CPNE4-203ENST00000503204 PCDHGB7Q9Y5F8 929 aa7.32□□□□□ -1.24
CPNE4-203ENST00000503204 ST14Q9Y5Y6 855 aa7.32□□□□□ -1.24
CPNE4-203ENST00000503204 SLC22A31A6NKX4 558 aa7.31□□□□□ -1.24
CPNE4-203ENST00000503204 MCM4P33991 863 aa7.31□□□□□ -1.24
CPNE4-203ENST00000503204 TNK2Q07912 1038 aa7.31□□□□□ -1.24
CPNE4-203ENST00000503204 ZNF792Q3KQV3 632 aa7.31□□□□□ -1.24
CPNE4-203ENST00000503204 GK5Q6ZS86 529 aa7.31□□□□□ -1.24
CPNE4-203ENST00000503204 RNF141Q8WVD5 230 aa7.31□□□□□ -1.24
CPNE4-203ENST00000503204 SEMA3GQ9NS98 782 aa7.31□□□□□ -1.24
CPNE4-203ENST00000503204 KIAA1522Q9P206 1035 aaPredicted RBP7.31□□□□□ -1.24
CPNE4-203ENST00000503204 DDX41Q9UJV9 622 aaKnown RBP7.31□□□□□ -1.24
CPNE4-203ENST00000503204 UNCXA6NJT0 531 aa7.3□□□□□ -1.24
CPNE4-203ENST00000503204 H3BS24 57 aa7.3□□□□□ -1.24
CPNE4-203ENST00000503204 RAG1P15918 1043 aa7.3□□□□□ -1.24
CPNE4-203ENST00000503204 TAL1P17542 331 aaPredicted RBP7.3□□□□□ -1.24
CPNE4-203ENST00000503204 LRRFIP1Q32MZ4 808 aaKnown RBP7.3□□□□□ -1.24
CPNE4-203ENST00000503204 ARSHQ5FYA8 562 aa7.3□□□□□ -1.24
CPNE4-203ENST00000503204 SLC23A3Q6PIS1 610 aa7.3□□□□□ -1.24
CPNE4-203ENST00000503204 ZNF654Q8IZM8 581 aa7.3□□□□□ -1.24
CPNE4-203ENST00000503204 BAHD1Q8TBE0 780 aaPredicted RBP7.3□□□□□ -1.24
CPNE4-203ENST00000503204 PI4K2BQ8TCG2 481 aa7.3□□□□□ -1.24
CPNE4-203ENST00000503204 ASPNQ9BXN1 380 aa7.3□□□□□ -1.24
CPNE4-203ENST00000503204 LMCD1Q9NZU5 365 aa7.3□□□□□ -1.24
CPNE4-203ENST00000503204 KCNH3Q9ULD8 1083 aa7.3□□□□□ -1.24
CPNE4-203ENST00000503204 RGS13O14921 159 aa7.29□□□□□ -1.24
CPNE4-203ENST00000503204 GBP1P32455 592 aa7.29□□□□□ -1.24
CPNE4-203ENST00000503204 CHMP4BP1P59074 171 aa7.29□□□□□ -1.24
CPNE4-203ENST00000503204 RACK1P63244 317 aaKnown RBP7.29□□□□□ -1.24
CPNE4-203ENST00000503204 CLCQ05315 142 aa7.29□□□□□ -1.24
CPNE4-203ENST00000503204 CDCP2Q5VXM1 449 aa7.29□□□□□ -1.24
CPNE4-203ENST00000503204 OVOS1Q6IE37 1185 aa7.29□□□□□ -1.24
CPNE4-203ENST00000503204 METTL16Q86W50 562 aaKnown RBP7.29□□□□□ -1.24
CPNE4-203ENST00000503204 Q96M66 194 aa7.29□□□□□ -1.24
CPNE4-203ENST00000503204 KREMEN1Q96MU8 473 aa7.29□□□□□ -1.24
CPNE4-203ENST00000503204 KIF2CQ99661 725 aa7.29□□□□□ -1.24
CPNE4-203ENST00000503204 ATP13A1Q9HD20 1204 aa7.29□□□□□ -1.24
CPNE4-203ENST00000503204 IGSF5Q9NSI5 407 aa7.29□□□□□ -1.24
CPNE4-203ENST00000503204 ZP2Q05996 745 aa7.28□□□□□ -1.24
CPNE4-203ENST00000503204 TMEM40Q8WWA1 233 aa7.28□□□□□ -1.24
CPNE4-203ENST00000503204 TRIT1Q9H3H1 467 aaKnown RBP7.28□□□□□ -1.24
CPNE4-203ENST00000503204 CNNM2Q9H8M5 875 aa7.28□□□□□ -1.24
CPNE4-203ENST00000503204 MBNL3Q9NUK0 354 aaKnown RBP7.28□□□□□ -1.24
CPNE4-203ENST00000503204 MEIS3P2A8K0S8 358 aa7.27□□□□□ -1.25
CPNE4-203ENST00000503204 RNASE1P07998 156 aaKnown RBP7.27□□□□□ -1.25
CPNE4-203ENST00000503204 IMPDH2P12268 514 aa7.27□□□□□ -1.25
CPNE4-203ENST00000503204 CCNFP41002 786 aa7.27□□□□□ -1.25
CPNE4-203ENST00000503204 HDLBPQ00341 1268 aaKnown RBP7.27□□□□□ -1.25
CPNE4-203ENST00000503204 NLRC3Q7RTR2 1065 aa7.27□□□□□ -1.25
CPNE4-203ENST00000503204 TMPRSS7Q7RTY8 843 aa7.27□□□□□ -1.25
CPNE4-203ENST00000503204 DTWD2Q8NBA8 298 aa7.27□□□□□ -1.25
CPNE4-203ENST00000503204 UBE2FQ969M7 185 aa7.27□□□□□ -1.25
CPNE4-203ENST00000503204 ATG4CQ96DT6 458 aa7.27□□□□□ -1.25
CPNE4-203ENST00000503204 GPR62Q9BZJ7 368 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms